RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 Q8N7P7 452 aa1.61□□□□□ -2.15
CCDC30-201ENST00000340612 RMI2Q96E14 147 aa1.61□□□□□ -2.15
CCDC30-201ENST00000340612 LRRK1Q38SD2 2015 aa1.61□□□□□ -2.15
CCDC30-201ENST00000340612 PLXNB2O15031 1838 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 COL11A1P12107 1806 aaPredicted RBP1.6□□□□□ -2.15
CCDC30-201ENST00000340612 IGHV6-1A0A0B4J1U7 121 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 IGKV3D-7A0A0C4DH55 119 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 IGKV1-12A0A0C4DH73 117 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 NTN3O00634 580 aaPredicted RBP1.6□□□□□ -2.15
CCDC30-201ENST00000340612 PSPHP1O15172 72 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 IGKV1D-12P01611 117 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 IGHV3-30P01768 117 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 BAALC-AS2P0C853 105 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 IGHV3-30-5P0DP03 117 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 IAPPP10997 89 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 MIFP14174 115 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 TFF3Q07654 80 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 PLGLAQ15195 96 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 C15orf32Q32M92 178 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 Q6ZS52 159 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 VMO1Q7Z5L0 202 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 SPTSSBQ8NFR3 76 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 TMEM263Q8WUH6 116 aaKnown RBP1.6□□□□□ -2.15
CCDC30-201ENST00000340612 C1orf147Q96MC9 270 aaPredicted RBP1.6□□□□□ -2.15
CCDC30-201ENST00000340612 SNURFQ9Y675 71 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 SHANK1Q9Y566 2161 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 TRAV7A0A075B6U4 112 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 TRAV23DV6A0A075B6W5 121 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 TRAV22A0A0B4J277 110 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 IGHV3OR16-9A0A0B4J2B5 98 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 PLNP26678 52 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 RPL28P46779 137 aaKnown RBP1.6□□□□□ -2.15
CCDC30-201ENST00000340612 RPS21P63220 83 aaKnown RBP1.6□□□□□ -2.15
CCDC30-201ENST00000340612 CXCL6P80162 114 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 MRPL51Q4U2R6 128 aaKnown RBP1.6□□□□□ -2.15
CCDC30-201ENST00000340612 SPANXN5Q5MJ07 72 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 C9orf66Q5T8R8 295 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 PATE2Q6UY27 113 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 Q8N377 158 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 PHLDA3Q9Y5J5 127 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 FN1P02751 2386 aaKnown RBP1.6□□□□□ -2.15
CCDC30-201ENST00000340612 ARHGAP32A7KAX9 2087 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 CACNA1CQ13936 2221 aa1.6□□□□□ -2.15
CCDC30-201ENST00000340612 OTOGLQ3ZCN5 2332 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 DNAJC13O75165 2243 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 IGHV1OR21-1A0A087WYE8 117 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 IGHV1-69DA0A0B4J2H0 117 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 A0A0J9YY99 117 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 ZNF815PA8K554 130 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 C12orf77C9JDV5 145 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 H7C2G1 150 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 BCE1O60756 84 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 IGHV3-13P01766 116 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 PRM2P04554 102 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 CD28P10747 220 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 COX6B1P14854 86 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 S100A4P26447 101 aaKnown RBP1.59□□□□□ -2.15
CCDC30-201ENST00000340612 RPS27P42677 84 aaKnown RBP1.59□□□□□ -2.15
CCDC30-201ENST00000340612 LMO4P61968 165 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 Q1RN00 199 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 CLLU1OSQ5K130 101 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.59□□□□□ -2.15
CCDC30-201ENST00000340612 CHCHD10Q8WYQ3 142 aaPredicted RBP1.59□□□□□ -2.15
CCDC30-201ENST00000340612 GFRA4Q9GZZ7 299 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 NDUFA12Q9UI09 145 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 ZGRF1Q86YA3 2104 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 SPAG17Q6Q759 2223 aa1.59□□□□□ -2.15
CCDC30-201ENST00000340612 IGLV3-9A0A075B6K5 115 aa1.59□□□□□ -2.16
CCDC30-201ENST00000340612 IGHV3-16A0A0C4DH30 117 aa1.59□□□□□ -2.16
CCDC30-201ENST00000340612 A0A0J9YWU9 116 aa1.59□□□□□ -2.16
CCDC30-201ENST00000340612 SDHAF1A6NFY7 115 aa1.59□□□□□ -2.16
CCDC30-201ENST00000340612 KRTAP16-1A8MUX0 517 aa1.59□□□□□ -2.16
CCDC30-201ENST00000340612 GNRH2O43555 120 aa1.59□□□□□ -2.16
CCDC30-201ENST00000340612 TFF1P04155 84 aa1.59□□□□□ -2.16
CCDC30-201ENST00000340612 EDDM3BP56851 147 aa1.59□□□□□ -2.16
CCDC30-201ENST00000340612 FBXL19-AS1Q494R0 122 aa1.59□□□□□ -2.16
CCDC30-201ENST00000340612 C2orf83Q53S99 150 aa1.59□□□□□ -2.16
CCDC30-201ENST00000340612 ORMDL3Q8N138 153 aa1.59□□□□□ -2.16
CCDC30-201ENST00000340612 Q8N6K4 173 aa1.59□□□□□ -2.16
CCDC30-201ENST00000340612 TMEM14AQ9Y6G1 99 aa1.59□□□□□ -2.16
CCDC30-201ENST00000340612 MED12Q93074 2177 aa1.59□□□□□ -2.16
CCDC30-201ENST00000340612 MUC4Q99102 2169 aa1.59□□□□□ -2.16
CCDC30-201ENST00000340612 LRP4O75096 1905 aa1.58□□□□□ -2.16
CCDC30-201ENST00000340612 FREM3P0C091 2139 aa1.58□□□□□ -2.16
CCDC30-201ENST00000340612 SVILO95425 2214 aa1.58□□□□□ -2.16
CCDC30-201ENST00000340612 hDV103S1A0JD37 113 aa1.58□□□□□ -2.16
CCDC30-201ENST00000340612 LINC01546A6NGU7 62 aa1.58□□□□□ -2.16
CCDC30-201ENST00000340612 HCG22E2RYF7 251 aa1.58□□□□□ -2.16
CCDC30-201ENST00000340612 NDUFA3O95167 84 aa1.58□□□□□ -2.16
CCDC30-201ENST00000340612 GAS8-AS1O95177 125 aa1.58□□□□□ -2.16
CCDC30-201ENST00000340612 IGHV3-9P01782 118 aa1.58□□□□□ -2.16
CCDC30-201ENST00000340612 IGHV4-34P06331 123 aa1.58□□□□□ -2.16
CCDC30-201ENST00000340612 COX6CP09669 75 aa1.58□□□□□ -2.16
CCDC30-201ENST00000340612 BSPH1Q075Z2 132 aa1.58□□□□□ -2.16
CCDC30-201ENST00000340612 DYNLRB2Q8TF09 96 aa1.58□□□□□ -2.16
CCDC30-201ENST00000340612 TMEM141Q96I45 108 aa1.58□□□□□ -2.16
CCDC30-201ENST00000340612 RPP21Q9H633 154 aaKnown RBP1.58□□□□□ -2.16
CCDC30-201ENST00000340612 LINC00574Q9H8X3 128 aa1.58□□□□□ -2.16
CCDC30-201ENST00000340612 DHRS4-AS1Q9P1J3 65 aa1.58□□□□□ -2.16
CCDC30-201ENST00000340612 U3KQK5 164 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 495.9 ms