RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 IGLV2-11P01706 119 aa9.4□□□□□ -0.9
CCDC149-201ENST00000324309 COX8CQ7Z4L0 72 aa9.4□□□□□ -0.9
CCDC149-201ENST00000324309 CITED1Q99966 193 aa9.4□□□□□ -0.9
CCDC149-201ENST00000324309 A0A0J9YXV3 536 aa9.4□□□□□ -0.91
CCDC149-201ENST00000324309 KIR3DS1Q14943 382 aa9.4□□□□□ -0.91
CCDC149-201ENST00000324309 RNASE13Q5GAN3 156 aaKnown RBP9.4□□□□□ -0.91
CCDC149-201ENST00000324309 KLK9Q2XQG4 91 aa9.39□□□□□ -0.91
CCDC149-201ENST00000324309 F8WDY8 70 aa9.39□□□□□ -0.91
CCDC149-201ENST00000324309 IGLV10-54A0A075B6I4 117 aa9.39□□□□□ -0.91
CCDC149-201ENST00000324309 CEND1Q8N111 149 aa9.39□□□□□ -0.91
CCDC149-201ENST00000324309 SPANXDQ9BXN6 97 aa9.39□□□□□ -0.91
CCDC149-201ENST00000324309 ARFGEF3Q5TH69 2177 aa9.38□□□□□ -0.91
CCDC149-201ENST00000324309 E9PLD3 99 aa9.38□□□□□ -0.91
CCDC149-201ENST00000324309 DKK2Q9UBU2 259 aa9.38□□□□□ -0.91
CCDC149-201ENST00000324309 TRBV27A0A0K0K1C4 114 aa9.38□□□□□ -0.91
CCDC149-201ENST00000324309 BEAN1Q3B7T3 259 aa9.38□□□□□ -0.91
CCDC149-201ENST00000324309 A0A0J9YWU9 116 aa9.38□□□□□ -0.91
CCDC149-201ENST00000324309 SOCS3O14543 225 aa9.38□□□□□ -0.91
CCDC149-201ENST00000324309 MED13LQ71F56 2210 aa9.38□□□□□ -0.91
CCDC149-201ENST00000324309 ATRXP46100 2492 aa9.38□□□□□ -0.91
CCDC149-201ENST00000324309 CNFNQ9BYD5 112 aa9.37□□□□□ -0.91
CCDC149-201ENST00000324309 MRPS36P82909 103 aaKnown RBP9.37□□□□□ -0.91
CCDC149-201ENST00000324309 PYY3Q5JQD4 70 aa9.37□□□□□ -0.91
CCDC149-201ENST00000324309 CHCHD10Q8WYQ3 142 aaPredicted RBP9.37□□□□□ -0.91
CCDC149-201ENST00000324309 LINC00474Q9P2X8 69 aa9.37□□□□□ -0.91
CCDC149-201ENST00000324309 SPATA12Q7Z6I5 190 aa9.37□□□□□ -0.91
CCDC149-201ENST00000324309 PRRC2AP48634 2157 aaKnown RBP9.36□□□□□ -0.91
CCDC149-201ENST00000324309 ZNF124Q15973 351 aa9.36□□□□□ -0.91
CCDC149-201ENST00000324309 K7EP13 123 aa9.36□□□□□ -0.91
CCDC149-201ENST00000324309 IGLC3P0DOY3 106 aa9.36□□□□□ -0.91
CCDC149-201ENST00000324309 HIGD1BQ9P298 99 aa9.36□□□□□ -0.91
CCDC149-201ENST00000324309 UBE2AP49459 152 aa9.36□□□□□ -0.91
CCDC149-201ENST00000324309 GAGE2BQ13066 116 aa9.36□□□□□ -0.91
CCDC149-201ENST00000324309 RNASE3P12724 160 aaKnown RBP9.36□□□□□ -0.91
CCDC149-201ENST00000324309 LINC00269Q8N2A0 174 aa9.36□□□□□ -0.91
CCDC149-201ENST00000324309 Q8N976 141 aa9.36□□□□□ -0.91
CCDC149-201ENST00000324309 DLEU1O43261 78 aa9.35□□□□□ -0.91
CCDC149-201ENST00000324309 SND1-IT1Q9HBX3 110 aa9.35□□□□□ -0.91
CCDC149-201ENST00000324309 MPV17L2Q567V2 206 aa9.35□□□□□ -0.91
CCDC149-201ENST00000324309 B9D2Q9BPU9 175 aa9.35□□□□□ -0.91
CCDC149-201ENST00000324309 RPL39P62891 51 aaKnown RBP9.35□□□□□ -0.91
CCDC149-201ENST00000324309 SPG11Q96JI7 2443 aa9.35□□□□□ -0.91
CCDC149-201ENST00000324309 DOPEY2Q9Y3R5 2298 aa9.34□□□□□ -0.91
CCDC149-201ENST00000324309 CRIP1P50238 77 aa9.34□□□□□ -0.91
CCDC149-201ENST00000324309 Q6ZUT4 128 aa9.34□□□□□ -0.91
CCDC149-201ENST00000324309 C7orf33Q8WU49 177 aa9.34□□□□□ -0.91
CCDC149-201ENST00000324309 GAGE2EQ4V326 116 aa9.34□□□□□ -0.91
CCDC149-201ENST00000324309 LINC00322Q6ZN03 302 aaPredicted RBP9.34□□□□□ -0.91
CCDC149-201ENST00000324309 GAGE2DQ9UEU5 116 aa9.34□□□□□ -0.91
CCDC149-201ENST00000324309 CARD19Q96LW7 228 aa9.34□□□□□ -0.91
CCDC149-201ENST00000324309 DSCR8Q96T75 97 aa9.33□□□□□ -0.92
CCDC149-201ENST00000324309 CD164L2Q6UWJ8 174 aa9.33□□□□□ -0.92
CCDC149-201ENST00000324309 A0A0J9YXY3 114 aa9.33□□□□□ -0.92
CCDC149-201ENST00000324309 UBE2D3P61077 147 aa9.33□□□□□ -0.92
CCDC149-201ENST00000324309 UBE2D2P62837 147 aa9.33□□□□□ -0.92
CCDC149-201ENST00000324309 KRTAP24-1Q3LI83 254 aa9.33□□□□□ -0.92
CCDC149-201ENST00000324309 TLN1Q9Y490 2541 aaKnown RBP9.32□□□□□ -0.92
CCDC149-201ENST00000324309 ORMDL1Q9P0S3 153 aa9.32□□□□□ -0.92
CCDC149-201ENST00000324309 NOTCH2Q04721 2471 aa9.32□□□□□ -0.92
CCDC149-201ENST00000324309 WFDC10AQ9H1F0 79 aa9.32□□□□□ -0.92
CCDC149-201ENST00000324309 C4orf48Q5BLP8 95 aa9.31□□□□□ -0.92
CCDC149-201ENST00000324309 DIRC1Q969H9 104 aa9.31□□□□□ -0.92
CCDC149-201ENST00000324309 PTPN13Q12923 2485 aa9.31□□□□□ -0.92
CCDC149-201ENST00000324309 A4D1N5 150 aa9.31□□□□□ -0.92
CCDC149-201ENST00000324309 IBA57-AS1B1ANH7 110 aa9.31□□□□□ -0.92
CCDC149-201ENST00000324309 CFC1BP0CG36 223 aa9.31□□□□□ -0.92
CCDC149-201ENST00000324309 CFC1P0CG37 223 aa9.31□□□□□ -0.92
CCDC149-201ENST00000324309 NANOS2P60321 138 aaKnown RBP9.3□□□□□ -0.92
CCDC149-201ENST00000324309 OPRPNQ99935 248 aaPredicted RBP9.3□□□□□ -0.92
CCDC149-201ENST00000324309 ODF1Q14990 250 aa9.3□□□□□ -0.92
CCDC149-201ENST00000324309 A0A1B0GV90 55 aa9.3□□□□□ -0.92
CCDC149-201ENST00000324309 C9orf118A6NHY6 69 aa9.3□□□□□ -0.92
CCDC149-201ENST00000324309 RBMY1FQ15415 496 aaKnown RBP9.3□□□□□ -0.92
CCDC149-201ENST00000324309 SYCNQ0VAF6 134 aa9.3□□□□□ -0.92
CCDC149-201ENST00000324309 RBX1P62877 108 aa9.3□□□□□ -0.92
CCDC149-201ENST00000324309 RNASE8Q8TDE3 154 aaKnown RBP9.29□□□□□ -0.92
CCDC149-201ENST00000324309 RNF185Q96GF1 192 aa9.29□□□□□ -0.92
CCDC149-201ENST00000324309 LY6G6CO95867 125 aa9.29□□□□□ -0.92
CCDC149-201ENST00000324309 PRR9Q5T870 116 aa9.29□□□□□ -0.92
CCDC149-201ENST00000324309 IGLV4-69A0A075B6H9 119 aa9.29□□□□□ -0.92
CCDC149-201ENST00000324309 IGLV4-3A0A075B6K6 122 aa9.29□□□□□ -0.92
CCDC149-201ENST00000324309 SPATA3Q8NHX4 192 aa9.29□□□□□ -0.92
CCDC149-201ENST00000324309 C1orf158Q8N1D5 194 aa9.28□□□□□ -0.92
CCDC149-201ENST00000324309 A0A096LNT2 108 aa9.28□□□□□ -0.92
CCDC149-201ENST00000324309 LOC107984640A0A0U1RRK4 108 aa9.28□□□□□ -0.92
CCDC149-201ENST00000324309 TANC2Q9HCD6 1990 aa9.28□□□□□ -0.92
CCDC149-201ENST00000324309 C9JAW5 83 aa9.27□□□□□ -0.92
CCDC149-201ENST00000324309 H3BNG1 76 aa9.27□□□□□ -0.92
CCDC149-201ENST00000324309 FUSP35637 526 aaKnown RBP eCLIP9.27□□□□□ -0.92
CCDC149-201ENST00000324309 WFDC9Q8NEX5 89 aa9.27□□□□□ -0.93
CCDC149-201ENST00000324309 UBL5Q9BZL1 73 aa9.27□□□□□ -0.93
CCDC149-201ENST00000324309 POLR2KP53803 58 aaKnown RBP9.27□□□□□ -0.93
CCDC149-201ENST00000324309 ZNF706Q9Y5V0 76 aaPredicted RBP9.26□□□□□ -0.93
CCDC149-201ENST00000324309 TSHBP01222 138 aa9.26□□□□□ -0.93
CCDC149-201ENST00000324309 COX17Q14061 63 aa9.26□□□□□ -0.93
CCDC149-201ENST00000324309 PRR14LQ5THK1 2151 aa9.26□□□□□ -0.93
CCDC149-201ENST00000324309 TIMM17BO60830 172 aa9.26□□□□□ -0.93
CCDC149-201ENST00000324309 LINC01561Q8N1V8 128 aa9.25□□□□□ -0.93
CCDC149-201ENST00000324309 C12orf74Q32Q52 190 aa9.25□□□□□ -0.93
CCDC149-201ENST00000324309 OCIAD2Q56VL3 154 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms