RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 IL17DQ8TAD2 202 aa15.5■□□□□ 0.07
LIMS2-201ENST00000324938 ACANP16112 2415 aa15.5■□□□□ 0.07
LIMS2-201ENST00000324938 AZU1P20160 251 aa15.5■□□□□ 0.07
LIMS2-201ENST00000324938 ANK3Q12955 4377 aaKnown RBP15.5■□□□□ 0.07
LIMS2-201ENST00000324938 CUBNO60494 3623 aa15.5■□□□□ 0.07
LIMS2-201ENST00000324938 A0A0J9YY99 117 aa15.49■□□□□ 0.07
LIMS2-201ENST00000324938 TMEM223A0PJW6 202 aa15.49■□□□□ 0.07
LIMS2-201ENST00000324938 CRYBA4P53673 196 aa15.49■□□□□ 0.07
LIMS2-201ENST00000324938 RBX1P62877 108 aa15.49■□□□□ 0.07
LIMS2-201ENST00000324938 FAM104AQ969W3 186 aa15.49■□□□□ 0.07
LIMS2-201ENST00000324938 ZNF22P17026 224 aaPredicted RBP15.49■□□□□ 0.07
LIMS2-201ENST00000324938 OCIAD2Q56VL3 154 aa15.49■□□□□ 0.07
LIMS2-201ENST00000324938 AMELXQ99217 191 aa15.49■□□□□ 0.07
LIMS2-201ENST00000324938 ITPR2Q14571 2701 aa15.48■□□□□ 0.07
LIMS2-201ENST00000324938 J3QQQ9 107 aa15.48■□□□□ 0.07
LIMS2-201ENST00000324938 CHCHD7Q9BUK0 85 aa15.48■□□□□ 0.07
LIMS2-201ENST00000324938 ZNF479Q96JC4 524 aa15.47■□□□□ 0.07
LIMS2-201ENST00000324938 A0A0J9YXV3 536 aa15.47■□□□□ 0.07
LIMS2-201ENST00000324938 TMEM238LA0A1B0GVL6 79 aa15.47■□□□□ 0.07
LIMS2-201ENST00000324938 A6NJY4 79 aa15.47■□□□□ 0.07
LIMS2-201ENST00000324938 LEPROTO15243 131 aa15.47■□□□□ 0.07
LIMS2-201ENST00000324938 CMC4P56277 68 aaPredicted RBP15.47■□□□□ 0.07
LIMS2-201ENST00000324938 SRSF9Q13242 221 aaKnown RBP eCLIP15.47■□□□□ 0.07
LIMS2-201ENST00000324938 ZNF418Q8TF45 676 aaPredicted RBP15.47■□□□□ 0.07
LIMS2-201ENST00000324938 SPANXB1Q9NS25 103 aaPredicted RBP15.47■□□□□ 0.07
LIMS2-201ENST00000324938 HILS1P60008 231 aa15.46■□□□□ 0.07
LIMS2-201ENST00000324938 IGHV3OR16-12A0A075B7B8 117 aa15.46■□□□□ 0.06
LIMS2-201ENST00000324938 SAP30O75446 220 aa15.46■□□□□ 0.06
LIMS2-201ENST00000324938 LGALS3P17931 250 aaKnown RBP15.46■□□□□ 0.06
LIMS2-201ENST00000324938 CBY1Q9Y3M2 126 aa15.46■□□□□ 0.06
LIMS2-201ENST00000324938 RRN3P1Q2M238 152 aa15.45■□□□□ 0.06
LIMS2-201ENST00000324938 SPANXA1Q9NS26 97 aa15.45■□□□□ 0.06
LIMS2-201ENST00000324938 HELZ2Q9BYK8 2649 aaKnown RBP15.44■□□□□ 0.06
LIMS2-201ENST00000324938 MRPS36P82909 103 aaKnown RBP15.44■□□□□ 0.06
LIMS2-201ENST00000324938 SLC25A29Q8N8R3 303 aa15.44■□□□□ 0.06
LIMS2-201ENST00000324938 UBE2D4Q9Y2X8 147 aa15.44■□□□□ 0.06
LIMS2-201ENST00000324938 IGLV1-51P01701 117 aa15.43■□□□□ 0.06
LIMS2-201ENST00000324938 UBE2D1P51668 147 aa15.43■□□□□ 0.06
LIMS2-201ENST00000324938 CEMP1Q6PRD7 247 aaPredicted RBP15.43■□□□□ 0.06
LIMS2-201ENST00000324938 FAM110AQ9BQ89 295 aa15.43■□□□□ 0.06
LIMS2-201ENST00000324938 MTORP42345 2549 aa15.43■□□□□ 0.06
LIMS2-201ENST00000324938 ADARB2-AS1A8MUL3 147 aa15.43■□□□□ 0.06
LIMS2-201ENST00000324938 NDUFA7O95182 113 aa15.43■□□□□ 0.06
LIMS2-201ENST00000324938 TMEM263Q8WUH6 116 aaKnown RBP15.43■□□□□ 0.06
LIMS2-201ENST00000324938 UNC79Q9P2D8 2635 aa15.43■□□□□ 0.06
LIMS2-201ENST00000324938 TRGV1A0A0A0MS02 117 aa15.42■□□□□ 0.06
LIMS2-201ENST00000324938 COTL1Q14019 142 aa15.42■□□□□ 0.06
LIMS2-201ENST00000324938 SETD2Q9BYW2 2564 aaPredicted RBP15.41■□□□□ 0.06
LIMS2-201ENST00000324938 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.4■□□□□ 0.06
LIMS2-201ENST00000324938 IGHV3-38A0A0C4DH36 116 aa15.4■□□□□ 0.06
LIMS2-201ENST00000324938 IGKV2-29A2NJV5 120 aaPredicted RBP15.4■□□□□ 0.06
LIMS2-201ENST00000324938 K7ERU9 68 aa15.4■□□□□ 0.06
LIMS2-201ENST00000324938 IGHV3-30P01768 117 aa15.4■□□□□ 0.06
LIMS2-201ENST00000324938 GIG44P09565 113 aaPredicted RBP15.4■□□□□ 0.06
LIMS2-201ENST00000324938 IGHV3-30-5P0DP03 117 aa15.4■□□□□ 0.06
LIMS2-201ENST00000324938 SETXQ7Z333 2677 aaKnown RBP15.39■□□□□ 0.05
LIMS2-201ENST00000324938 C19orf73Q9NVV2 129 aa15.39■□□□□ 0.05
LIMS2-201ENST00000324938 IGHV3-64A0A075B6Q5 118 aa15.38■□□□□ 0.05
LIMS2-201ENST00000324938 RNASE13Q5GAN3 156 aaKnown RBP15.38■□□□□ 0.05
LIMS2-201ENST00000324938 Q6ZTI0 123 aa15.38■□□□□ 0.05
LIMS2-201ENST00000324938 Q6ZUT4 128 aa15.37■□□□□ 0.05
LIMS2-201ENST00000324938 WFDC10AQ9H1F0 79 aa15.37■□□□□ 0.05
LIMS2-201ENST00000324938 PGPEP1Q9NXJ5 209 aa15.37■□□□□ 0.05
LIMS2-201ENST00000324938 TRAV4A0A0B4J268 109 aa15.37■□□□□ 0.05
LIMS2-201ENST00000324938 TINCRA0A1B0GVN0 87 aa15.37■□□□□ 0.05
LIMS2-201ENST00000324938 RNF151Q2KHN1 245 aa15.37■□□□□ 0.05
LIMS2-201ENST00000324938 TIMM21Q9BVV7 248 aa15.36■□□□□ 0.05
LIMS2-201ENST00000324938 TRBV10-1A0A0K0K1A3 114 aa15.35■□□□□ 0.05
LIMS2-201ENST00000324938 K7EQD1 137 aa15.35■□□□□ 0.05
LIMS2-201ENST00000324938 IGHV3-30-3P0DP02 117 aa15.35■□□□□ 0.05
LIMS2-201ENST00000324938 DAZ2Q13117 558 aaKnown RBP15.35■□□□□ 0.05
LIMS2-201ENST00000324938 C16orf74Q96GX8 76 aa15.34■□□□□ 0.05
LIMS2-201ENST00000324938 NDUFA11Q86Y39 141 aa15.34■□□□□ 0.05
LIMS2-201ENST00000324938 JMJD1CQ15652 2540 aa15.33■□□□□ 0.04
LIMS2-201ENST00000324938 RPL36AP83881 106 aaKnown RBP15.33■□□□□ 0.04
LIMS2-201ENST00000324938 C10orf126Q8N4M7 172 aa15.33■□□□□ 0.04
LIMS2-201ENST00000324938 RPL36ALQ969Q0 106 aaKnown RBP15.33■□□□□ 0.04
LIMS2-201ENST00000324938 SMR3AQ99954 134 aa15.33■□□□□ 0.04
LIMS2-201ENST00000324938 C1QTNF4Q9BXJ3 329 aa15.33■□□□□ 0.04
LIMS2-201ENST00000324938 IGHV1-58A0A0C4DH39 117 aa15.32■□□□□ 0.04
LIMS2-201ENST00000324938 PLAC8L1A1L4L8 177 aa15.32■□□□□ 0.04
LIMS2-201ENST00000324938 APOMO95445 188 aa15.32■□□□□ 0.04
LIMS2-201ENST00000324938 TSPAN13O95857 204 aa15.32■□□□□ 0.04
LIMS2-201ENST00000324938 RPL35AP18077 110 aaKnown RBP15.32■□□□□ 0.04
LIMS2-201ENST00000324938 NOP10Q9NPE3 64 aaKnown RBP15.32■□□□□ 0.04
LIMS2-201ENST00000324938 NIPBLQ6KC79 2804 aaeCLIP15.32■□□□□ 0.04
LIMS2-201ENST00000324938 CSNK1G2-AS1Q8NCQ2 148 aa15.31■□□□□ 0.04
LIMS2-201ENST00000324938 TRAV8-3A0A0A6YYJ7 113 aa15.31■□□□□ 0.04
LIMS2-201ENST00000324938 TMEM238C9JI98 176 aa15.31■□□□□ 0.04
LIMS2-201ENST00000324938 F8W1H4 67 aa15.31■□□□□ 0.04
LIMS2-201ENST00000324938 H3BMG7 143 aa15.31■□□□□ 0.04
LIMS2-201ENST00000324938 CFC1BP0CG36 223 aa15.31■□□□□ 0.04
LIMS2-201ENST00000324938 CFC1P0CG37 223 aa15.31■□□□□ 0.04
LIMS2-201ENST00000324938 A0A0J9YXY3 114 aa15.3■□□□□ 0.04
LIMS2-201ENST00000324938 FASNP49327 2511 aaKnown RBP15.3■□□□□ 0.04
LIMS2-201ENST00000324938 DAZ4Q86SG3 579 aaKnown RBP15.3■□□□□ 0.04
LIMS2-201ENST00000324938 DAZ3Q9NR90 486 aaKnown RBP15.3■□□□□ 0.04
LIMS2-201ENST00000324938 VSIG2Q96IQ7 327 aa15.29■□□□□ 0.04
LIMS2-201ENST00000324938 HIVEP2P31629 2446 aa15.29■□□□□ 0.04
LIMS2-201ENST00000324938 UBE2D3P61077 147 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms