RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 CITED2Q99967 270 aaPredicted RBP11.52□□□□□ -0.56
NCKIPSD-201ENST00000294129 UNC79Q9P2D8 2635 aa11.52□□□□□ -0.56
NCKIPSD-201ENST00000294129 HIVEP2P31629 2446 aa11.52□□□□□ -0.56
NCKIPSD-201ENST00000294129 AZU1P20160 251 aa11.52□□□□□ -0.57
NCKIPSD-201ENST00000294129 SMAGPQ0VAQ4 97 aa11.52□□□□□ -0.57
NCKIPSD-201ENST00000294129 RHOHQ15669 191 aa11.52□□□□□ -0.57
NCKIPSD-201ENST00000294129 TAL2Q16559 108 aa11.52□□□□□ -0.57
NCKIPSD-201ENST00000294129 NSUN5P1Q3KNT7 163 aa11.52□□□□□ -0.57
NCKIPSD-201ENST00000294129 VCX2Q9H322 139 aa11.52□□□□□ -0.57
NCKIPSD-201ENST00000294129 SPANXB1Q9NS25 103 aaPredicted RBP11.52□□□□□ -0.57
NCKIPSD-201ENST00000294129 TSSC4Q9Y5U2 329 aaPredicted RBP11.52□□□□□ -0.57
NCKIPSD-201ENST00000294129 PDZD2O15018 2839 aa11.52□□□□□ -0.57
NCKIPSD-201ENST00000294129 F8W1H4 67 aa11.52□□□□□ -0.57
NCKIPSD-201ENST00000294129 CCL24O00175 119 aa11.52□□□□□ -0.57
NCKIPSD-201ENST00000294129 ODF3L2Q3SX64 289 aa11.51□□□□□ -0.57
NCKIPSD-201ENST00000294129 PAPPA-AS1Q5QFB9 102 aa11.51□□□□□ -0.57
NCKIPSD-201ENST00000294129 STHQ8IWL8 128 aa11.51□□□□□ -0.57
NCKIPSD-201ENST00000294129 INSP01308 110 aa11.51□□□□□ -0.57
NCKIPSD-201ENST00000294129 IGLV4-3A0A075B6K6 122 aa11.5□□□□□ -0.57
NCKIPSD-201ENST00000294129 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.5□□□□□ -0.57
NCKIPSD-201ENST00000294129 IGKV2-29A2NJV5 120 aaPredicted RBP11.5□□□□□ -0.57
NCKIPSD-201ENST00000294129 LGALS3P17931 250 aaKnown RBP11.5□□□□□ -0.57
NCKIPSD-201ENST00000294129 RRN3P1Q2M238 152 aa11.5□□□□□ -0.57
NCKIPSD-201ENST00000294129 IGHV3-53P01767 116 aa11.49□□□□□ -0.57
NCKIPSD-201ENST00000294129 CFAP126Q5VTH2 177 aa11.49□□□□□ -0.57
NCKIPSD-201ENST00000294129 LINC01549A6NIU2 74 aa11.49□□□□□ -0.57
NCKIPSD-201ENST00000294129 A8MWV9 139 aa11.49□□□□□ -0.57
NCKIPSD-201ENST00000294129 J3QQQ9 107 aa11.49□□□□□ -0.57
NCKIPSD-201ENST00000294129 GAGE13Q4V321 117 aa11.49□□□□□ -0.57
NCKIPSD-201ENST00000294129 PGPEP1Q9NXJ5 209 aa11.49□□□□□ -0.57
NCKIPSD-201ENST00000294129 ADARB2-AS1A8MUL3 147 aa11.49□□□□□ -0.57
NCKIPSD-201ENST00000294129 INSL3P51460 131 aa11.49□□□□□ -0.57
NCKIPSD-201ENST00000294129 SIGMAR1Q99720 223 aa11.49□□□□□ -0.57
NCKIPSD-201ENST00000294129 SPXQ9BT56 116 aa11.49□□□□□ -0.57
NCKIPSD-201ENST00000294129 WFDC10AQ9H1F0 79 aa11.49□□□□□ -0.57
NCKIPSD-201ENST00000294129 GAGE12HA6NDE8 117 aa11.48□□□□□ -0.57
NCKIPSD-201ENST00000294129 A0A0J9YY99 117 aa11.48□□□□□ -0.57
NCKIPSD-201ENST00000294129 TRGV1A0A0A0MS02 117 aa11.47□□□□□ -0.57
NCKIPSD-201ENST00000294129 C11orf72Q8NBR9 251 aa11.47□□□□□ -0.57
NCKIPSD-201ENST00000294129 ZNF22P17026 224 aaPredicted RBP11.46□□□□□ -0.57
NCKIPSD-201ENST00000294129 LOC107984156A0A0G2JMH3 177 aa11.46□□□□□ -0.57
NCKIPSD-201ENST00000294129 J3QR89 54 aa11.46□□□□□ -0.57
NCKIPSD-201ENST00000294129 ARL17AQ8IVW1 177 aa11.46□□□□□ -0.57
NCKIPSD-201ENST00000294129 A8MTW9 85 aa11.46□□□□□ -0.58
NCKIPSD-201ENST00000294129 TMEM86BQ8N661 226 aa11.46□□□□□ -0.58
NCKIPSD-201ENST00000294129 TRAV8-3A0A0A6YYJ7 113 aa11.45□□□□□ -0.58
NCKIPSD-201ENST00000294129 TRAV2A0A0B4J234 112 aa11.45□□□□□ -0.58
NCKIPSD-201ENST00000294129 A0A1B0GWB2 263 aa11.45□□□□□ -0.58
NCKIPSD-201ENST00000294129 RHODO00212 210 aa11.45□□□□□ -0.58
NCKIPSD-201ENST00000294129 PRO0461Q9UI25 63 aa11.45□□□□□ -0.58
NCKIPSD-201ENST00000294129 TMEM238LA0A1B0GVL6 79 aa11.44□□□□□ -0.58
NCKIPSD-201ENST00000294129 A6NJY4 79 aa11.44□□□□□ -0.58
NCKIPSD-201ENST00000294129 RPL35AP18077 110 aaKnown RBP11.44□□□□□ -0.58
NCKIPSD-201ENST00000294129 LINC01006Q8NI28 216 aa11.44□□□□□ -0.58
NCKIPSD-201ENST00000294129 TMEM223A0PJW6 202 aa11.44□□□□□ -0.58
NCKIPSD-201ENST00000294129 C1orf158Q8N1D5 194 aa11.44□□□□□ -0.58
NCKIPSD-201ENST00000294129 SMR3AQ99954 134 aa11.44□□□□□ -0.58
NCKIPSD-201ENST00000294129 LINC00467Q9BRT7 94 aa11.44□□□□□ -0.58
NCKIPSD-201ENST00000294129 NFE4Q86UQ8 179 aa11.43□□□□□ -0.58
NCKIPSD-201ENST00000294129 A8MZ25 164 aa11.43□□□□□ -0.58
NCKIPSD-201ENST00000294129 GCN1Q92616 2671 aaKnown RBP11.43□□□□□ -0.58
NCKIPSD-201ENST00000294129 H7C2G1 150 aa11.42□□□□□ -0.58
NCKIPSD-201ENST00000294129 Q6ZUT4 128 aa11.42□□□□□ -0.58
NCKIPSD-201ENST00000294129 AMELXQ99217 191 aa11.42□□□□□ -0.58
NCKIPSD-201ENST00000294129 NBEAL2Q6ZNJ1 2754 aa11.42□□□□□ -0.58
NCKIPSD-201ENST00000294129 KRTAP1-1Q07627 177 aa11.42□□□□□ -0.58
NCKIPSD-201ENST00000294129 Q6ZTI0 123 aa11.42□□□□□ -0.58
NCKIPSD-201ENST00000294129 FAM104AQ969W3 186 aa11.42□□□□□ -0.58
NCKIPSD-201ENST00000294129 FHL3Q13643 280 aa11.41□□□□□ -0.58
NCKIPSD-201ENST00000294129 CHCHD7Q9BUK0 85 aa11.41□□□□□ -0.58
NCKIPSD-201ENST00000294129 LEPROTO15243 131 aa11.4□□□□□ -0.58
NCKIPSD-201ENST00000294129 TSPAN13O95857 204 aa11.4□□□□□ -0.58
NCKIPSD-201ENST00000294129 PSMB2P49721 201 aa11.4□□□□□ -0.58
NCKIPSD-201ENST00000294129 SLC25A29Q8N8R3 303 aa11.4□□□□□ -0.58
NCKIPSD-201ENST00000294129 TIMM21Q9BVV7 248 aa11.4□□□□□ -0.58
NCKIPSD-201ENST00000294129 IGHV3-30P01768 117 aa11.4□□□□□ -0.58
NCKIPSD-201ENST00000294129 SPINK8P0C7L1 97 aa11.4□□□□□ -0.58
NCKIPSD-201ENST00000294129 IGHV3-30-5P0DP03 117 aa11.4□□□□□ -0.58
NCKIPSD-201ENST00000294129 TEX29Q8N6K0 151 aa11.4□□□□□ -0.58
NCKIPSD-201ENST00000294129 DGAT2L7PQ6IED9 249 aa11.4□□□□□ -0.59
NCKIPSD-201ENST00000294129 ZNF418Q8TF45 676 aaPredicted RBP11.4□□□□□ -0.59
NCKIPSD-201ENST00000294129 NOP10Q9NPE3 64 aaKnown RBP11.4□□□□□ -0.59
NCKIPSD-201ENST00000294129 ANK3Q12955 4377 aaKnown RBP11.39□□□□□ -0.59
NCKIPSD-201ENST00000294129 IGHV3-30-3P0DP02 117 aa11.39□□□□□ -0.59
NCKIPSD-201ENST00000294129 UBE2D1P51668 147 aa11.39□□□□□ -0.59
NCKIPSD-201ENST00000294129 NPC2P61916 151 aa11.39□□□□□ -0.59
NCKIPSD-201ENST00000294129 SPATA25Q9BR10 227 aa11.39□□□□□ -0.59
NCKIPSD-201ENST00000294129 UBE2D4Q9Y2X8 147 aa11.39□□□□□ -0.59
NCKIPSD-201ENST00000294129 CFC1BP0CG36 223 aa11.38□□□□□ -0.59
NCKIPSD-201ENST00000294129 CFC1P0CG37 223 aa11.38□□□□□ -0.59
NCKIPSD-201ENST00000294129 PLA2G2AP14555 144 aa11.38□□□□□ -0.59
NCKIPSD-201ENST00000294129 NDUFA11Q86Y39 141 aa11.38□□□□□ -0.59
NCKIPSD-201ENST00000294129 C10orf126Q8N4M7 172 aa11.38□□□□□ -0.59
NCKIPSD-201ENST00000294129 RS1O15537 224 aa11.38□□□□□ -0.59
NCKIPSD-201ENST00000294129 SMCPP49901 116 aaPredicted RBP11.38□□□□□ -0.59
NCKIPSD-201ENST00000294129 PTH2Q96A98 100 aa11.38□□□□□ -0.59
NCKIPSD-201ENST00000294129 A4D1N5 150 aa11.37□□□□□ -0.59
NCKIPSD-201ENST00000294129 CIDEAO60543 219 aa11.37□□□□□ -0.59
NCKIPSD-201ENST00000294129 PRSS2P07478 247 aa11.37□□□□□ -0.59
NCKIPSD-201ENST00000294129 TRAV25A0A0B4J276 109 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms