RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 RPS20P60866 119 aaKnown RBP10.01□□□□□ -0.81
LINC01116-202ENST00000339037 GAGE6Q13070 117 aa10.01□□□□□ -0.81
LINC01116-202ENST00000339037 KRTAP26-1Q6PEX3 210 aa10.01□□□□□ -0.81
LINC01116-202ENST00000339037 SMIM12Q96EX1 92 aa10.01□□□□□ -0.81
LINC01116-202ENST00000339037 MED9Q9NWA0 146 aa10.01□□□□□ -0.81
LINC01116-202ENST00000339037 M0QY20 66 aa10□□□□□ -0.81
LINC01116-202ENST00000339037 IFNA1P01562 189 aa10□□□□□ -0.81
LINC01116-202ENST00000339037 SUMO4Q6EEV6 95 aa10□□□□□ -0.81
LINC01116-202ENST00000339037 IGLV10-54A0A075B6I4 117 aa9.99□□□□□ -0.81
LINC01116-202ENST00000339037 P01737 135 aa9.99□□□□□ -0.81
LINC01116-202ENST00000339037 MT1HL1P0DM35 61 aa9.99□□□□□ -0.81
LINC01116-202ENST00000339037 CNBPP62633 177 aaKnown RBP9.99□□□□□ -0.81
LINC01116-202ENST00000339037 CACNG7P62955 275 aa9.99□□□□□ -0.81
LINC01116-202ENST00000339037 IQCJQ1A5X6 159 aa9.99□□□□□ -0.81
LINC01116-202ENST00000339037 SLC51BQ86UW2 128 aa9.99□□□□□ -0.81
LINC01116-202ENST00000339037 TNXBP22105 4242 aa9.99□□□□□ -0.81
LINC01116-202ENST00000339037 hDV102S1A0JD36 115 aa9.98□□□□□ -0.81
LINC01116-202ENST00000339037 REG3AQ06141 175 aa9.98□□□□□ -0.81
LINC01116-202ENST00000339037 LYZL1Q6UWQ5 148 aa9.98□□□□□ -0.81
LINC01116-202ENST00000339037 Q6ZRU5 148 aa9.98□□□□□ -0.81
LINC01116-202ENST00000339037 IGHV1-24A0A0C4DH33 117 aa9.97□□□□□ -0.81
LINC01116-202ENST00000339037 H7C1H1 209 aa9.97□□□□□ -0.81
LINC01116-202ENST00000339037 CIRBPQ14011 172 aaKnown RBP9.97□□□□□ -0.81
LINC01116-202ENST00000339037 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.96□□□□□ -0.82
LINC01116-202ENST00000339037 XKRY2A2RUG3 117 aa9.96□□□□□ -0.82
LINC01116-202ENST00000339037 F2Z2F3 143 aa9.96□□□□□ -0.82
LINC01116-202ENST00000339037 CTRLP40313 264 aa9.96□□□□□ -0.82
LINC01116-202ENST00000339037 NKX2-5P52952 324 aaPredicted RBP9.96□□□□□ -0.82
LINC01116-202ENST00000339037 NUDT10Q8NFP7 164 aa9.96□□□□□ -0.82
LINC01116-202ENST00000339037 NUDT11Q96G61 164 aa9.96□□□□□ -0.82
LINC01116-202ENST00000339037 IGHV3-64A0A075B6Q5 118 aa9.95□□□□□ -0.82
LINC01116-202ENST00000339037 TRAV8-4A0A0B4J246 113 aa9.95□□□□□ -0.82
LINC01116-202ENST00000339037 K7EN84 100 aa9.95□□□□□ -0.82
LINC01116-202ENST00000339037 TRGC1P0CF51 173 aa9.95□□□□□ -0.82
LINC01116-202ENST00000339037 NTF3P20783 257 aa9.95□□□□□ -0.82
LINC01116-202ENST00000339037 RASL11AQ6T310 242 aa9.95□□□□□ -0.82
LINC01116-202ENST00000339037 Q6ZNX1 250 aa9.95□□□□□ -0.82
LINC01116-202ENST00000339037 C9orf62Q8N4C0 152 aa9.95□□□□□ -0.82
LINC01116-202ENST00000339037 DPH3Q96FX2 82 aa9.95□□□□□ -0.82
LINC01116-202ENST00000339037 RNASE7Q9H1E1 156 aaKnown RBP9.95□□□□□ -0.82
LINC01116-202ENST00000339037 DPH3P1Q9H4G8 78 aa9.95□□□□□ -0.82
LINC01116-202ENST00000339037 BIN3Q9NQY0 253 aa9.95□□□□□ -0.82
LINC01116-202ENST00000339037 C20orf203Q8NBC4 194 aa9.94□□□□□ -0.82
LINC01116-202ENST00000339037 RNF185Q96GF1 192 aa9.94□□□□□ -0.82
LINC01116-202ENST00000339037 A0A087WYN8 130 aa9.93□□□□□ -0.82
LINC01116-202ENST00000339037 CHTF8P0CG12 524 aa9.93□□□□□ -0.82
LINC01116-202ENST00000339037 TAGLN2P37802 199 aaKnown RBP9.93□□□□□ -0.82
LINC01116-202ENST00000339037 OCC1Q8TAD7 63 aa9.93□□□□□ -0.82
LINC01116-202ENST00000339037 SPACA4Q8TDM5 124 aa9.93□□□□□ -0.82
LINC01116-202ENST00000339037 TMEM243Q9BU79 118 aa9.93□□□□□ -0.82
LINC01116-202ENST00000339037 CNFNQ9BYD5 112 aa9.93□□□□□ -0.82
LINC01116-202ENST00000339037 RPP21Q9H633 154 aaKnown RBP9.93□□□□□ -0.82
LINC01116-202ENST00000339037 NIT2Q9NQR4 276 aa9.93□□□□□ -0.82
LINC01116-202ENST00000339037 A0A1B0GUV1 79 aa9.92□□□□□ -0.82
LINC01116-202ENST00000339037 SLPIP03973 132 aa9.92□□□□□ -0.82
LINC01116-202ENST00000339037 ALKAL2Q6UX46 152 aa9.92□□□□□ -0.82
LINC01116-202ENST00000339037 AKAP14Q86UN6 197 aa9.92□□□□□ -0.82
LINC01116-202ENST00000339037 IGLV4-60A0A075B6I1 120 aa9.91□□□□□ -0.82
LINC01116-202ENST00000339037 TWIST1Q15672 202 aa9.91□□□□□ -0.82
LINC01116-202ENST00000339037 WDR73Q6P4I2 378 aa9.91□□□□□ -0.82
LINC01116-202ENST00000339037 PGLYRP4Q96LB8 373 aa9.91□□□□□ -0.82
LINC01116-202ENST00000339037 GFRA4Q9GZZ7 299 aa9.91□□□□□ -0.82
LINC01116-202ENST00000339037 TRAV26-2A0A0B4J265 109 aa9.9□□□□□ -0.82
LINC01116-202ENST00000339037 GATD1Q8NB37 220 aa9.9□□□□□ -0.82
LINC01116-202ENST00000339037 GTSF1Q8WW33 167 aa9.9□□□□□ -0.82
LINC01116-202ENST00000339037 C7orf33Q8WU49 177 aa9.89□□□□□ -0.83
LINC01116-202ENST00000339037 PLAC8Q9NZF1 115 aa9.89□□□□□ -0.83
LINC01116-202ENST00000339037 TMEM250H0YL14 139 aa9.88□□□□□ -0.83
LINC01116-202ENST00000339037 PHOX2AO14813 284 aa9.88□□□□□ -0.83
LINC01116-202ENST00000339037 UBE2L6O14933 153 aa9.88□□□□□ -0.83
LINC01116-202ENST00000339037 AMTP48728 403 aa9.88□□□□□ -0.83
LINC01116-202ENST00000339037 FOXA3P55318 350 aaPredicted RBP9.88□□□□□ -0.83
LINC01116-202ENST00000339037 LYPD6BQ8NI32 183 aa9.88□□□□□ -0.83
LINC01116-202ENST00000339037 BLOC1S1P78537 153 aa9.87□□□□□ -0.83
LINC01116-202ENST00000339037 COTL1Q14019 142 aa9.87□□□□□ -0.83
LINC01116-202ENST00000339037 RPL39LQ96EH5 51 aaKnown RBP9.87□□□□□ -0.83
LINC01116-202ENST00000339037 GATCO43716 136 aaKnown RBP9.86□□□□□ -0.83
LINC01116-202ENST00000339037 CEBPGP53567 150 aa9.86□□□□□ -0.83
LINC01116-202ENST00000339037 COX6A2Q02221 97 aa9.86□□□□□ -0.83
LINC01116-202ENST00000339037 CFAP161Q6P656 301 aa9.86□□□□□ -0.83
LINC01116-202ENST00000339037 C15orf56Q8N910 161 aa9.86□□□□□ -0.83
LINC01116-202ENST00000339037 GAGE12HA6NDE8 117 aa9.85□□□□□ -0.83
LINC01116-202ENST00000339037 RPS10P46783 165 aaKnown RBP9.85□□□□□ -0.83
LINC01116-202ENST00000339037 FAM231DQ6ZW35 169 aa9.85□□□□□ -0.83
LINC01116-202ENST00000339037 IGKV2-24A0A0C4DH68 120 aa9.84□□□□□ -0.83
LINC01116-202ENST00000339037 IGKV3OR2-268A0A0C4DH90 116 aa9.84□□□□□ -0.83
LINC01116-202ENST00000339037 LINC00310P59036 64 aa9.84□□□□□ -0.83
LINC01116-202ENST00000339037 MAJINQ3KP22 176 aa9.84□□□□□ -0.83
LINC01116-202ENST00000339037 NDUFS6O75380 124 aaKnown RBP9.83□□□□□ -0.84
LINC01116-202ENST00000339037 HIGD2BQ4VC39 106 aa9.83□□□□□ -0.84
LINC01116-202ENST00000339037 XP32Q5T750 250 aa9.83□□□□□ -0.84
LINC01116-202ENST00000339037 SMIM15Q7Z3B0 74 aa9.83□□□□□ -0.84
LINC01116-202ENST00000339037 PRSS3P2Q8NHM4 247 aa9.83□□□□□ -0.84
LINC01116-202ENST00000339037 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.82□□□□□ -0.84
LINC01116-202ENST00000339037 IGKV2-29A2NJV5 120 aaPredicted RBP9.82□□□□□ -0.84
LINC01116-202ENST00000339037 SDHAF1A6NFY7 115 aa9.82□□□□□ -0.84
LINC01116-202ENST00000339037 A8MWL6 223 aa9.82□□□□□ -0.84
LINC01116-202ENST00000339037 GAS8-AS1O95177 125 aa9.82□□□□□ -0.84
LINC01116-202ENST00000339037 PRR3P79522 188 aaKnown RBP9.82□□□□□ -0.84
LINC01116-202ENST00000339037 LINC01600Q96MT4 127 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms