RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 UQCRQO14949 82 aa12.57□□□□□ -0.4
PTCH1-201ENST00000331920 MT-ATP8P03928 68 aa12.57□□□□□ -0.4
PTCH1-201ENST00000331920 TRBV6-1A0A0K0K1D8 114 aa12.57□□□□□ -0.4
PTCH1-201ENST00000331920 CCKP06307 115 aa12.57□□□□□ -0.4
PTCH1-201ENST00000331920 KAAG1Q9UBP8 84 aa12.57□□□□□ -0.4
PTCH1-201ENST00000331920 SPRNQ5BIV9 151 aa12.56□□□□□ -0.4
PTCH1-201ENST00000331920 C1orf195Q5TG92 126 aa12.56□□□□□ -0.4
PTCH1-201ENST00000331920 NDUFA11Q86Y39 141 aa12.56□□□□□ -0.4
PTCH1-201ENST00000331920 NUPR1O60356 82 aa12.56□□□□□ -0.4
PTCH1-201ENST00000331920 C4orf3Q8WVX3 66 aa12.56□□□□□ -0.4
PTCH1-201ENST00000331920 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-201ENST00000331920 IL17DQ8TAD2 202 aa12.56□□□□□ -0.4
PTCH1-201ENST00000331920 TRBV27A0A0K0K1C4 114 aa12.56□□□□□ -0.4
PTCH1-201ENST00000331920 UFSP1Q6NVU6 142 aa12.56□□□□□ -0.4
PTCH1-201ENST00000331920 PTPRQQ9UMZ3 2332 aa12.56□□□□□ -0.4
PTCH1-201ENST00000331920 IGF2-ASQ6U949 168 aa12.55□□□□□ -0.4
PTCH1-201ENST00000331920 PRO0255Q9UI72 69 aa12.55□□□□□ -0.4
PTCH1-201ENST00000331920 ZFAND2AQ8N6M9 145 aa12.55□□□□□ -0.4
PTCH1-201ENST00000331920 TECTAO75443 2155 aa12.55□□□□□ -0.4
PTCH1-201ENST00000331920 NUP210Q8TEM1 1887 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-201ENST00000331920 C5orf56Q8N8D9 126 aa12.55□□□□□ -0.4
PTCH1-201ENST00000331920 CTSZQ9UBR2 303 aa12.53□□□□□ -0.4
PTCH1-201ENST00000331920 PLXNA4Q9HCM2 1894 aa12.53□□□□□ -0.4
PTCH1-201ENST00000331920 CHCHD10Q8WYQ3 142 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-201ENST00000331920 COL4A6Q14031 1691 aa12.53□□□□□ -0.4
PTCH1-201ENST00000331920 FOXL2NBQ6ZUU3 175 aa12.53□□□□□ -0.4
PTCH1-201ENST00000331920 C22orf34Q6ZV56 151 aa12.52□□□□□ -0.41
PTCH1-201ENST00000331920 TP53TG3Q9ULZ0 132 aa12.52□□□□□ -0.41
PTCH1-201ENST00000331920 DEFB131BA0A096LNP1 70 aa12.52□□□□□ -0.41
PTCH1-201ENST00000331920 RPL37AP8A6NKH3 93 aa12.52□□□□□ -0.41
PTCH1-201ENST00000331920 C10orf91Q5T1B1 145 aa12.52□□□□□ -0.41
PTCH1-201ENST00000331920 I3L2K1 104 aa12.51□□□□□ -0.41
PTCH1-201ENST00000331920 PMAIP1Q13794 54 aa12.51□□□□□ -0.41
PTCH1-201ENST00000331920 ODF1Q14990 250 aa12.51□□□□□ -0.41
PTCH1-201ENST00000331920 NANOS2P60321 138 aaKnown RBP12.51□□□□□ -0.41
PTCH1-201ENST00000331920 K7EIM0 57 aa12.51□□□□□ -0.41
PTCH1-201ENST00000331920 TRBV10-1A0A0K0K1A3 114 aa12.51□□□□□ -0.41
PTCH1-201ENST00000331920 FAM222AQ5U5X8 452 aa12.5□□□□□ -0.41
PTCH1-201ENST00000331920 COL4A5P29400 1685 aa12.49□□□□□ -0.41
PTCH1-201ENST00000331920 HILS1P60008 231 aa12.49□□□□□ -0.41
PTCH1-201ENST00000331920 COA6Q5JTJ3 125 aaKnown RBP12.49□□□□□ -0.41
PTCH1-201ENST00000331920 CREBBPQ92793 2442 aa12.49□□□□□ -0.41
PTCH1-201ENST00000331920 HIGD1BQ9P298 99 aa12.49□□□□□ -0.41
PTCH1-201ENST00000331920 TMEM223A0PJW6 202 aa12.49□□□□□ -0.41
PTCH1-201ENST00000331920 PROK2Q9HC23 129 aa12.49□□□□□ -0.41
PTCH1-201ENST00000331920 SPINK1P00995 79 aa12.49□□□□□ -0.41
PTCH1-201ENST00000331920 IGLV11-55A0A075B6I3 123 aa12.48□□□□□ -0.41
PTCH1-201ENST00000331920 A0A0J9YXY3 114 aa12.48□□□□□ -0.41
PTCH1-201ENST00000331920 LINC00467Q9BRT7 94 aa12.48□□□□□ -0.41
PTCH1-201ENST00000331920 FAM19A3Q7Z5A8 133 aa12.48□□□□□ -0.41
PTCH1-201ENST00000331920 LY6G6CO95867 125 aa12.48□□□□□ -0.41
PTCH1-201ENST00000331920 LY6LH3BQJ8 138 aa12.48□□□□□ -0.41
PTCH1-201ENST00000331920 IGLV1-44P01699 117 aa12.48□□□□□ -0.41
PTCH1-201ENST00000331920 WDR90Q96KV7 1748 aa12.47□□□□□ -0.41
PTCH1-201ENST00000331920 SPANXB1Q9NS25 103 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-201ENST00000331920 CIRBP-AS1Q8TBR5 109 aa12.46□□□□□ -0.41
PTCH1-201ENST00000331920 COL4A1P02462 1669 aa12.46□□□□□ -0.41
PTCH1-201ENST00000331920 Q6ZTI0 123 aa12.46□□□□□ -0.42
PTCH1-201ENST00000331920 MAP6D1Q9H9H5 199 aa12.45□□□□□ -0.42
PTCH1-201ENST00000331920 ATP5EP56381 51 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-201ENST00000331920 LINC00526Q96FQ7 95 aa12.45□□□□□ -0.42
PTCH1-201ENST00000331920 FAM215AQ9Y5M1 114 aa12.45□□□□□ -0.42
PTCH1-201ENST00000331920 CEP192Q8TEP8 1941 aa12.45□□□□□ -0.42
PTCH1-201ENST00000331920 UNQ9165/PRO28630Q6UXU0 137 aa12.44□□□□□ -0.42
PTCH1-201ENST00000331920 PCNX3Q9H6A9 2034 aa12.44□□□□□ -0.42
PTCH1-201ENST00000331920 DNAJC9-AS1A6NH13 148 aa12.44□□□□□ -0.42
PTCH1-201ENST00000331920 MYCNOSP40205 109 aa12.44□□□□□ -0.42
PTCH1-201ENST00000331920 NUP210LQ5VU65 1888 aa12.44□□□□□ -0.42
PTCH1-201ENST00000331920 ESRGQ1W209 222 aa12.44□□□□□ -0.42
PTCH1-201ENST00000331920 NDUFC1O43677 76 aa12.43□□□□□ -0.42
PTCH1-201ENST00000331920 IGFL3Q6UXB1 125 aa12.43□□□□□ -0.42
PTCH1-201ENST00000331920 C17orf82Q86X59 251 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-201ENST00000331920 WFDC10AQ9H1F0 79 aa12.43□□□□□ -0.42
PTCH1-201ENST00000331920 A6NDX4 124 aa12.42□□□□□ -0.42
PTCH1-201ENST00000331920 CELA1Q9UNI1 258 aa12.42□□□□□ -0.42
PTCH1-201ENST00000331920 TRBV7-6A0A0J9YX20 115 aa12.42□□□□□ -0.42
PTCH1-201ENST00000331920 SPATA12Q7Z6I5 190 aa12.42□□□□□ -0.42
PTCH1-201ENST00000331920 SOSTDC1Q6X4U4 206 aa12.42□□□□□ -0.42
PTCH1-201ENST00000331920 ZNF706Q9Y5V0 76 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-201ENST00000331920 THSD7AQ9UPZ6 1657 aa12.42□□□□□ -0.42
PTCH1-201ENST00000331920 MIFP14174 115 aa12.41□□□□□ -0.42
PTCH1-201ENST00000331920 C6orf99Q4VX62 202 aa12.41□□□□□ -0.42
PTCH1-201ENST00000331920 Q6Q795 121 aa12.41□□□□□ -0.42
PTCH1-201ENST00000331920 KIAA1549LQ6ZVL6 1849 aa12.4□□□□□ -0.42
PTCH1-201ENST00000331920 C20orf203Q8NBC4 194 aa12.4□□□□□ -0.42
PTCH1-201ENST00000331920 TRBV6-5A0A0K0K1A5 114 aa12.4□□□□□ -0.42
PTCH1-201ENST00000331920 ATP5EP2Q5VTU8 51 aa12.4□□□□□ -0.42
PTCH1-201ENST00000331920 PLAC8L1A1L4L8 177 aa12.39□□□□□ -0.43
PTCH1-201ENST00000331920 CTRLP40313 264 aa12.39□□□□□ -0.43
PTCH1-201ENST00000331920 PATE2Q6UY27 113 aa12.39□□□□□ -0.43
PTCH1-201ENST00000331920 TRIAP1O43715 76 aa12.39□□□□□ -0.43
PTCH1-201ENST00000331920 NDUFA7O95182 113 aa12.38□□□□□ -0.43
PTCH1-201ENST00000331920 PSPHP1O15172 72 aa12.37□□□□□ -0.43
PTCH1-201ENST00000331920 LINC00482Q8N8I6 264 aa12.37□□□□□ -0.43
PTCH1-201ENST00000331920 C20orf173Q96LM9 149 aa12.37□□□□□ -0.43
PTCH1-201ENST00000331920 CDKN2A-AS1Q9UH64 79 aa12.37□□□□□ -0.43
PTCH1-201ENST00000331920 C10orf25Q5T742 122 aa12.37□□□□□ -0.43
PTCH1-201ENST00000331920 INSL3P51460 131 aa12.36□□□□□ -0.43
PTCH1-201ENST00000331920 PTPN13Q12923 2485 aa12.36□□□□□ -0.43
PTCH1-201ENST00000331920 A0A0J9YX75 114 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 228.8 ms