RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 GAGE5Q13069 117 aa13.06□□□□□ -0.32
IFFO1-201ENST00000336604 GAGE6Q13070 117 aa13.06□□□□□ -0.32
IFFO1-201ENST00000336604 NAV2Q8IVL1 2488 aa13.06□□□□□ -0.32
IFFO1-201ENST00000336604 ZNF469Q96JG9 3925 aaPredicted RBP13.06□□□□□ -0.32
IFFO1-201ENST00000336604 DEFB131AP59861 70 aa13.06□□□□□ -0.32
IFFO1-201ENST00000336604 IGLV4-3A0A075B6K6 122 aa13.05□□□□□ -0.32
IFFO1-201ENST00000336604 A0A0J9YXV3 536 aa13.05□□□□□ -0.32
IFFO1-201ENST00000336604 J3QLI3 93 aa13.05□□□□□ -0.32
IFFO1-201ENST00000336604 VCX2Q9H322 139 aa13.05□□□□□ -0.32
IFFO1-201ENST00000336604 TMEM223A0PJW6 202 aa13.05□□□□□ -0.32
IFFO1-201ENST00000336604 Q6YL49 198 aa13.05□□□□□ -0.32
IFFO1-201ENST00000336604 SBSPONQ8IVN8 264 aa13.05□□□□□ -0.32
IFFO1-201ENST00000336604 Q9UF83 564 aa13.05□□□□□ -0.32
IFFO1-201ENST00000336604 ZNF22P17026 224 aaPredicted RBP13.04□□□□□ -0.32
IFFO1-201ENST00000336604 DUX3Q96PT4 197 aa13.04□□□□□ -0.32
IFFO1-201ENST00000336604 TLN2Q9Y4G6 2542 aa13.04□□□□□ -0.32
IFFO1-201ENST00000336604 TRAV4A0A0B4J268 109 aa13.04□□□□□ -0.32
IFFO1-201ENST00000336604 TMEM262E9PQX1 116 aa13.04□□□□□ -0.32
IFFO1-201ENST00000336604 CRLF1O75462 422 aa13.04□□□□□ -0.32
IFFO1-201ENST00000336604 NHLRC4P0CG21 123 aaPredicted RBP13.04□□□□□ -0.32
IFFO1-201ENST00000336604 A4D1N5 150 aa13.03□□□□□ -0.32
IFFO1-201ENST00000336604 RHODO00212 210 aa13.03□□□□□ -0.32
IFFO1-201ENST00000336604 HIST2H2BDQ6DRA6 164 aa13.03□□□□□ -0.32
IFFO1-201ENST00000336604 CEMP1Q6PRD7 247 aaPredicted RBP13.03□□□□□ -0.32
IFFO1-201ENST00000336604 CITED1Q99966 193 aa13.03□□□□□ -0.32
IFFO1-201ENST00000336604 RBMY1BA6NDE4 496 aaKnown RBP13.02□□□□□ -0.32
IFFO1-201ENST00000336604 RBMY1EA6NEQ0 496 aaKnown RBP13.02□□□□□ -0.32
IFFO1-201ENST00000336604 SNCGO76070 127 aa13.02□□□□□ -0.32
IFFO1-201ENST00000336604 RBMY1DP0C7P1 496 aaKnown RBP13.02□□□□□ -0.32
IFFO1-201ENST00000336604 GAGE2BQ13066 116 aa13.02□□□□□ -0.32
IFFO1-201ENST00000336604 Q1RN00 199 aa13.02□□□□□ -0.32
IFFO1-201ENST00000336604 GAGE2EQ4V326 116 aa13.02□□□□□ -0.32
IFFO1-201ENST00000336604 RNF152Q8N8N0 203 aa13.02□□□□□ -0.32
IFFO1-201ENST00000336604 GAGE2DQ9UEU5 116 aa13.02□□□□□ -0.32
IFFO1-201ENST00000336604 TRAV2A0A0B4J234 112 aa13.02□□□□□ -0.33
IFFO1-201ENST00000336604 NTN5Q8WTR8 489 aaPredicted RBP13.02□□□□□ -0.33
IFFO1-201ENST00000336604 H3BMM0 161 aa13.01□□□□□ -0.33
IFFO1-201ENST00000336604 LEPROTO15243 131 aa13.01□□□□□ -0.33
IFFO1-201ENST00000336604 PRB1P04280 392 aa13.01□□□□□ -0.33
IFFO1-201ENST00000336604 RNASE13Q5GAN3 156 aaKnown RBP13.01□□□□□ -0.33
IFFO1-201ENST00000336604 FAM104AQ969W3 186 aa13.01□□□□□ -0.33
IFFO1-201ENST00000336604 EIF4EBP3O60516 100 aaPredicted RBP13□□□□□ -0.33
IFFO1-201ENST00000336604 FSHBP01225 129 aa13□□□□□ -0.33
IFFO1-201ENST00000336604 TMEM61Q8N0U2 210 aa13□□□□□ -0.33
IFFO1-201ENST00000336604 SPXQ9BT56 116 aa13□□□□□ -0.33
IFFO1-201ENST00000336604 CHD6Q8TD26 2715 aa13□□□□□ -0.33
IFFO1-201ENST00000336604 EPG5Q9HCE0 2579 aa12.99□□□□□ -0.33
IFFO1-201ENST00000336604 IGHV4-31P0DP07 118 aa12.99□□□□□ -0.33
IFFO1-201ENST00000336604 CD28P10747 220 aa12.99□□□□□ -0.33
IFFO1-201ENST00000336604 Q6ZSN1 163 aa12.99□□□□□ -0.33
IFFO1-201ENST00000336604 ADARB2-AS1A8MUL3 147 aa12.99□□□□□ -0.33
IFFO1-201ENST00000336604 CCDC179H3BU77 68 aa12.99□□□□□ -0.33
IFFO1-201ENST00000336604 NDUFV3P56181 108 aaKnown RBP12.99□□□□□ -0.33
IFFO1-201ENST00000336604 AKAP9Q99996 3911 aa12.98□□□□□ -0.33
IFFO1-201ENST00000336604 TEX49A0A1B0GTD5 131 aa12.98□□□□□ -0.33
IFFO1-201ENST00000336604 NF1P21359 2839 aa12.98□□□□□ -0.33
IFFO1-201ENST00000336604 TTC32Q5I0X7 151 aa12.98□□□□□ -0.33
IFFO1-201ENST00000336604 KHDC1LQ5JSQ8 128 aa12.98□□□□□ -0.33
IFFO1-201ENST00000336604 TNFRSF18Q9Y5U5 241 aa12.98□□□□□ -0.33
IFFO1-201ENST00000336604 IGHV3-33P01772 117 aa12.97□□□□□ -0.33
IFFO1-201ENST00000336604 KRTAP10-9P60411 292 aa12.97□□□□□ -0.33
IFFO1-201ENST00000336604 USP24Q9UPU5 2620 aa12.97□□□□□ -0.33
IFFO1-201ENST00000336604 MUSTN1Q8IVN3 82 aa12.96□□□□□ -0.33
IFFO1-201ENST00000336604 UBR5O95071 2799 aaPredicted RBP12.96□□□□□ -0.33
IFFO1-201ENST00000336604 TRAV8-3A0A0A6YYJ7 113 aa12.96□□□□□ -0.33
IFFO1-201ENST00000336604 M0R2P5 195 aa12.96□□□□□ -0.33
IFFO1-201ENST00000336604 IGHV3-30-3P0DP02 117 aa12.96□□□□□ -0.33
IFFO1-201ENST00000336604 NACAE9PAV3 2078 aa12.96□□□□□ -0.34
IFFO1-201ENST00000336604 TMEM263Q8WUH6 116 aaKnown RBP12.96□□□□□ -0.34
IFFO1-201ENST00000336604 EDA2RQ9HAV5 297 aa12.96□□□□□ -0.34
IFFO1-201ENST00000336604 PYGO1Q9Y3Y4 419 aa12.96□□□□□ -0.34
IFFO1-201ENST00000336604 NIPBLQ6KC79 2804 aaeCLIP12.95□□□□□ -0.34
IFFO1-201ENST00000336604 SONP18583 2426 aaKnown RBP12.95□□□□□ -0.34
IFFO1-201ENST00000336604 A8MTW9 85 aa12.95□□□□□ -0.34
IFFO1-201ENST00000336604 A0A0J9YXY3 114 aa12.94□□□□□ -0.34
IFFO1-201ENST00000336604 GAGE12JA6NER3 117 aa12.94□□□□□ -0.34
IFFO1-201ENST00000336604 GAGE7O76087 117 aa12.94□□□□□ -0.34
IFFO1-201ENST00000336604 GAGE12FP0CL80 117 aa12.94□□□□□ -0.34
IFFO1-201ENST00000336604 GAGE12GP0CL81 117 aa12.94□□□□□ -0.34
IFFO1-201ENST00000336604 GAGE12IP0CL82 117 aa12.94□□□□□ -0.34
IFFO1-201ENST00000336604 IFITM1P13164 125 aa12.94□□□□□ -0.34
IFFO1-201ENST00000336604 MRPS36P82909 103 aaKnown RBP12.94□□□□□ -0.34
IFFO1-201ENST00000336604 GAGE4Q13068 117 aa12.94□□□□□ -0.34
IFFO1-201ENST00000336604 TIMM21Q9BVV7 248 aa12.94□□□□□ -0.34
IFFO1-201ENST00000336604 CR1P17927 2039 aa12.94□□□□□ -0.34
IFFO1-201ENST00000336604 MAP6D1Q9H9H5 199 aa12.94□□□□□ -0.34
IFFO1-201ENST00000336604 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.93□□□□□ -0.34
IFFO1-201ENST00000336604 IGHV3-38A0A0C4DH36 116 aa12.93□□□□□ -0.34
IFFO1-201ENST00000336604 IGKV2-29A2NJV5 120 aaPredicted RBP12.93□□□□□ -0.34
IFFO1-201ENST00000336604 LINC01620Q4KN68 170 aa12.93□□□□□ -0.34
IFFO1-201ENST00000336604 LINC01587Q99440 93 aa12.93□□□□□ -0.34
IFFO1-201ENST00000336604 ZNF415Q09FC8 603 aa12.93□□□□□ -0.34
IFFO1-201ENST00000336604 TRAV8-4A0A0B4J246 113 aa12.92□□□□□ -0.34
IFFO1-201ENST00000336604 CHCHD7Q9BUK0 85 aa12.92□□□□□ -0.34
IFFO1-201ENST00000336604 PEMTQ9UBM1 199 aa12.92□□□□□ -0.34
IFFO1-201ENST00000336604 A8MZ25 164 aa12.92□□□□□ -0.34
IFFO1-201ENST00000336604 ATXN8Q156A1 80 aa12.92□□□□□ -0.34
IFFO1-201ENST00000336604 C15orf53Q8NAA6 179 aa12.92□□□□□ -0.34
IFFO1-201ENST00000336604 C11orf72Q8NBR9 251 aa12.92□□□□□ -0.34
IFFO1-201ENST00000336604 SMIM20Q8N5G0 67 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms