RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 IGKV2-29A2NJV5 120 aaPredicted RBP10.56□□□□□ -0.72
CHRNA3-201ENST00000326828 ITPR1Q14643 2758 aa10.56□□□□□ -0.72
CHRNA3-201ENST00000326828 H7C423 109 aa10.56□□□□□ -0.72
CHRNA3-201ENST00000326828 I3L3M4 83 aa10.56□□□□□ -0.72
CHRNA3-201ENST00000326828 LGALS9O00182 355 aa10.56□□□□□ -0.72
CHRNA3-201ENST00000326828 PTPN13Q12923 2485 aa10.55□□□□□ -0.72
CHRNA3-201ENST00000326828 NXPH4O95158 308 aa10.55□□□□□ -0.72
CHRNA3-201ENST00000326828 COX6CP09669 75 aa10.55□□□□□ -0.72
CHRNA3-201ENST00000326828 RPL13AP40429 203 aaKnown RBP10.55□□□□□ -0.72
CHRNA3-201ENST00000326828 HERV-K104P63124 156 aa10.55□□□□□ -0.72
CHRNA3-201ENST00000326828 MEIG1Q5JSS6 88 aa10.54□□□□□ -0.72
CHRNA3-201ENST00000326828 K7ENP7 123 aa10.54□□□□□ -0.72
CHRNA3-201ENST00000326828 IGHV1OR15-1A0A075B7D0 117 aa10.53□□□□□ -0.72
CHRNA3-201ENST00000326828 DCANP1Q8TF63 244 aa10.53□□□□□ -0.72
CHRNA3-201ENST00000326828 FAM208BQ5VWN6 2430 aa10.53□□□□□ -0.72
CHRNA3-201ENST00000326828 IGHV1-69P01742 117 aa10.53□□□□□ -0.72
CHRNA3-201ENST00000326828 JMJD1CQ15652 2540 aa10.53□□□□□ -0.72
CHRNA3-201ENST00000326828 FBXL19-AS1Q494R0 122 aa10.52□□□□□ -0.72
CHRNA3-201ENST00000326828 NSUN5P1Q3KNT7 163 aa10.52□□□□□ -0.73
CHRNA3-201ENST00000326828 POM121L12Q8N7R1 296 aa10.52□□□□□ -0.73
CHRNA3-201ENST00000326828 TNFRSF18Q9Y5U5 241 aa10.52□□□□□ -0.73
CHRNA3-201ENST00000326828 SYNJ2BPP57105 145 aa10.52□□□□□ -0.73
CHRNA3-201ENST00000326828 SHISA2Q6UWI4 295 aa10.52□□□□□ -0.73
CHRNA3-201ENST00000326828 RHOHQ15669 191 aa10.51□□□□□ -0.73
CHRNA3-201ENST00000326828 TRBV7-9A0A0J9YWB2 115 aa10.51□□□□□ -0.73
CHRNA3-201ENST00000326828 SNRPD3P62318 126 aaKnown RBP10.51□□□□□ -0.73
CHRNA3-201ENST00000326828 RPL32P62910 135 aaKnown RBP10.51□□□□□ -0.73
CHRNA3-201ENST00000326828 HIST2H2BDQ6DRA6 164 aa10.51□□□□□ -0.73
CHRNA3-201ENST00000326828 APRG1Q8IVJ8 170 aa10.51□□□□□ -0.73
CHRNA3-201ENST00000326828 USMG5Q96IX5 58 aa10.51□□□□□ -0.73
CHRNA3-201ENST00000326828 TRGV11A0A075B6L2 103 aa10.5□□□□□ -0.73
CHRNA3-201ENST00000326828 TRBV6-5A0A0K0K1A5 114 aa10.5□□□□□ -0.73
CHRNA3-201ENST00000326828 TRBV30A0A0K0K1B3 111 aa10.5□□□□□ -0.73
CHRNA3-201ENST00000326828 C9orf85Q96MD7 179 aa10.5□□□□□ -0.73
CHRNA3-201ENST00000326828 LITAFQ99732 161 aa10.5□□□□□ -0.73
CHRNA3-201ENST00000326828 FLNCQ14315 2725 aa10.5□□□□□ -0.73
CHRNA3-201ENST00000326828 IGHV4-61A0A0C4DH41 118 aa10.5□□□□□ -0.73
CHRNA3-201ENST00000326828 C19orf54Q5BKX5 351 aa10.5□□□□□ -0.73
CHRNA3-201ENST00000326828 MYO18BQ8IUG5 2567 aa10.5□□□□□ -0.73
CHRNA3-201ENST00000326828 ACACBO00763 2458 aa10.49□□□□□ -0.73
CHRNA3-201ENST00000326828 A0A0J9YX75 114 aa10.48□□□□□ -0.73
CHRNA3-201ENST00000326828 IGHV1-58A0A0C4DH39 117 aa10.48□□□□□ -0.73
CHRNA3-201ENST00000326828 RS1O15537 224 aa10.48□□□□□ -0.73
CHRNA3-201ENST00000326828 Q6ZSN1 163 aa10.48□□□□□ -0.73
CHRNA3-201ENST00000326828 CDKN2A-AS1Q9UH64 79 aa10.48□□□□□ -0.73
CHRNA3-201ENST00000326828 IGHG2P01859 326 aa10.48□□□□□ -0.73
CHRNA3-201ENST00000326828 KLK9Q2XQG4 91 aa10.48□□□□□ -0.73
CHRNA3-201ENST00000326828 DGAT2L7PQ6IED9 249 aa10.48□□□□□ -0.73
CHRNA3-201ENST00000326828 SONP18583 2426 aaKnown RBP10.47□□□□□ -0.73
CHRNA3-201ENST00000326828 FAM236AA0A1B0GUQ0 79 aa10.47□□□□□ -0.73
CHRNA3-201ENST00000326828 FAM236BA0A1B0GV22 79 aa10.47□□□□□ -0.73
CHRNA3-201ENST00000326828 MIAQ16674 131 aa10.47□□□□□ -0.73
CHRNA3-201ENST00000326828 NDUFA7O95182 113 aa10.46□□□□□ -0.73
CHRNA3-201ENST00000326828 VSIG2Q96IQ7 327 aa10.46□□□□□ -0.73
CHRNA3-201ENST00000326828 IGHV3OR16-12A0A075B7B8 117 aa10.46□□□□□ -0.73
CHRNA3-201ENST00000326828 RBMY1A1P0DJD3 496 aaKnown RBP10.46□□□□□ -0.73
CHRNA3-201ENST00000326828 RBMY1CP0DJD4 496 aa10.46□□□□□ -0.73
CHRNA3-201ENST00000326828 LY6DQ14210 128 aa10.46□□□□□ -0.73
CHRNA3-201ENST00000326828 RBMY1FQ15415 496 aaKnown RBP10.46□□□□□ -0.73
CHRNA3-201ENST00000326828 FBN2P35556 2912 aa10.46□□□□□ -0.73
CHRNA3-201ENST00000326828 TMEM61Q8N0U2 210 aa10.46□□□□□ -0.74
CHRNA3-201ENST00000326828 LINC00467Q9BRT7 94 aa10.46□□□□□ -0.74
CHRNA3-201ENST00000326828 C19orf84I3L1E1 186 aa10.45□□□□□ -0.74
CHRNA3-201ENST00000326828 FAM104AQ969W3 186 aa10.45□□□□□ -0.74
CHRNA3-201ENST00000326828 MXRA5Q9NR99 2828 aa10.45□□□□□ -0.74
CHRNA3-201ENST00000326828 NIPBLQ6KC79 2804 aaeCLIP10.45□□□□□ -0.74
CHRNA3-201ENST00000326828 CHD6Q8TD26 2715 aa10.44□□□□□ -0.74
CHRNA3-201ENST00000326828 TRAV13-1A0A0B4J241 112 aa10.44□□□□□ -0.74
CHRNA3-201ENST00000326828 MRPS36P82909 103 aaKnown RBP10.44□□□□□ -0.74
CHRNA3-201ENST00000326828 DEFB136Q30KP8 78 aa10.44□□□□□ -0.74
CHRNA3-201ENST00000326828 Q9H8V8 135 aa10.44□□□□□ -0.74
CHRNA3-201ENST00000326828 EPG5Q9HCE0 2579 aa10.44□□□□□ -0.74
CHRNA3-201ENST00000326828 LST1O00453 97 aa10.44□□□□□ -0.74
CHRNA3-201ENST00000326828 HOXD3P31249 432 aaPredicted RBP10.44□□□□□ -0.74
CHRNA3-201ENST00000326828 DEFB131AP59861 70 aa10.43□□□□□ -0.74
CHRNA3-201ENST00000326828 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.43□□□□□ -0.74
CHRNA3-201ENST00000326828 MAPK1IP1LQ8NDC0 245 aa10.43□□□□□ -0.74
CHRNA3-201ENST00000326828 CFAP46Q8IYW2 2715 aa10.43□□□□□ -0.74
CHRNA3-201ENST00000326828 PKD1L2Q7Z442 2459 aa10.43□□□□□ -0.74
CHRNA3-201ENST00000326828 IGHV4-59P01825 116 aa10.43□□□□□ -0.74
CHRNA3-201ENST00000326828 KLRB1Q12918 225 aa10.43□□□□□ -0.74
CHRNA3-201ENST00000326828 Q8N2B8 174 aa10.43□□□□□ -0.74
CHRNA3-201ENST00000326828 H3BT86 120 aa10.42□□□□□ -0.74
CHRNA3-201ENST00000326828 AVPP01185 164 aa10.42□□□□□ -0.74
CHRNA3-201ENST00000326828 COX6A2Q02221 97 aa10.42□□□□□ -0.74
CHRNA3-201ENST00000326828 IGKV3OR2-268A0A0C4DH90 116 aa10.41□□□□□ -0.74
CHRNA3-201ENST00000326828 A6NDX4 124 aa10.41□□□□□ -0.74
CHRNA3-201ENST00000326828 IGHV3-53P01767 116 aa10.41□□□□□ -0.74
CHRNA3-201ENST00000326828 CFHR3Q02985 330 aa10.41□□□□□ -0.74
CHRNA3-201ENST00000326828 Q9HAA7 133 aa10.41□□□□□ -0.74
CHRNA3-201ENST00000326828 K7EQG2 157 aa10.41□□□□□ -0.74
CHRNA3-201ENST00000326828 CITED2Q99967 270 aaPredicted RBP10.41□□□□□ -0.74
CHRNA3-201ENST00000326828 ABCA12Q86UK0 2595 aa10.4□□□□□ -0.74
CHRNA3-201ENST00000326828 M0QXV9 152 aa10.4□□□□□ -0.74
CHRNA3-201ENST00000326828 IGLV1-40P01703 118 aa10.4□□□□□ -0.74
CHRNA3-201ENST00000326828 KHDC1LQ5JSQ8 128 aa10.4□□□□□ -0.74
CHRNA3-201ENST00000326828 TMEM101Q96IK0 257 aa10.4□□□□□ -0.74
CHRNA3-201ENST00000326828 UBE2D4Q9Y2X8 147 aa10.4□□□□□ -0.74
CHRNA3-201ENST00000326828 CIRBPQ14011 172 aaKnown RBP10.4□□□□□ -0.74
CHRNA3-201ENST00000326828 SPANXDQ9BXN6 97 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms