RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 IGHV1OR15-1A0A075B7D0 117 aa9.34□□□□□ -0.91
CCDC60-201ENST00000327554 BEAN1Q3B7T3 259 aa9.34□□□□□ -0.91
CCDC60-201ENST00000327554 FBXL19-AS1Q494R0 122 aa9.34□□□□□ -0.91
CCDC60-201ENST00000327554 C22orf24Q9Y442 160 aa9.34□□□□□ -0.91
CCDC60-201ENST00000327554 DAZ1Q9NQZ3 744 aaKnown RBP9.33□□□□□ -0.92
CCDC60-201ENST00000327554 DAZ2Q13117 558 aaKnown RBP9.33□□□□□ -0.92
CCDC60-201ENST00000327554 DAZ4Q86SG3 579 aaKnown RBP9.33□□□□□ -0.92
CCDC60-201ENST00000327554 USMG5Q96IX5 58 aa9.33□□□□□ -0.92
CCDC60-201ENST00000327554 EDA2RQ9HAV5 297 aa9.33□□□□□ -0.92
CCDC60-201ENST00000327554 DAZ3Q9NR90 486 aaKnown RBP9.33□□□□□ -0.92
CCDC60-201ENST00000327554 SPTBN1Q01082 2364 aaKnown RBP9.33□□□□□ -0.92
CCDC60-201ENST00000327554 NACAE9PAV3 2078 aa9.33□□□□□ -0.92
CCDC60-201ENST00000327554 NDUFA1O15239 70 aa9.32□□□□□ -0.92
CCDC60-201ENST00000327554 IGKV3-20P01619 116 aa9.32□□□□□ -0.92
CCDC60-201ENST00000327554 CXCL5P42830 114 aa9.32□□□□□ -0.92
CCDC60-201ENST00000327554 LRRC75A-AS1Q8N1F1 130 aa9.32□□□□□ -0.92
CCDC60-201ENST00000327554 C2orf48Q96LS8 159 aa9.32□□□□□ -0.92
CCDC60-201ENST00000327554 PEMTQ9UBM1 199 aa9.32□□□□□ -0.92
CCDC60-201ENST00000327554 GVINP1Q7Z2Y8 2422 aa9.32□□□□□ -0.92
CCDC60-201ENST00000327554 COX7CP15954 63 aa9.32□□□□□ -0.92
CCDC60-201ENST00000327554 CDSNQ15517 529 aa9.32□□□□□ -0.92
CCDC60-201ENST00000327554 LINC00308Q8TCZ7 52 aa9.32□□□□□ -0.92
CCDC60-201ENST00000327554 UBE2D4Q9Y2X8 147 aa9.32□□□□□ -0.92
CCDC60-201ENST00000327554 A0A1B0GX51 115 aa9.31□□□□□ -0.92
CCDC60-201ENST00000327554 PROK1P58294 105 aa9.31□□□□□ -0.92
CCDC60-201ENST00000327554 Q8N2B8 174 aa9.31□□□□□ -0.92
CCDC60-201ENST00000327554 CHCHD7Q9BUK0 85 aa9.31□□□□□ -0.92
CCDC60-201ENST00000327554 J3KT08 172 aa9.31□□□□□ -0.92
CCDC60-201ENST00000327554 CDKN2A-AS1Q9UH64 79 aa9.31□□□□□ -0.92
CCDC60-201ENST00000327554 IGHV3-73A0A0B4J1V6 119 aa9.3□□□□□ -0.92
CCDC60-201ENST00000327554 HIST1H4AP62805 103 aaKnown RBP9.3□□□□□ -0.92
CCDC60-201ENST00000327554 Q9UF83 564 aa9.3□□□□□ -0.92
CCDC60-201ENST00000327554 H3BUA1 57 aa9.3□□□□□ -0.92
CCDC60-201ENST00000327554 TRACP01848 142 aa9.3□□□□□ -0.92
CCDC60-201ENST00000327554 PF4V1P10720 104 aa9.3□□□□□ -0.92
CCDC60-201ENST00000327554 TIRAPP58753 221 aa9.3□□□□□ -0.92
CCDC60-201ENST00000327554 SPINK13Q1W4C9 94 aa9.3□□□□□ -0.92
CCDC60-201ENST00000327554 C5orf47Q569G3 176 aa9.3□□□□□ -0.92
CCDC60-201ENST00000327554 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.3□□□□□ -0.92
CCDC60-201ENST00000327554 BAALC-AS2P0C853 105 aa9.29□□□□□ -0.92
CCDC60-201ENST00000327554 CRYGAP11844 174 aa9.29□□□□□ -0.92
CCDC60-201ENST00000327554 SOSTDC1Q6X4U4 206 aa9.29□□□□□ -0.92
CCDC60-201ENST00000327554 FAM19A5Q7Z5A7 132 aaPredicted RBP9.29□□□□□ -0.92
CCDC60-201ENST00000327554 DOPEY2Q9Y3R5 2298 aa9.29□□□□□ -0.92
CCDC60-201ENST00000327554 IGHV3OR16-10A0A075B7F0 116 aa9.29□□□□□ -0.92
CCDC60-201ENST00000327554 IGLV5-45A0A087WSX0 123 aa9.29□□□□□ -0.92
CCDC60-201ENST00000327554 ATP5J2P56134 94 aa9.29□□□□□ -0.92
CCDC60-201ENST00000327554 DEFB123Q8N688 67 aa9.29□□□□□ -0.92
CCDC60-201ENST00000327554 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.28□□□□□ -0.92
CCDC60-201ENST00000327554 IGKV2-29A2NJV5 120 aaPredicted RBP9.28□□□□□ -0.92
CCDC60-201ENST00000327554 K7EMT4 169 aa9.28□□□□□ -0.92
CCDC60-201ENST00000327554 LMO4P61968 165 aa9.28□□□□□ -0.92
CCDC60-201ENST00000327554 SMIM9A6NGZ8 99 aa9.28□□□□□ -0.92
CCDC60-201ENST00000327554 CIRBPQ14011 172 aaKnown RBP9.28□□□□□ -0.92
CCDC60-201ENST00000327554 FAM218AQ96MZ4 157 aa9.28□□□□□ -0.92
CCDC60-201ENST00000327554 FAM222AQ5U5X8 452 aa9.27□□□□□ -0.93
CCDC60-201ENST00000327554 LINC00467Q9BRT7 94 aa9.27□□□□□ -0.93
CCDC60-201ENST00000327554 CCL21O00585 134 aa9.27□□□□□ -0.93
CCDC60-201ENST00000327554 GAGE2AQ6NT46 116 aa9.27□□□□□ -0.93
CCDC60-201ENST00000327554 Q9H8V8 135 aa9.27□□□□□ -0.93
CCDC60-201ENST00000327554 CYSTM1Q9H1C7 97 aa9.26□□□□□ -0.93
CCDC60-201ENST00000327554 CELSR1Q9NYQ6 3014 aa9.26□□□□□ -0.93
CCDC60-201ENST00000327554 IGLV5-39A0A0G2JS06 123 aa9.26□□□□□ -0.93
CCDC60-201ENST00000327554 A0A0U1RRA0 63 aa9.26□□□□□ -0.93
CCDC60-201ENST00000327554 A0A1W2PPR1 153 aa9.26□□□□□ -0.93
CCDC60-201ENST00000327554 RPS28P62857 69 aaKnown RBP9.26□□□□□ -0.93
CCDC60-201ENST00000327554 COX6A2Q02221 97 aa9.26□□□□□ -0.93
CCDC60-201ENST00000327554 Q6ZSN1 163 aa9.26□□□□□ -0.93
CCDC60-201ENST00000327554 ZNF625Q96I27 306 aaPredicted RBP9.26□□□□□ -0.93
CCDC60-201ENST00000327554 UBTD1Q9HAC8 227 aa9.26□□□□□ -0.93
CCDC60-201ENST00000327554 ABCA2Q9BZC7 2435 aa9.25□□□□□ -0.93
CCDC60-201ENST00000327554 ATOX1O00244 68 aa9.25□□□□□ -0.93
CCDC60-201ENST00000327554 IGLV1-40P01703 118 aa9.25□□□□□ -0.93
CCDC60-201ENST00000327554 RBMY1A1P0DJD3 496 aaKnown RBP9.25□□□□□ -0.93
CCDC60-201ENST00000327554 RBMY1CP0DJD4 496 aa9.25□□□□□ -0.93
CCDC60-201ENST00000327554 RBMY1FQ15415 496 aaKnown RBP9.25□□□□□ -0.93
CCDC60-201ENST00000327554 TLN1Q9Y490 2541 aaKnown RBP9.25□□□□□ -0.93
CCDC60-201ENST00000327554 hADV29S1A0JD25 119 aa9.25□□□□□ -0.93
CCDC60-201ENST00000327554 INAFM2P0DMQ5 153 aa9.25□□□□□ -0.93
CCDC60-201ENST00000327554 BRD3OSQ6XYD6 125 aa9.25□□□□□ -0.93
CCDC60-201ENST00000327554 KNCNA6PVL3 124 aa9.24□□□□□ -0.93
CCDC60-201ENST00000327554 K7EQG2 157 aa9.24□□□□□ -0.93
CCDC60-201ENST00000327554 LY6EQ16553 131 aa9.24□□□□□ -0.93
CCDC60-201ENST00000327554 SNRPD3P62318 126 aaKnown RBP9.24□□□□□ -0.93
CCDC60-201ENST00000327554 RNF152Q8N8N0 203 aa9.24□□□□□ -0.93
CCDC60-201ENST00000327554 BPESC1Q9GZL8 116 aa9.24□□□□□ -0.93
CCDC60-201ENST00000327554 COL6A6A6NMZ7 2263 aa9.24□□□□□ -0.93
CCDC60-201ENST00000327554 PTPRZ1P23471 2315 aaPredicted RBP9.24□□□□□ -0.93
CCDC60-201ENST00000327554 BLCAPP62952 87 aa9.23□□□□□ -0.93
CCDC60-201ENST00000327554 SORL1Q92673 2214 aa9.22□□□□□ -0.93
CCDC60-201ENST00000327554 IGHV3OR16-12A0A075B7B8 117 aa9.22□□□□□ -0.93
CCDC60-201ENST00000327554 IGHV3-38A0A0C4DH36 116 aa9.22□□□□□ -0.93
CCDC60-201ENST00000327554 ADORA2A-AS1P86434 159 aa9.22□□□□□ -0.93
CCDC60-201ENST00000327554 PRORYQ9H606 182 aa9.22□□□□□ -0.93
CCDC60-201ENST00000327554 MALP21145 153 aa9.22□□□□□ -0.93
CCDC60-201ENST00000327554 CFHR3Q02985 330 aa9.22□□□□□ -0.93
CCDC60-201ENST00000327554 COPS9Q8WXC6 57 aa9.22□□□□□ -0.93
CCDC60-201ENST00000327554 Q9HAA7 133 aa9.22□□□□□ -0.93
CCDC60-201ENST00000327554 ZNF292O60281 2723 aa9.21□□□□□ -0.93
CCDC60-201ENST00000327554 RPL18AQ02543 176 aaKnown RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms