RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 TRBV25-1A0A075B6N4 114 aa7.97□□□□□ -1.13
SCFD1-201ENST00000311943 IGKV2D-24A0A075B6R9 120 aa7.97□□□□□ -1.13
SCFD1-201ENST00000311943 RIGQ13278 110 aa7.97□□□□□ -1.13
SCFD1-201ENST00000311943 SMIM15Q7Z3B0 74 aa7.97□□□□□ -1.13
SCFD1-201ENST00000311943 IGHV1-24A0A0C4DH33 117 aa7.96□□□□□ -1.13
SCFD1-201ENST00000311943 BTF3P20290 206 aaKnown RBP7.96□□□□□ -1.13
SCFD1-201ENST00000311943 TMEM70Q9BUB7 260 aa7.96□□□□□ -1.13
SCFD1-201ENST00000311943 CHCHD7Q9BUK0 85 aa7.96□□□□□ -1.13
SCFD1-201ENST00000311943 TMEM242Q9NWH2 141 aa7.96□□□□□ -1.13
SCFD1-201ENST00000311943 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-201ENST00000311943 TSHBP01222 138 aa7.96□□□□□ -1.14
SCFD1-201ENST00000311943 AMTP48728 403 aa7.96□□□□□ -1.14
SCFD1-201ENST00000311943 FAM104BQ5XKR9 115 aa7.96□□□□□ -1.14
SCFD1-201ENST00000311943 IGKV3OR2-268A0A0C4DH90 116 aa7.95□□□□□ -1.14
SCFD1-201ENST00000311943 KRTAP10-1P60331 282 aa7.95□□□□□ -1.14
SCFD1-201ENST00000311943 COTL1Q14019 142 aa7.95□□□□□ -1.14
SCFD1-201ENST00000311943 NFE4Q86UQ8 179 aa7.95□□□□□ -1.14
SCFD1-201ENST00000311943 TMEM243Q9BU79 118 aa7.95□□□□□ -1.14
SCFD1-201ENST00000311943 KRTAP4-5Q9BYR2 181 aa7.95□□□□□ -1.14
SCFD1-201ENST00000311943 POLR2KP53803 58 aaKnown RBP7.95□□□□□ -1.14
SCFD1-201ENST00000311943 LINC00862A6NCI5 91 aa7.94□□□□□ -1.14
SCFD1-201ENST00000311943 D6R8Y8 96 aa7.94□□□□□ -1.14
SCFD1-201ENST00000311943 NPYP01303 97 aa7.94□□□□□ -1.14
SCFD1-201ENST00000311943 PMCHP20382 165 aa7.94□□□□□ -1.14
SCFD1-201ENST00000311943 HBBP68871 147 aa7.94□□□□□ -1.14
SCFD1-201ENST00000311943 LAGE3Q14657 143 aa7.94□□□□□ -1.14
SCFD1-201ENST00000311943 KRTAP26-1Q6PEX3 210 aa7.94□□□□□ -1.14
SCFD1-201ENST00000311943 TRBV6-5A0A0K0K1A5 114 aa7.93□□□□□ -1.14
SCFD1-201ENST00000311943 K7EP13 123 aa7.93□□□□□ -1.14
SCFD1-201ENST00000311943 Q8N814 137 aa7.93□□□□□ -1.14
SCFD1-201ENST00000311943 ST20Q9HBF5 79 aa7.93□□□□□ -1.14
SCFD1-201ENST00000311943 FAT1Q14517 4588 aa7.93□□□□□ -1.14
SCFD1-201ENST00000311943 TRAV8-3A0A0A6YYJ7 113 aa7.93□□□□□ -1.14
SCFD1-201ENST00000311943 PNRC1Q12796 327 aaPredicted RBP7.93□□□□□ -1.14
SCFD1-201ENST00000311943 UQCC3Q6UW78 93 aa7.93□□□□□ -1.14
SCFD1-201ENST00000311943 PCLOQ9Y6V0 5065 aa7.92□□□□□ -1.14
SCFD1-201ENST00000311943 HLA-DQA1P01909 254 aa7.92□□□□□ -1.14
SCFD1-201ENST00000311943 MT-ND4LP03901 98 aa7.92□□□□□ -1.14
SCFD1-201ENST00000311943 REG3AQ06141 175 aa7.92□□□□□ -1.14
SCFD1-201ENST00000311943 RNASE13Q5GAN3 156 aaKnown RBP7.92□□□□□ -1.14
SCFD1-201ENST00000311943 KCNIP4Q6PIL6 250 aa7.92□□□□□ -1.14
SCFD1-201ENST00000311943 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.92□□□□□ -1.14
SCFD1-201ENST00000311943 MRAP2Q96G30 205 aa7.92□□□□□ -1.14
SCFD1-201ENST00000311943 PRR34Q9NV39 138 aa7.92□□□□□ -1.14
SCFD1-201ENST00000311943 I3L3M4 83 aa7.91□□□□□ -1.14
SCFD1-201ENST00000311943 TNFRSF6BO95407 300 aa7.91□□□□□ -1.14
SCFD1-201ENST00000311943 CKS2P33552 79 aa7.91□□□□□ -1.14
SCFD1-201ENST00000311943 NTN5Q8WTR8 489 aaPredicted RBP7.91□□□□□ -1.14
SCFD1-201ENST00000311943 SEC11CQ9BY50 192 aa7.91□□□□□ -1.14
SCFD1-201ENST00000311943 ABCA13Q86UQ4 5058 aa7.91□□□□□ -1.14
SCFD1-201ENST00000311943 TCAPO15273 167 aa7.91□□□□□ -1.14
SCFD1-201ENST00000311943 FGF6P10767 208 aa7.91□□□□□ -1.14
SCFD1-201ENST00000311943 ESDP10768 282 aa7.91□□□□□ -1.14
SCFD1-201ENST00000311943 SUMO2P61956 95 aaKnown RBP7.91□□□□□ -1.14
SCFD1-201ENST00000311943 RNASEKQ6P5S7 137 aaKnown RBP7.91□□□□□ -1.14
SCFD1-201ENST00000311943 ANAPC16Q96DE5 110 aa7.91□□□□□ -1.14
SCFD1-201ENST00000311943 FAM30AQ9NZY2 134 aa7.91□□□□□ -1.14
SCFD1-201ENST00000311943 TRBV27A0A0K0K1C4 114 aa7.9□□□□□ -1.14
SCFD1-201ENST00000311943 C7orf77A4D0Y5 90 aa7.9□□□□□ -1.14
SCFD1-201ENST00000311943 PPP1R2P9O14990 202 aa7.9□□□□□ -1.14
SCFD1-201ENST00000311943 CRPP02741 224 aa7.9□□□□□ -1.14
SCFD1-201ENST00000311943 APCSP02743 223 aa7.9□□□□□ -1.14
SCFD1-201ENST00000311943 KIAA1644Q3SXP7 199 aa7.9□□□□□ -1.14
SCFD1-201ENST00000311943 FRZBQ92765 325 aa7.9□□□□□ -1.14
SCFD1-201ENST00000311943 UBE2L6O14933 153 aa7.9□□□□□ -1.15
SCFD1-201ENST00000311943 TMEM97Q5BJF2 176 aa7.9□□□□□ -1.15
SCFD1-201ENST00000311943 C10orf91Q5T1B1 145 aa7.9□□□□□ -1.15
SCFD1-201ENST00000311943 IMMP2LQ96T52 175 aa7.9□□□□□ -1.15
SCFD1-201ENST00000311943 OPRPNQ99935 248 aaPredicted RBP7.9□□□□□ -1.15
SCFD1-201ENST00000311943 LOC389332A0A1B0GUA5 103 aa7.89□□□□□ -1.15
SCFD1-201ENST00000311943 RPL39P62891 51 aaKnown RBP7.89□□□□□ -1.15
SCFD1-201ENST00000311943 SLC7A5P1Q8MH63 180 aa7.89□□□□□ -1.15
SCFD1-201ENST00000311943 C1orf43Q9BWL3 253 aa7.89□□□□□ -1.15
SCFD1-201ENST00000311943 IGLV5-52A0A0A0MRZ9 124 aa7.88□□□□□ -1.15
SCFD1-201ENST00000311943 XGP55808 180 aa7.88□□□□□ -1.15
SCFD1-201ENST00000311943 A0A1B0GUV1 79 aa7.88□□□□□ -1.15
SCFD1-201ENST00000311943 TMEM136Q6ZRR5 245 aa7.88□□□□□ -1.15
SCFD1-201ENST00000311943 CLRN3Q8NCR9 226 aa7.88□□□□□ -1.15
SCFD1-201ENST00000311943 FAM104AQ969W3 186 aa7.88□□□□□ -1.15
SCFD1-201ENST00000311943 TM2D2Q9BX73 214 aa7.88□□□□□ -1.15
SCFD1-201ENST00000311943 RPS10P5Q9NQ39 176 aa7.88□□□□□ -1.15
SCFD1-201ENST00000311943 DNAH8Q96JB1 4490 aa7.88□□□□□ -1.15
SCFD1-201ENST00000311943 TRBV24-1A0A075B6N3 115 aa7.87□□□□□ -1.15
SCFD1-201ENST00000311943 USP17L23D6RBM5 183 aa7.87□□□□□ -1.15
SCFD1-201ENST00000311943 VCYO14598 125 aa7.87□□□□□ -1.15
SCFD1-201ENST00000311943 APOC3P02656 99 aa7.87□□□□□ -1.15
SCFD1-201ENST00000311943 ELOBQ15370 118 aa7.87□□□□□ -1.15
SCFD1-201ENST00000311943 AMMECR1LQ6DCA0 310 aa7.87□□□□□ -1.15
SCFD1-201ENST00000311943 PGPEP1Q9NXJ5 209 aa7.87□□□□□ -1.15
SCFD1-201ENST00000311943 CARHSP1Q9Y2V2 147 aaKnown RBP7.87□□□□□ -1.15
SCFD1-201ENST00000311943 Q0VG73 95 aa7.86□□□□□ -1.15
SCFD1-201ENST00000311943 BTF3L4Q96K17 158 aa7.86□□□□□ -1.15
SCFD1-201ENST00000311943 PRELID3AQ96N28 172 aa7.86□□□□□ -1.15
SCFD1-201ENST00000311943 A0A1B0GW15 77 aa7.86□□□□□ -1.15
SCFD1-201ENST00000311943 EREGO14944 169 aa7.86□□□□□ -1.15
SCFD1-201ENST00000311943 PRSS1P07477 247 aa7.86□□□□□ -1.15
SCFD1-201ENST00000311943 FCER1GP30273 86 aa7.86□□□□□ -1.15
SCFD1-201ENST00000311943 MIAQ16674 131 aa7.86□□□□□ -1.15
SCFD1-201ENST00000311943 ATP5L2Q7Z4Y8 100 aa7.86□□□□□ -1.15
SCFD1-201ENST00000311943 SMIM2Q9BVW6 85 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms