RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 HIST2H2BDQ6DRA6 164 aa10.21□□□□□ -0.77
HPS3-201ENST00000296051 LINC00574Q9H8X3 128 aa10.21□□□□□ -0.77
HPS3-201ENST00000296051 TCL1BO95988 128 aa10.21□□□□□ -0.77
HPS3-201ENST00000296051 TRBV12-3P01733 135 aa10.21□□□□□ -0.77
HPS3-201ENST00000296051 MRPL53Q96EL3 112 aaKnown RBP10.21□□□□□ -0.77
HPS3-201ENST00000296051 A6NDX4 124 aa10.2□□□□□ -0.78
HPS3-201ENST00000296051 GHRHP01286 108 aa10.2□□□□□ -0.78
HPS3-201ENST00000296051 RHOHQ15669 191 aa10.2□□□□□ -0.78
HPS3-201ENST00000296051 CRLF1O75462 422 aa10.2□□□□□ -0.78
HPS3-201ENST00000296051 TM2D2Q9BX73 214 aa10.2□□□□□ -0.78
HPS3-201ENST00000296051 LINC01620Q4KN68 170 aa10.19□□□□□ -0.78
HPS3-201ENST00000296051 CEMP1Q6PRD7 247 aaPredicted RBP10.19□□□□□ -0.78
HPS3-201ENST00000296051 RNF185Q96GF1 192 aa10.19□□□□□ -0.78
HPS3-201ENST00000296051 CLUHP3Q96NS8 147 aa10.19□□□□□ -0.78
HPS3-201ENST00000296051 LEPROTO15243 131 aa10.19□□□□□ -0.78
HPS3-201ENST00000296051 TOMM6Q96B49 74 aa10.19□□□□□ -0.78
HPS3-201ENST00000296051 TRANK1O15050 2925 aa10.18□□□□□ -0.78
HPS3-201ENST00000296051 TRBV6-1A0A0K0K1D8 114 aa10.18□□□□□ -0.78
HPS3-201ENST00000296051 Q6ZUT4 128 aa10.18□□□□□ -0.78
HPS3-201ENST00000296051 CLEC2BQ92478 149 aa10.18□□□□□ -0.78
HPS3-201ENST00000296051 SHISA2Q6UWI4 295 aa10.18□□□□□ -0.78
HPS3-201ENST00000296051 NDUFA11Q86Y39 141 aa10.18□□□□□ -0.78
HPS3-201ENST00000296051 GYPEP15421 78 aa10.18□□□□□ -0.78
HPS3-201ENST00000296051 FRYQ5TBA9 3013 aa10.18□□□□□ -0.78
HPS3-201ENST00000296051 C1orf43Q9BWL3 253 aa10.17□□□□□ -0.78
HPS3-201ENST00000296051 TRAV12-1A0A0B4J245 112 aa10.17□□□□□ -0.78
HPS3-201ENST00000296051 F8W735 103 aaPredicted RBP10.17□□□□□ -0.78
HPS3-201ENST00000296051 Q9H8V8 135 aa10.17□□□□□ -0.78
HPS3-201ENST00000296051 TINCRA0A1B0GVN0 87 aa10.17□□□□□ -0.78
HPS3-201ENST00000296051 MDFICQ9P1T7 246 aa10.17□□□□□ -0.78
HPS3-201ENST00000296051 TNRC6BQ9UPQ9 1833 aaKnown RBP10.17□□□□□ -0.78
HPS3-201ENST00000296051 MRPL23Q16540 153 aaKnown RBP10.16□□□□□ -0.78
HPS3-201ENST00000296051 C11orf21Q9P2W6 132 aa10.16□□□□□ -0.78
HPS3-201ENST00000296051 XCL1P47992 114 aa10.16□□□□□ -0.78
HPS3-201ENST00000296051 Q6YL49 198 aa10.16□□□□□ -0.78
HPS3-201ENST00000296051 Q6ZSV7 163 aa10.16□□□□□ -0.78
HPS3-201ENST00000296051 NKAPP1Q8N9T2 125 aa10.16□□□□□ -0.78
HPS3-201ENST00000296051 IGLV10-54A0A075B6I4 117 aa10.16□□□□□ -0.78
HPS3-201ENST00000296051 IGHV3-30P01768 117 aa10.16□□□□□ -0.78
HPS3-201ENST00000296051 IGHV3-33P01772 117 aa10.16□□□□□ -0.78
HPS3-201ENST00000296051 IGHV3-30-3P0DP02 117 aa10.16□□□□□ -0.78
HPS3-201ENST00000296051 IGHV3-30-5P0DP03 117 aa10.16□□□□□ -0.78
HPS3-201ENST00000296051 C9orf47Q6ZRZ4 202 aa10.16□□□□□ -0.78
HPS3-201ENST00000296051 GPHB5Q86YW7 130 aa10.16□□□□□ -0.78
HPS3-201ENST00000296051 Q8N1Y9 231 aa10.16□□□□□ -0.78
HPS3-201ENST00000296051 C16orf54Q6UWD8 224 aa10.15□□□□□ -0.78
HPS3-201ENST00000296051 C4orf3Q8WVX3 66 aa10.15□□□□□ -0.78
HPS3-201ENST00000296051 LENEPQ9Y5L5 61 aa10.15□□□□□ -0.78
HPS3-201ENST00000296051 BBC3Q96PG8 261 aaPredicted RBP10.15□□□□□ -0.78
HPS3-201ENST00000296051 KLK5Q9Y337 293 aaPredicted RBP10.15□□□□□ -0.78
HPS3-201ENST00000296051 A0A096LNJ9 63 aa10.15□□□□□ -0.79
HPS3-201ENST00000296051 CRYGBP07316 175 aa10.15□□□□□ -0.79
HPS3-201ENST00000296051 UFSP1Q6NVU6 142 aa10.15□□□□□ -0.79
HPS3-201ENST00000296051 CCDC140Q96MF4 163 aa10.15□□□□□ -0.79
HPS3-201ENST00000296051 TEX49A0A1B0GTD5 131 aa10.14□□□□□ -0.79
HPS3-201ENST00000296051 F8WEM9 126 aa10.14□□□□□ -0.79
HPS3-201ENST00000296051 UBE2BP63146 152 aa10.14□□□□□ -0.79
HPS3-201ENST00000296051 CITED1Q99966 193 aa10.14□□□□□ -0.79
HPS3-201ENST00000296051 PRB2P02812 416 aaPredicted RBP10.13□□□□□ -0.79
HPS3-201ENST00000296051 P0DMU3 169 aa10.13□□□□□ -0.79
HPS3-201ENST00000296051 FAM231AP0DMU4 169 aa10.13□□□□□ -0.79
HPS3-201ENST00000296051 FAM231CP0DMU5 169 aa10.13□□□□□ -0.79
HPS3-201ENST00000296051 HHLA3Q9XRX5 114 aa10.13□□□□□ -0.79
HPS3-201ENST00000296051 EXPH5Q8NEV8 1989 aa10.13□□□□□ -0.79
HPS3-201ENST00000296051 C10orf99Q6UWK7 81 aa10.13□□□□□ -0.79
HPS3-201ENST00000296051 ICOSQ9Y6W8 199 aa10.13□□□□□ -0.79
HPS3-201ENST00000296051 ATP6V0E2Q8NHE4 81 aa10.12□□□□□ -0.79
HPS3-201ENST00000296051 U3KQK5 164 aa10.12□□□□□ -0.79
HPS3-201ENST00000296051 FAM236AA0A1B0GUQ0 79 aa10.12□□□□□ -0.79
HPS3-201ENST00000296051 FAM236BA0A1B0GV22 79 aa10.12□□□□□ -0.79
HPS3-201ENST00000296051 BAALC-AS2P0C853 105 aa10.12□□□□□ -0.79
HPS3-201ENST00000296051 K7EMT4 169 aa10.12□□□□□ -0.79
HPS3-201ENST00000296051 NEXN-AS1Q8NBZ9 246 aa10.12□□□□□ -0.79
HPS3-201ENST00000296051 C16orf74Q96GX8 76 aa10.12□□□□□ -0.79
HPS3-201ENST00000296051 NBEAQ8NFP9 2946 aa10.11□□□□□ -0.79
HPS3-201ENST00000296051 C11orf71Q6IPW1 123 aa10.11□□□□□ -0.79
HPS3-201ENST00000296051 CENPEQ02224 2701 aa10.11□□□□□ -0.79
HPS3-201ENST00000296051 IGHG4P01861 327 aa10.11□□□□□ -0.79
HPS3-201ENST00000296051 TRAV25A0A0B4J276 109 aa10.11□□□□□ -0.79
HPS3-201ENST00000296051 C5orf38Q86SI9 138 aa10.11□□□□□ -0.79
HPS3-201ENST00000296051 PTPRBP23467 1997 aa10.11□□□□□ -0.79
HPS3-201ENST00000296051 SETXQ7Z333 2677 aaKnown RBP10.1□□□□□ -0.79
HPS3-201ENST00000296051 ANKRD17O75179 2603 aaKnown RBP10.1□□□□□ -0.79
HPS3-201ENST00000296051 TMEM89A2RUT3 159 aa10.1□□□□□ -0.79
HPS3-201ENST00000296051 CDK2AP2O75956 126 aa10.1□□□□□ -0.79
HPS3-201ENST00000296051 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.1□□□□□ -0.79
HPS3-201ENST00000296051 LINC00482Q8N8I6 264 aa10.1□□□□□ -0.79
HPS3-201ENST00000296051 C20orf173Q96LM9 149 aa10.1□□□□□ -0.79
HPS3-201ENST00000296051 FAM110AQ9BQ89 295 aa10.1□□□□□ -0.79
HPS3-201ENST00000296051 XGP55808 180 aa10.1□□□□□ -0.79
HPS3-201ENST00000296051 Q6ZS46 218 aa10.09□□□□□ -0.79
HPS3-201ENST00000296051 LINC01006Q8NI28 216 aa10.09□□□□□ -0.79
HPS3-201ENST00000296051 INAFM2P0DMQ5 153 aa10.09□□□□□ -0.79
HPS3-201ENST00000296051 C11orf45Q8TAV5 145 aa10.09□□□□□ -0.79
HPS3-201ENST00000296051 TMEM126AQ9H061 195 aa10.09□□□□□ -0.79
HPS3-201ENST00000296051 PRR9Q5T870 116 aa10.09□□□□□ -0.79
HPS3-201ENST00000296051 IGKV3D-7A0A0C4DH55 119 aa10.09□□□□□ -0.79
HPS3-201ENST00000296051 NRACQ8N912 160 aa10.09□□□□□ -0.79
HPS3-201ENST00000296051 TIMM17AQ99595 171 aa10.08□□□□□ -0.8
HPS3-201ENST00000296051 A8MZ25 164 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms