RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 BLOC1S1P78537 153 aa6.93□□□□□ -1.3
CAPN3-202ENST00000337571 CLPSL2Q6UWE3 100 aa6.93□□□□□ -1.3
CAPN3-202ENST00000337571 C11orf52Q96A22 123 aa6.93□□□□□ -1.3
CAPN3-202ENST00000337571 BIN3Q9NQY0 253 aa6.93□□□□□ -1.3
CAPN3-202ENST00000337571 TRAV1-1A0A0B4J248 108 aa6.92□□□□□ -1.3
CAPN3-202ENST00000337571 RAB19A4D1S5 217 aa6.92□□□□□ -1.3
CAPN3-202ENST00000337571 M0QY20 66 aa6.92□□□□□ -1.3
CAPN3-202ENST00000337571 TRGC1P0CF51 173 aa6.92□□□□□ -1.3
CAPN3-202ENST00000337571 IQCJQ1A5X6 159 aa6.92□□□□□ -1.3
CAPN3-202ENST00000337571 CLRN3Q8NCR9 226 aa6.92□□□□□ -1.3
CAPN3-202ENST00000337571 SMIM12Q96EX1 92 aa6.92□□□□□ -1.3
CAPN3-202ENST00000337571 DPH3Q96FX2 82 aa6.92□□□□□ -1.3
CAPN3-202ENST00000337571 PRR34Q9NV39 138 aa6.92□□□□□ -1.3
CAPN3-202ENST00000337571 TRAV8-4A0A0B4J246 113 aa6.91□□□□□ -1.3
CAPN3-202ENST00000337571 UBE2L6O14933 153 aa6.91□□□□□ -1.3
CAPN3-202ENST00000337571 PRSS1P07477 247 aa6.91□□□□□ -1.3
CAPN3-202ENST00000337571 IGLC6P0CF74 106 aa6.91□□□□□ -1.3
CAPN3-202ENST00000337571 MEF2BQ02080 365 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-202ENST00000337571 REG3AQ06141 175 aa6.91□□□□□ -1.3
CAPN3-202ENST00000337571 SUMO4Q6EEV6 95 aa6.91□□□□□ -1.3
CAPN3-202ENST00000337571 RASL11AQ6T310 242 aa6.91□□□□□ -1.3
CAPN3-202ENST00000337571 TMEM243Q9BU79 118 aa6.91□□□□□ -1.3
CAPN3-202ENST00000337571 NIT2Q9NQR4 276 aa6.91□□□□□ -1.3
CAPN3-202ENST00000337571 IGLV10-54A0A075B6I4 117 aa6.9□□□□□ -1.3
CAPN3-202ENST00000337571 C19orf71A6NCJ1 209 aa6.9□□□□□ -1.3
CAPN3-202ENST00000337571 NTF3P20783 257 aa6.9□□□□□ -1.3
CAPN3-202ENST00000337571 RPL37AP61513 92 aaKnown RBP6.9□□□□□ -1.3
CAPN3-202ENST00000337571 SERTAD4-AS1Q5TG53 156 aa6.9□□□□□ -1.3
CAPN3-202ENST00000337571 LYZL1Q6UWQ5 148 aa6.9□□□□□ -1.3
CAPN3-202ENST00000337571 C9orf163Q8N9P6 203 aa6.9□□□□□ -1.3
CAPN3-202ENST00000337571 DPH3P1Q9H4G8 78 aa6.9□□□□□ -1.3
CAPN3-202ENST00000337571 AP5S1Q9NUS5 200 aa6.9□□□□□ -1.3
CAPN3-202ENST00000337571 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-202ENST00000337571 A0A1B0GUV1 79 aa6.89□□□□□ -1.31
CAPN3-202ENST00000337571 hDV102S1A0JD36 115 aa6.89□□□□□ -1.31
CAPN3-202ENST00000337571 OXTP01178 125 aa6.89□□□□□ -1.31
CAPN3-202ENST00000337571 ADCYAP1P18509 176 aa6.89□□□□□ -1.31
CAPN3-202ENST00000337571 TWIST1Q15672 202 aa6.89□□□□□ -1.31
CAPN3-202ENST00000337571 WDR73Q6P4I2 378 aa6.89□□□□□ -1.31
CAPN3-202ENST00000337571 FAM210AQ96ND0 272 aa6.89□□□□□ -1.31
CAPN3-202ENST00000337571 S100A1P23297 94 aa6.88□□□□□ -1.31
CAPN3-202ENST00000337571 TAGLN2P37802 199 aaKnown RBP6.88□□□□□ -1.31
CAPN3-202ENST00000337571 COTL1Q14019 142 aa6.88□□□□□ -1.31
CAPN3-202ENST00000337571 C10orf91Q5T1B1 145 aa6.88□□□□□ -1.31
CAPN3-202ENST00000337571 LCE3BQ5TA77 95 aa6.88□□□□□ -1.31
CAPN3-202ENST00000337571 SMIM15Q7Z3B0 74 aa6.88□□□□□ -1.31
CAPN3-202ENST00000337571 PGLYRP4Q96LB8 373 aa6.88□□□□□ -1.31
CAPN3-202ENST00000337571 TMEM218A2RU14 115 aa6.87□□□□□ -1.31
CAPN3-202ENST00000337571 SRP19P09132 144 aaKnown RBP6.87□□□□□ -1.31
CAPN3-202ENST00000337571 BCL2P10415 239 aa6.87□□□□□ -1.31
CAPN3-202ENST00000337571 AMTP48728 403 aa6.87□□□□□ -1.31
CAPN3-202ENST00000337571 KRTAP26-1Q6PEX3 210 aa6.87□□□□□ -1.31
CAPN3-202ENST00000337571 UQCC3Q6UW78 93 aa6.87□□□□□ -1.31
CAPN3-202ENST00000337571 C20orf203Q8NBC4 194 aa6.87□□□□□ -1.31
CAPN3-202ENST00000337571 NUDT10Q8NFP7 164 aa6.87□□□□□ -1.31
CAPN3-202ENST00000337571 NUDT11Q96G61 164 aa6.87□□□□□ -1.31
CAPN3-202ENST00000337571 IGLV4-60A0A075B6I1 120 aa6.86□□□□□ -1.31
CAPN3-202ENST00000337571 IGHV3-64A0A075B6Q5 118 aa6.86□□□□□ -1.31
CAPN3-202ENST00000337571 KRTAP10-4P60372 401 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-202ENST00000337571 CFAP161Q6P656 301 aa6.86□□□□□ -1.31
CAPN3-202ENST00000337571 SDIM1Q6ZPB5 146 aa6.86□□□□□ -1.31
CAPN3-202ENST00000337571 RPP21Q9H633 154 aaKnown RBP6.86□□□□□ -1.31
CAPN3-202ENST00000337571 TRBV20OR9-2A0A075B6H5 130 aa6.85□□□□□ -1.31
CAPN3-202ENST00000337571 CNBPP62633 177 aaKnown RBP6.85□□□□□ -1.31
CAPN3-202ENST00000337571 AMMECR1LQ6DCA0 310 aa6.85□□□□□ -1.31
CAPN3-202ENST00000337571 IGKV3OR2-268A0A0C4DH90 116 aa6.84□□□□□ -1.31
CAPN3-202ENST00000337571 CTRLP40313 264 aa6.84□□□□□ -1.31
CAPN3-202ENST00000337571 OCC1Q8TAD7 63 aa6.84□□□□□ -1.31
CAPN3-202ENST00000337571 RNASE7Q9H1E1 156 aaKnown RBP6.84□□□□□ -1.31
CAPN3-202ENST00000337571 GAGE12HA6NDE8 117 aa6.83□□□□□ -1.32
CAPN3-202ENST00000337571 RNASEKQ6P5S7 137 aaKnown RBP6.83□□□□□ -1.32
CAPN3-202ENST00000337571 GATD1Q8NB37 220 aa6.83□□□□□ -1.32
CAPN3-202ENST00000337571 BORCS7Q96B45 105 aa6.83□□□□□ -1.32
CAPN3-202ENST00000337571 RNF185Q96GF1 192 aa6.83□□□□□ -1.32
CAPN3-202ENST00000337571 CARHSP1Q9Y2V2 147 aaKnown RBP6.83□□□□□ -1.32
CAPN3-202ENST00000337571 TRAV26-2A0A0B4J265 109 aa6.82□□□□□ -1.32
CAPN3-202ENST00000337571 H7C423 109 aa6.82□□□□□ -1.32
CAPN3-202ENST00000337571 SCO1O75880 301 aa6.82□□□□□ -1.32
CAPN3-202ENST00000337571 NCR2O95944 276 aa6.82□□□□□ -1.32
CAPN3-202ENST00000337571 APCSP02743 223 aa6.82□□□□□ -1.32
CAPN3-202ENST00000337571 PMCHP20382 165 aa6.82□□□□□ -1.32
CAPN3-202ENST00000337571 PEA15Q15121 130 aa6.82□□□□□ -1.32
CAPN3-202ENST00000337571 CNFNQ9BYD5 112 aa6.82□□□□□ -1.32
CAPN3-202ENST00000337571 GFRA4Q9GZZ7 299 aa6.82□□□□□ -1.32
CAPN3-202ENST00000337571 A8MWL6 223 aa6.81□□□□□ -1.32
CAPN3-202ENST00000337571 PANO1I0J062 215 aa6.81□□□□□ -1.32
CAPN3-202ENST00000337571 GATCO43716 136 aaKnown RBP6.81□□□□□ -1.32
CAPN3-202ENST00000337571 RPS10P46783 165 aaKnown RBP6.81□□□□□ -1.32
CAPN3-202ENST00000337571 TMEM101Q96IK0 257 aa6.81□□□□□ -1.32
CAPN3-202ENST00000337571 BTF3L4Q96K17 158 aa6.81□□□□□ -1.32
CAPN3-202ENST00000337571 SEC11CQ9BY50 192 aa6.81□□□□□ -1.32
CAPN3-202ENST00000337571 EIF5A2Q9GZV4 153 aaKnown RBP6.81□□□□□ -1.32
CAPN3-202ENST00000337571 SMDT1Q9H4I9 107 aa6.81□□□□□ -1.32
CAPN3-202ENST00000337571 PLA2G2DQ9UNK4 145 aa6.81□□□□□ -1.32
CAPN3-202ENST00000337571 A0A087WYN8 130 aa6.8□□□□□ -1.32
CAPN3-202ENST00000337571 TMEM250H0YL14 139 aa6.8□□□□□ -1.32
CAPN3-202ENST00000337571 I3L3M4 83 aa6.8□□□□□ -1.32
CAPN3-202ENST00000337571 K7EN84 100 aa6.8□□□□□ -1.32
CAPN3-202ENST00000337571 NDUFS6O75380 124 aaKnown RBP6.8□□□□□ -1.32
CAPN3-202ENST00000337571 CEBPGP53567 150 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms