RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 CCDC179H3BU77 68 aa9.87□□□□□ -0.83
HLCS-201ENST00000336648 CCDC140Q96MF4 163 aa9.87□□□□□ -0.83
HLCS-201ENST00000336648 NLRC5Q86WI3 1866 aa9.87□□□□□ -0.83
HLCS-201ENST00000336648 E7EUB6 86 aa9.87□□□□□ -0.83
HLCS-201ENST00000336648 CACNA1GO43497 2377 aa9.87□□□□□ -0.83
HLCS-201ENST00000336648 K7EQG2 157 aa9.86□□□□□ -0.83
HLCS-201ENST00000336648 HRCT1Q6UXD1 115 aa9.86□□□□□ -0.83
HLCS-201ENST00000336648 CACNA1HO95180 2353 aa9.86□□□□□ -0.83
HLCS-201ENST00000336648 LINC00694P0DN24 101 aa9.86□□□□□ -0.83
HLCS-201ENST00000336648 FAM19A1Q7Z5A9 133 aa9.86□□□□□ -0.83
HLCS-201ENST00000336648 TMEM223A0PJW6 202 aa9.86□□□□□ -0.83
HLCS-201ENST00000336648 CHCHD10Q8WYQ3 142 aaPredicted RBP9.86□□□□□ -0.83
HLCS-201ENST00000336648 TRBV30A0A0K0K1B3 111 aa9.86□□□□□ -0.83
HLCS-201ENST00000336648 DNAJC9-AS1A6NH13 148 aa9.86□□□□□ -0.83
HLCS-201ENST00000336648 FAM222AQ5U5X8 452 aa9.86□□□□□ -0.83
HLCS-201ENST00000336648 IGLV2-8P01709 118 aa9.85□□□□□ -0.83
HLCS-201ENST00000336648 NCKAP5O14513 1909 aa9.85□□□□□ -0.83
HLCS-201ENST00000336648 SLPIP03973 132 aa9.85□□□□□ -0.83
HLCS-201ENST00000336648 C9orf85Q96MD7 179 aa9.85□□□□□ -0.83
HLCS-201ENST00000336648 MYLKQ15746 1914 aa9.85□□□□□ -0.83
HLCS-201ENST00000336648 NOTCH3Q9UM47 2321 aa9.85□□□□□ -0.83
HLCS-201ENST00000336648 LINC00269Q8N2A0 174 aa9.85□□□□□ -0.83
HLCS-201ENST00000336648 TANC1Q9C0D5 1861 aa9.85□□□□□ -0.83
HLCS-201ENST00000336648 TNRC6BQ9UPQ9 1833 aaKnown RBP9.84□□□□□ -0.83
HLCS-201ENST00000336648 HILS1P60008 231 aa9.84□□□□□ -0.83
HLCS-201ENST00000336648 MGAMO43451 1857 aa9.84□□□□□ -0.83
HLCS-201ENST00000336648 MRPS12O15235 138 aaKnown RBP9.84□□□□□ -0.83
HLCS-201ENST00000336648 ZNF80P51504 273 aaPredicted RBP9.84□□□□□ -0.83
HLCS-201ENST00000336648 HELZP42694 1942 aaKnown RBP9.84□□□□□ -0.83
HLCS-201ENST00000336648 TRBV6-4A0A1B0GX49 114 aa9.84□□□□□ -0.83
HLCS-201ENST00000336648 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.84□□□□□ -0.83
HLCS-201ENST00000336648 CCKP06307 115 aa9.83□□□□□ -0.84
HLCS-201ENST00000336648 NUP210Q8TEM1 1887 aaPredicted RBP9.83□□□□□ -0.84
HLCS-201ENST00000336648 PRR4Q16378 134 aa9.83□□□□□ -0.84
HLCS-201ENST00000336648 Q6ZTI0 123 aa9.83□□□□□ -0.84
HLCS-201ENST00000336648 PYGO1Q9Y3Y4 419 aa9.83□□□□□ -0.84
HLCS-201ENST00000336648 ZNF22P17026 224 aaPredicted RBP9.83□□□□□ -0.84
HLCS-201ENST00000336648 Q6YL49 198 aa9.83□□□□□ -0.84
HLCS-201ENST00000336648 ZFAND3Q9H8U3 227 aa9.83□□□□□ -0.84
HLCS-201ENST00000336648 DEFB4AO15263 64 aa9.83□□□□□ -0.84
HLCS-201ENST00000336648 TRIAP1O43715 76 aa9.83□□□□□ -0.84
HLCS-201ENST00000336648 MIFP14174 115 aa9.83□□□□□ -0.84
HLCS-201ENST00000336648 LMO4P61968 165 aa9.83□□□□□ -0.84
HLCS-201ENST00000336648 LINC00308Q8TCZ7 52 aa9.83□□□□□ -0.84
HLCS-201ENST00000336648 EBI3Q14213 229 aa9.82□□□□□ -0.84
HLCS-201ENST00000336648 MUC7Q8TAX7 377 aa9.82□□□□□ -0.84
HLCS-201ENST00000336648 MBD6Q96DN6 1003 aa9.82□□□□□ -0.84
HLCS-201ENST00000336648 WFDC10AQ9H1F0 79 aa9.82□□□□□ -0.84
HLCS-201ENST00000336648 IGLV4-3A0A075B6K6 122 aa9.82□□□□□ -0.84
HLCS-201ENST00000336648 DEFB114Q30KQ6 69 aa9.82□□□□□ -0.84
HLCS-201ENST00000336648 GPR179Q6PRD1 2367 aa9.82□□□□□ -0.84
HLCS-201ENST00000336648 CRYGDP07320 174 aa9.82□□□□□ -0.84
HLCS-201ENST00000336648 CEMP1Q6PRD7 247 aaPredicted RBP9.82□□□□□ -0.84
HLCS-201ENST00000336648 A0A096LNI7 61 aa9.81□□□□□ -0.84
HLCS-201ENST00000336648 WFDC13Q8IUB5 93 aa9.81□□□□□ -0.84
HLCS-201ENST00000336648 LINC00467Q9BRT7 94 aa9.81□□□□□ -0.84
HLCS-201ENST00000336648 U3KQK5 164 aa9.81□□□□□ -0.84
HLCS-201ENST00000336648 GTF3C1Q12789 2109 aa9.81□□□□□ -0.84
HLCS-201ENST00000336648 IGKV2-24A0A0C4DH68 120 aa9.81□□□□□ -0.84
HLCS-201ENST00000336648 TRBV6-5A0A0K0K1A5 114 aa9.81□□□□□ -0.84
HLCS-201ENST00000336648 DEFB1P60022 68 aa9.81□□□□□ -0.84
HLCS-201ENST00000336648 CDKN2A-AS1Q9UH64 79 aa9.81□□□□□ -0.84
HLCS-201ENST00000336648 CHD3Q12873 2000 aaKnown RBP9.81□□□□□ -0.84
HLCS-201ENST00000336648 RBX1P62877 108 aa9.8□□□□□ -0.84
HLCS-201ENST00000336648 C1orf158Q8N1D5 194 aa9.8□□□□□ -0.84
HLCS-201ENST00000336648 ZNF706Q9Y5V0 76 aaPredicted RBP9.8□□□□□ -0.84
HLCS-201ENST00000336648 FRMD6-AS1P0C7T7 363 aa9.8□□□□□ -0.84
HLCS-201ENST00000336648 C3orf84H3BNL1 204 aa9.8□□□□□ -0.84
HLCS-201ENST00000336648 TRBV6-8A0A0A6YYG3 113 aa9.8□□□□□ -0.84
HLCS-201ENST00000336648 TP73-AS1Q9UF72 201 aa9.8□□□□□ -0.84
HLCS-201ENST00000336648 FAM30AQ9NZY2 134 aa9.79□□□□□ -0.84
HLCS-201ENST00000336648 DHRS4-AS1Q9P1J3 65 aa9.79□□□□□ -0.84
HLCS-201ENST00000336648 MSMPQ1L6U9 139 aa9.79□□□□□ -0.84
HLCS-201ENST00000336648 Q6JHZ5 121 aa9.79□□□□□ -0.84
HLCS-201ENST00000336648 LINC00322Q6ZN03 302 aaPredicted RBP9.78□□□□□ -0.84
HLCS-201ENST00000336648 M0QY20 66 aa9.78□□□□□ -0.84
HLCS-201ENST00000336648 VPREB1P12018 145 aa9.78□□□□□ -0.84
HLCS-201ENST00000336648 TP53TG3Q9ULZ0 132 aa9.78□□□□□ -0.84
HLCS-201ENST00000336648 DEFB131BA0A096LNP1 70 aa9.78□□□□□ -0.84
HLCS-201ENST00000336648 UBE2D2P62837 147 aa9.78□□□□□ -0.84
HLCS-201ENST00000336648 CFAP126Q5VTH2 177 aa9.78□□□□□ -0.84
HLCS-201ENST00000336648 PLXND1Q9Y4D7 1925 aa9.78□□□□□ -0.84
HLCS-201ENST00000336648 SYCNQ0VAF6 134 aa9.77□□□□□ -0.84
HLCS-201ENST00000336648 GDF5OSQ5U4N7 250 aa9.77□□□□□ -0.85
HLCS-201ENST00000336648 A0A087WZ39 114 aa9.77□□□□□ -0.85
HLCS-201ENST00000336648 ANAPC1Q9H1A4 1944 aa9.77□□□□□ -0.85
HLCS-201ENST00000336648 Q6Q795 121 aa9.77□□□□□ -0.85
HLCS-201ENST00000336648 NRGNQ92686 78 aa9.77□□□□□ -0.85
HLCS-201ENST00000336648 LINC01548A6NM66 108 aa9.76□□□□□ -0.85
HLCS-201ENST00000336648 EIF4EBP1Q13541 118 aaPredicted RBP9.76□□□□□ -0.85
HLCS-201ENST00000336648 C7orf33Q8WU49 177 aa9.76□□□□□ -0.85
HLCS-201ENST00000336648 FRMPD3Q5JV73 1810 aa9.76□□□□□ -0.85
HLCS-201ENST00000336648 MED13Q9UHV7 2174 aa9.76□□□□□ -0.85
HLCS-201ENST00000336648 IGHV4-30-4P0DP06 118 aa9.76□□□□□ -0.85
HLCS-201ENST00000336648 IGHV4-31P0DP07 118 aa9.76□□□□□ -0.85
HLCS-201ENST00000336648 TRAV7A0A075B6U4 112 aa9.75□□□□□ -0.85
HLCS-201ENST00000336648 SHISA2Q6UWI4 295 aa9.75□□□□□ -0.85
HLCS-201ENST00000336648 Q8NA96 180 aa9.75□□□□□ -0.85
HLCS-201ENST00000336648 M0R378 163 aa9.75□□□□□ -0.85
HLCS-201ENST00000336648 SOSTDC1Q6X4U4 206 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms