RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 DEFB104AQ8WTQ1 72 aa14.05□□□□□ -0.16
TRA2A-201ENST00000297071 DNAJC30Q96LL9 226 aa14.05□□□□□ -0.16
TRA2A-201ENST00000297071 NDUFA12Q9UI09 145 aa14.05□□□□□ -0.16
TRA2A-201ENST00000297071 SPINK13Q1W4C9 94 aa14.04□□□□□ -0.16
TRA2A-201ENST00000297071 ELANEP08246 267 aa14.04□□□□□ -0.16
TRA2A-201ENST00000297071 NHLRC4P0CG21 123 aaPredicted RBP14.04□□□□□ -0.16
TRA2A-201ENST00000297071 WFDC12Q8WWY7 111 aa14.04□□□□□ -0.16
TRA2A-201ENST00000297071 SPXQ9BT56 116 aa14.04□□□□□ -0.16
TRA2A-201ENST00000297071 ZNF462Q96JM2 2506 aa14.03□□□□□ -0.16
TRA2A-201ENST00000297071 SPTBN1Q01082 2364 aaKnown RBP14.03□□□□□ -0.16
TRA2A-201ENST00000297071 MSMBP08118 114 aa14.03□□□□□ -0.16
TRA2A-201ENST00000297071 GATA3P23771 443 aa14.03□□□□□ -0.16
TRA2A-201ENST00000297071 NDUFV3P56181 108 aaKnown RBP14.03□□□□□ -0.16
TRA2A-201ENST00000297071 LINC00467Q9BRT7 94 aa14.03□□□□□ -0.16
TRA2A-201ENST00000297071 NACAE9PAV3 2078 aa14.02□□□□□ -0.16
TRA2A-201ENST00000297071 IGHV3-64A0A075B6Q5 118 aa14.02□□□□□ -0.16
TRA2A-201ENST00000297071 H7C2G1 150 aa14.02□□□□□ -0.16
TRA2A-201ENST00000297071 LST1O00453 97 aa14.02□□□□□ -0.16
TRA2A-201ENST00000297071 TIRAPP58753 221 aa14.02□□□□□ -0.16
TRA2A-201ENST00000297071 C2orf82Q6UX34 121 aa14.02□□□□□ -0.16
TRA2A-201ENST00000297071 TNFRSF18Q9Y5U5 241 aa14.02□□□□□ -0.16
TRA2A-201ENST00000297071 IGLV5-45A0A087WSX0 123 aa14.01□□□□□ -0.17
TRA2A-201ENST00000297071 H7C423 109 aa14.01□□□□□ -0.17
TRA2A-201ENST00000297071 TMEM61Q8N0U2 210 aa14.01□□□□□ -0.17
TRA2A-201ENST00000297071 CHCHD7Q9BUK0 85 aa14.01□□□□□ -0.17
TRA2A-201ENST00000297071 PPDPFQ9H3Y8 114 aa14.01□□□□□ -0.17
TRA2A-201ENST00000297071 UBE2D4Q9Y2X8 147 aa14.01□□□□□ -0.17
TRA2A-201ENST00000297071 CSMD1Q96PZ7 3565 aa14□□□□□ -0.17
TRA2A-201ENST00000297071 SPTA1P02549 2419 aa14□□□□□ -0.17
TRA2A-201ENST00000297071 PRORYQ9H606 182 aa14□□□□□ -0.17
TRA2A-201ENST00000297071 TEP1Q99973 2627 aaKnown RBP13.99□□□□□ -0.17
TRA2A-201ENST00000297071 TRAV4A0A0B4J268 109 aa13.99□□□□□ -0.17
TRA2A-201ENST00000297071 ADAMTSL4-AS1Q5T5F5 129 aa13.99□□□□□ -0.17
TRA2A-201ENST00000297071 TEX49A0A1B0GTD5 131 aa13.99□□□□□ -0.17
TRA2A-201ENST00000297071 NDUFA1O15239 70 aa13.99□□□□□ -0.17
TRA2A-201ENST00000297071 TTC32Q5I0X7 151 aa13.99□□□□□ -0.17
TRA2A-201ENST00000297071 TRAV8-3A0A0A6YYJ7 113 aa13.98□□□□□ -0.17
TRA2A-201ENST00000297071 C19orf84I3L1E1 186 aa13.98□□□□□ -0.17
TRA2A-201ENST00000297071 IGKV3-20P01619 116 aa13.98□□□□□ -0.17
TRA2A-201ENST00000297071 PRSS2P07478 247 aa13.98□□□□□ -0.17
TRA2A-201ENST00000297071 ZNF415Q09FC8 603 aa13.98□□□□□ -0.17
TRA2A-201ENST00000297071 COPS9Q8WXC6 57 aa13.98□□□□□ -0.17
TRA2A-201ENST00000297071 FAM19A3Q7Z5A8 133 aa13.97□□□□□ -0.17
TRA2A-201ENST00000297071 C15orf53Q8NAA6 179 aa13.97□□□□□ -0.17
TRA2A-201ENST00000297071 ANKRD17O75179 2603 aaKnown RBP13.97□□□□□ -0.17
TRA2A-201ENST00000297071 COL6A6A6NMZ7 2263 aa13.97□□□□□ -0.17
TRA2A-201ENST00000297071 HIVEP3Q5T1R4 2406 aa13.97□□□□□ -0.17
TRA2A-201ENST00000297071 GAGE12JA6NER3 117 aa13.96□□□□□ -0.17
TRA2A-201ENST00000297071 B4DSR2 109 aa13.96□□□□□ -0.17
TRA2A-201ENST00000297071 CRLF1O75462 422 aa13.96□□□□□ -0.17
TRA2A-201ENST00000297071 GAGE7O76087 117 aa13.96□□□□□ -0.17
TRA2A-201ENST00000297071 GAGE12FP0CL80 117 aa13.96□□□□□ -0.17
TRA2A-201ENST00000297071 GAGE12GP0CL81 117 aa13.96□□□□□ -0.17
TRA2A-201ENST00000297071 GAGE12IP0CL82 117 aa13.96□□□□□ -0.17
TRA2A-201ENST00000297071 GAGE4Q13068 117 aa13.96□□□□□ -0.17
TRA2A-201ENST00000297071 CCL19Q99731 98 aa13.96□□□□□ -0.17
TRA2A-201ENST00000297071 IGHV3-53P01767 116 aa13.95□□□□□ -0.18
TRA2A-201ENST00000297071 ACYP1P07311 99 aa13.95□□□□□ -0.18
TRA2A-201ENST00000297071 RBMY1A1P0DJD3 496 aaKnown RBP13.95□□□□□ -0.18
TRA2A-201ENST00000297071 RBMY1CP0DJD4 496 aa13.95□□□□□ -0.18
TRA2A-201ENST00000297071 RBMY1FQ15415 496 aaKnown RBP13.95□□□□□ -0.18
TRA2A-201ENST00000297071 BEX4Q9NWD9 120 aaPredicted RBP13.95□□□□□ -0.18
TRA2A-201ENST00000297071 CIRBPQ14011 172 aaKnown RBP13.94□□□□□ -0.18
TRA2A-201ENST00000297071 BEAN1Q3B7T3 259 aa13.94□□□□□ -0.18
TRA2A-201ENST00000297071 DOPEY2Q9Y3R5 2298 aa13.94□□□□□ -0.18
TRA2A-201ENST00000297071 UBE2E2Q96LR5 201 aa13.94□□□□□ -0.18
TRA2A-201ENST00000297071 TRBV7-7A0A0K0K1E9 115 aa13.93□□□□□ -0.18
TRA2A-201ENST00000297071 ADARB2-AS1A8MUL3 147 aa13.93□□□□□ -0.18
TRA2A-201ENST00000297071 DSCR9P59020 149 aa13.93□□□□□ -0.18
TRA2A-201ENST00000297071 IGHV4-30-2A0A087WSY4 118 aa13.92□□□□□ -0.18
TRA2A-201ENST00000297071 SYNJ2BPP57105 145 aa13.92□□□□□ -0.18
TRA2A-201ENST00000297071 IGLV5-39A0A0G2JS06 123 aa13.92□□□□□ -0.18
TRA2A-201ENST00000297071 TMEM95Q3KNT9 176 aa13.92□□□□□ -0.18
TRA2A-201ENST00000297071 IMUPQ9GZP8 106 aa13.91□□□□□ -0.18
TRA2A-201ENST00000297071 RS1O15537 224 aa13.9□□□□□ -0.18
TRA2A-201ENST00000297071 CFAP46Q8IYW2 2715 aa13.9□□□□□ -0.18
TRA2A-201ENST00000297071 MYO9AB2RTY4 2548 aa13.9□□□□□ -0.18
TRA2A-201ENST00000297071 TEX15Q9BXT5 2789 aa13.9□□□□□ -0.18
TRA2A-201ENST00000297071 J3QLI3 93 aa13.9□□□□□ -0.18
TRA2A-201ENST00000297071 AVPP01185 164 aa13.9□□□□□ -0.18
TRA2A-201ENST00000297071 HOXD3P31249 432 aaPredicted RBP13.9□□□□□ -0.18
TRA2A-201ENST00000297071 PROK1P58294 105 aa13.9□□□□□ -0.18
TRA2A-201ENST00000297071 HERVK_113P63121 156 aa13.9□□□□□ -0.18
TRA2A-201ENST00000297071 PTPN13Q12923 2485 aa13.9□□□□□ -0.18
TRA2A-201ENST00000297071 CEMP1Q6PRD7 247 aaPredicted RBP13.9□□□□□ -0.18
TRA2A-201ENST00000297071 DUX3Q96PT4 197 aa13.9□□□□□ -0.18
TRA2A-201ENST00000297071 ATP5J2P56134 94 aa13.89□□□□□ -0.19
TRA2A-201ENST00000297071 TMEM101Q96IK0 257 aa13.89□□□□□ -0.19
TRA2A-201ENST00000297071 B5MCH6 92 aa13.88□□□□□ -0.19
TRA2A-201ENST00000297071 IGHV4-59P01825 116 aa13.88□□□□□ -0.19
TRA2A-201ENST00000297071 CSDC2Q9Y534 153 aaKnown RBP13.88□□□□□ -0.19
TRA2A-201ENST00000297071 COX7A2LO14548 114 aa13.87□□□□□ -0.19
TRA2A-201ENST00000297071 DEFB112Q30KQ8 113 aa13.87□□□□□ -0.19
TRA2A-201ENST00000297071 C11orf72Q8NBR9 251 aa13.87□□□□□ -0.19
TRA2A-201ENST00000297071 CLEC2BQ92478 149 aa13.87□□□□□ -0.19
TRA2A-201ENST00000297071 CITED2Q99967 270 aaPredicted RBP13.87□□□□□ -0.19
TRA2A-201ENST00000297071 CDKN2A-AS1Q9UH64 79 aa13.87□□□□□ -0.19
TRA2A-201ENST00000297071 LINC00308Q8TCZ7 52 aa13.87□□□□□ -0.19
TRA2A-201ENST00000297071 SHISA2Q6UWI4 295 aa13.86□□□□□ -0.19
TRA2A-201ENST00000297071 C10orf99Q6UWK7 81 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms