RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 LINC00574Q9H8X3 128 aa10.03□□□□□ -0.8
COL2A1-201ENST00000337299 FSTL3O95633 263 aa10.03□□□□□ -0.8
COL2A1-201ENST00000337299 UBE2D3P61077 147 aa10.03□□□□□ -0.8
COL2A1-201ENST00000337299 UBE2D2P62837 147 aa10.03□□□□□ -0.8
COL2A1-201ENST00000337299 SPANXDQ9BXN6 97 aa10.03□□□□□ -0.8
COL2A1-201ENST00000337299 TRAV23DV6A0A075B6W5 121 aa10.03□□□□□ -0.8
COL2A1-201ENST00000337299 NDUFA4O00483 81 aa10.03□□□□□ -0.8
COL2A1-201ENST00000337299 UNQ9165/PRO28630Q6UXU0 137 aa10.03□□□□□ -0.8
COL2A1-201ENST00000337299 STHQ8IWL8 128 aa10.03□□□□□ -0.8
COL2A1-201ENST00000337299 MRPL53Q96EL3 112 aaKnown RBP10.03□□□□□ -0.8
COL2A1-201ENST00000337299 PKIGQ9Y2B9 76 aa10.03□□□□□ -0.8
COL2A1-201ENST00000337299 CELSR3Q9NYQ7 3312 aa10.03□□□□□ -0.8
COL2A1-201ENST00000337299 NSUN5P1Q3KNT7 163 aa10.02□□□□□ -0.8
COL2A1-201ENST00000337299 USMG5Q96IX5 58 aa10.02□□□□□ -0.8
COL2A1-201ENST00000337299 PRO0461Q9UI25 63 aa10.02□□□□□ -0.8
COL2A1-201ENST00000337299 ATP5G1P05496 136 aa10.02□□□□□ -0.81
COL2A1-201ENST00000337299 MALP21145 153 aa10.02□□□□□ -0.81
COL2A1-201ENST00000337299 MGAQ8IWI9 3026 aa10.02□□□□□ -0.81
COL2A1-201ENST00000337299 TRAV13-2A0A0B4J235 113 aa10.02□□□□□ -0.81
COL2A1-201ENST00000337299 LECT2O14960 151 aa10.02□□□□□ -0.81
COL2A1-201ENST00000337299 ADAMTS20P59510 1910 aa10.02□□□□□ -0.81
COL2A1-201ENST00000337299 C20orf197Q8N268 126 aa10.02□□□□□ -0.81
COL2A1-201ENST00000337299 EXPH5Q8NEV8 1989 aa10.01□□□□□ -0.81
COL2A1-201ENST00000337299 IGHV1-58A0A0C4DH39 117 aa10.01□□□□□ -0.81
COL2A1-201ENST00000337299 Q8N9W7 124 aa10.01□□□□□ -0.81
COL2A1-201ENST00000337299 Q8NA96 180 aa10.01□□□□□ -0.81
COL2A1-201ENST00000337299 IGHV7-4-1A0A0J9YVY3 117 aa10.01□□□□□ -0.81
COL2A1-201ENST00000337299 HOXB4P17483 251 aaPredicted RBP10.01□□□□□ -0.81
COL2A1-201ENST00000337299 NPBQ8NG41 125 aa10.01□□□□□ -0.81
COL2A1-201ENST00000337299 CENPVL3A0A0U1RRI6 287 aa10.01□□□□□ -0.81
COL2A1-201ENST00000337299 H7C423 109 aa10.01□□□□□ -0.81
COL2A1-201ENST00000337299 TRBV12-3P01733 135 aa10.01□□□□□ -0.81
COL2A1-201ENST00000337299 TSPEAR-AS2P59090 65 aa10.01□□□□□ -0.81
COL2A1-201ENST00000337299 MIAQ16674 131 aa10.01□□□□□ -0.81
COL2A1-201ENST00000337299 PRR9Q5T870 116 aa10□□□□□ -0.81
COL2A1-201ENST00000337299 RNF152Q8N8N0 203 aa10□□□□□ -0.81
COL2A1-201ENST00000337299 SND1-IT1Q9HBX3 110 aa10□□□□□ -0.81
COL2A1-201ENST00000337299 SRSF2Q01130 221 aaKnown RBP10□□□□□ -0.81
COL2A1-201ENST00000337299 TRBV30A0A0K0K1B3 111 aa9.99□□□□□ -0.81
COL2A1-201ENST00000337299 C10orf105Q8TEF2 133 aa9.99□□□□□ -0.81
COL2A1-201ENST00000337299 VPREB3Q9UKI3 123 aa9.99□□□□□ -0.81
COL2A1-201ENST00000337299 PRRC2AP48634 2157 aaKnown RBP9.99□□□□□ -0.81
COL2A1-201ENST00000337299 TMEM223A0PJW6 202 aa9.99□□□□□ -0.81
COL2A1-201ENST00000337299 DSCR8Q96T75 97 aa9.99□□□□□ -0.81
COL2A1-201ENST00000337299 GHRHP01286 108 aa9.99□□□□□ -0.81
COL2A1-201ENST00000337299 HRCT1Q6UXD1 115 aa9.99□□□□□ -0.81
COL2A1-201ENST00000337299 TMEM263Q8WUH6 116 aaKnown RBP9.98□□□□□ -0.81
COL2A1-201ENST00000337299 FREM2Q5SZK8 3169 aa9.98□□□□□ -0.81
COL2A1-201ENST00000337299 C5orf38Q86SI9 138 aa9.98□□□□□ -0.81
COL2A1-201ENST00000337299 C20orf173Q96LM9 149 aa9.98□□□□□ -0.81
COL2A1-201ENST00000337299 CDKN2A-AS1Q9UH64 79 aa9.98□□□□□ -0.81
COL2A1-201ENST00000337299 ZNF580Q9UK33 172 aa9.98□□□□□ -0.81
COL2A1-201ENST00000337299 LINC01619G3V211 115 aa9.97□□□□□ -0.81
COL2A1-201ENST00000337299 PRB2P02812 416 aaPredicted RBP9.97□□□□□ -0.81
COL2A1-201ENST00000337299 HTN3P15516 51 aa9.97□□□□□ -0.81
COL2A1-201ENST00000337299 SPEGQ15772 3267 aa9.97□□□□□ -0.81
COL2A1-201ENST00000337299 A0A0U1RQV1 116 aa9.97□□□□□ -0.81
COL2A1-201ENST00000337299 SMIM9A6NGZ8 99 aa9.97□□□□□ -0.81
COL2A1-201ENST00000337299 IGF2-ASQ6U949 168 aa9.97□□□□□ -0.81
COL2A1-201ENST00000337299 MAP1AP78559 2803 aaPredicted RBP9.97□□□□□ -0.81
COL2A1-201ENST00000337299 BRK1Q8WUW1 75 aa9.97□□□□□ -0.81
COL2A1-201ENST00000337299 CCDC140Q96MF4 163 aa9.97□□□□□ -0.81
COL2A1-201ENST00000337299 CLPSL2Q6UWE3 100 aa9.96□□□□□ -0.81
COL2A1-201ENST00000337299 IGLV4-3A0A075B6K6 122 aa9.96□□□□□ -0.81
COL2A1-201ENST00000337299 COX7A2LO14548 114 aa9.96□□□□□ -0.81
COL2A1-201ENST00000337299 FAM19A5Q7Z5A7 132 aaPredicted RBP9.96□□□□□ -0.81
COL2A1-201ENST00000337299 TMEM61Q8N0U2 210 aa9.96□□□□□ -0.81
COL2A1-201ENST00000337299 VSIG2Q96IQ7 327 aa9.96□□□□□ -0.82
COL2A1-201ENST00000337299 ZFAND2AQ8N6M9 145 aa9.96□□□□□ -0.82
COL2A1-201ENST00000337299 ORMDL1Q9P0S3 153 aa9.96□□□□□ -0.82
COL2A1-201ENST00000337299 EYSQ5T1H1 3165 aa9.96□□□□□ -0.82
COL2A1-201ENST00000337299 NRGNQ92686 78 aa9.95□□□□□ -0.82
COL2A1-201ENST00000337299 COL6A3P12111 3177 aa9.95□□□□□ -0.82
COL2A1-201ENST00000337299 IGHV1-69P01742 117 aa9.95□□□□□ -0.82
COL2A1-201ENST00000337299 PIK3CD-AS1Q5SR53 167 aa9.95□□□□□ -0.82
COL2A1-201ENST00000337299 CNFNQ9BYD5 112 aa9.95□□□□□ -0.82
COL2A1-201ENST00000337299 INSP01308 110 aa9.95□□□□□ -0.82
COL2A1-201ENST00000337299 SLPIP03973 132 aa9.95□□□□□ -0.82
COL2A1-201ENST00000337299 BLCAPP62952 87 aa9.95□□□□□ -0.82
COL2A1-201ENST00000337299 Q6Q795 121 aa9.95□□□□□ -0.82
COL2A1-201ENST00000337299 RNF223E7ERA6 249 aa9.94□□□□□ -0.82
COL2A1-201ENST00000337299 F5H768 121 aa9.94□□□□□ -0.82
COL2A1-201ENST00000337299 LST1O00453 97 aa9.94□□□□□ -0.82
COL2A1-201ENST00000337299 PSMB8P28062 276 aa9.94□□□□□ -0.82
COL2A1-201ENST00000337299 MIR7-3HGQ8N6C7 128 aa9.94□□□□□ -0.82
COL2A1-201ENST00000337299 COL5A1P20908 1838 aaPredicted RBP9.94□□□□□ -0.82
COL2A1-201ENST00000337299 COX7CP15954 63 aa9.94□□□□□ -0.82
COL2A1-201ENST00000337299 SPANXCQ9NY87 97 aa9.94□□□□□ -0.82
COL2A1-201ENST00000337299 RPL35AP18077 110 aaKnown RBP9.93□□□□□ -0.82
COL2A1-201ENST00000337299 IGLV2-18A0A075B6J9 118 aa9.93□□□□□ -0.82
COL2A1-201ENST00000337299 DEFB130BP0DP73 79 aa9.93□□□□□ -0.82
COL2A1-201ENST00000337299 DEFB130AP0DP74 79 aa9.93□□□□□ -0.82
COL2A1-201ENST00000337299 DAD1P61803 113 aa9.93□□□□□ -0.82
COL2A1-201ENST00000337299 FHL3Q13643 280 aa9.93□□□□□ -0.82
COL2A1-201ENST00000337299 B4DSR2 109 aa9.93□□□□□ -0.82
COL2A1-201ENST00000337299 ADORA2A-AS1P86434 159 aa9.93□□□□□ -0.82
COL2A1-201ENST00000337299 U3KQE9 123 aa9.93□□□□□ -0.82
COL2A1-201ENST00000337299 A0A087WVE0 104 aa9.92□□□□□ -0.82
COL2A1-201ENST00000337299 PROK1P58294 105 aa9.92□□□□□ -0.82
COL2A1-201ENST00000337299 ZFAND3Q9H8U3 227 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms