RNA–Protein interactions for RNA: ENST00000291906.4

PKN3-201, Transcript of protein kinase N3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKN3, Length 3,375 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN3-201ENST00000291906 ZNRF2Q8NHG8 242 aa12.2□□□□□ -0.46
PKN3-201ENST00000291906 NHP2Q9NX24 153 aaKnown RBP12.2□□□□□ -0.46
PKN3-201ENST00000291906 GAGE12BA1L429 117 aa12.19□□□□□ -0.46
PKN3-201ENST00000291906 GAGE7O76087 117 aa12.19□□□□□ -0.46
PKN3-201ENST00000291906 GAGE12FP0CL80 117 aa12.19□□□□□ -0.46
PKN3-201ENST00000291906 GAGE12GP0CL81 117 aa12.19□□□□□ -0.46
PKN3-201ENST00000291906 GAGE12IP0CL82 117 aa12.19□□□□□ -0.46
PKN3-201ENST00000291906 SPXQ9BT56 116 aa12.19□□□□□ -0.46
PKN3-201ENST00000291906 SEC11AP67812 179 aa12.19□□□□□ -0.46
PKN3-201ENST00000291906 TMEM141Q96I45 108 aa12.19□□□□□ -0.46
PKN3-201ENST00000291906 TRGV2A0A075B6R0 118 aa12.18□□□□□ -0.46
PKN3-201ENST00000291906 SIVA1O15304 175 aa12.18□□□□□ -0.46
PKN3-201ENST00000291906 A0A0J9YXV3 536 aa12.18□□□□□ -0.46
PKN3-201ENST00000291906 RHOHQ15669 191 aa12.18□□□□□ -0.46
PKN3-201ENST00000291906 IGLV4-69A0A075B6H9 119 aa12.18□□□□□ -0.46
PKN3-201ENST00000291906 SPATA3Q8NHX4 192 aa12.18□□□□□ -0.46
PKN3-201ENST00000291906 TIMM17AQ99595 171 aa12.18□□□□□ -0.46
PKN3-201ENST00000291906 NDUFA7O95182 113 aa12.17□□□□□ -0.46
PKN3-201ENST00000291906 HERVK_113P61574 105 aa12.17□□□□□ -0.46
PKN3-201ENST00000291906 MYMXA0A1B0GTQ4 84 aa12.16□□□□□ -0.46
PKN3-201ENST00000291906 UBE2V1Q13404 147 aa12.16□□□□□ -0.46
PKN3-201ENST00000291906 COTL1Q14019 142 aa12.16□□□□□ -0.46
PKN3-201ENST00000291906 RHODO00212 210 aa12.16□□□□□ -0.46
PKN3-201ENST00000291906 RRN3P1Q2M238 152 aa12.16□□□□□ -0.46
PKN3-201ENST00000291906 GAGE12JA6NER3 117 aa12.15□□□□□ -0.46
PKN3-201ENST00000291906 GAGE1Q13065 139 aa12.15□□□□□ -0.46
PKN3-201ENST00000291906 GAGE4Q13068 117 aa12.15□□□□□ -0.46
PKN3-201ENST00000291906 GAGE5Q13069 117 aa12.15□□□□□ -0.46
PKN3-201ENST00000291906 SRSF9Q13242 221 aaKnown RBP eCLIP12.15□□□□□ -0.46
PKN3-201ENST00000291906 GAGE13Q4V321 117 aa12.15□□□□□ -0.46
PKN3-201ENST00000291906 DGAT2L7PQ6IED9 249 aa12.15□□□□□ -0.46
PKN3-201ENST00000291906 PLEKHB2Q96CS7 222 aa12.15□□□□□ -0.46
PKN3-201ENST00000291906 IGLV4-3A0A075B6K6 122 aa12.15□□□□□ -0.47
PKN3-201ENST00000291906 E9PLD3 99 aa12.14□□□□□ -0.47
PKN3-201ENST00000291906 GIG44P09565 113 aaPredicted RBP12.14□□□□□ -0.47
PKN3-201ENST00000291906 RNASE8Q8TDE3 154 aaKnown RBP12.14□□□□□ -0.47
PKN3-201ENST00000291906 RS1O15537 224 aa12.13□□□□□ -0.47
PKN3-201ENST00000291906 SMIM13P0DJ93 91 aa12.13□□□□□ -0.47
PKN3-201ENST00000291906 NDUFA11Q86Y39 141 aa12.13□□□□□ -0.47
PKN3-201ENST00000291906 TMEM263Q8WUH6 116 aaKnown RBP12.13□□□□□ -0.47
PKN3-201ENST00000291906 UFSP1Q6NVU6 142 aa12.13□□□□□ -0.47
PKN3-201ENST00000291906 LINC00482Q8N8I6 264 aa12.13□□□□□ -0.47
PKN3-201ENST00000291906 LINC00467Q9BRT7 94 aa12.13□□□□□ -0.47
PKN3-201ENST00000291906 CEND1Q8N111 149 aa12.13□□□□□ -0.47
PKN3-201ENST00000291906 DEFB130BP0DP73 79 aa12.12□□□□□ -0.47
PKN3-201ENST00000291906 DEFB130AP0DP74 79 aa12.12□□□□□ -0.47
PKN3-201ENST00000291906 C19orf73Q9NVV2 129 aa12.12□□□□□ -0.47
PKN3-201ENST00000291906 LINC01549A6NIU2 74 aa12.12□□□□□ -0.47
PKN3-201ENST00000291906 PAPPA-AS1Q5QFB9 102 aa12.12□□□□□ -0.47
PKN3-201ENST00000291906 HIGD1BQ9P298 99 aa12.12□□□□□ -0.47
PKN3-201ENST00000291906 CMC4P56277 68 aaPredicted RBP12.12□□□□□ -0.47
PKN3-201ENST00000291906 BEAN1Q3B7T3 259 aa12.12□□□□□ -0.47
PKN3-201ENST00000291906 GAGE10A6NGK3 116 aa12.11□□□□□ -0.47
PKN3-201ENST00000291906 LGALS3P17931 250 aaKnown RBP12.11□□□□□ -0.47
PKN3-201ENST00000291906 TSPEAR-AS2P59090 65 aa12.11□□□□□ -0.47
PKN3-201ENST00000291906 H3BRM9 83 aa12.1□□□□□ -0.47
PKN3-201ENST00000291906 LOC100131303A0A0U1RQF7 123 aa12.1□□□□□ -0.47
PKN3-201ENST00000291906 TRGV4A0A0C4DH28 118 aa12.1□□□□□ -0.47
PKN3-201ENST00000291906 RPL36AP83881 106 aaKnown RBP12.1□□□□□ -0.47
PKN3-201ENST00000291906 SFTA2Q6UW10 78 aa12.1□□□□□ -0.47
PKN3-201ENST00000291906 Q6ZUT4 128 aa12.1□□□□□ -0.47
PKN3-201ENST00000291906 SLC25A29Q8N8R3 303 aa12.1□□□□□ -0.47
PKN3-201ENST00000291906 RPL36ALQ969Q0 106 aaKnown RBP12.1□□□□□ -0.47
PKN3-201ENST00000291906 C9orf118A6NHY6 69 aa12.09□□□□□ -0.47
PKN3-201ENST00000291906 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.09□□□□□ -0.47
PKN3-201ENST00000291906 C1QTNF4Q9BXJ3 329 aa12.09□□□□□ -0.47
PKN3-201ENST00000291906 CHCHD7Q9BUK0 85 aa12.09□□□□□ -0.47
PKN3-201ENST00000291906 CRLF1O75462 422 aa12.09□□□□□ -0.47
PKN3-201ENST00000291906 CLUHP3Q96NS8 147 aa12.09□□□□□ -0.47
PKN3-201ENST00000291906 TRAV8-3A0A0A6YYJ7 113 aa12.08□□□□□ -0.48
PKN3-201ENST00000291906 TRBV7-3A0A075B6L6 115 aa12.08□□□□□ -0.48
PKN3-201ENST00000291906 J3QQQ9 107 aa12.08□□□□□ -0.48
PKN3-201ENST00000291906 DEFB4AO15263 64 aa12.08□□□□□ -0.48
PKN3-201ENST00000291906 K7EQD1 137 aa12.07□□□□□ -0.48
PKN3-201ENST00000291906 ZNF22P17026 224 aaPredicted RBP12.07□□□□□ -0.48
PKN3-201ENST00000291906 IGKV3OR2-268A0A0C4DH90 116 aa12.07□□□□□ -0.48
PKN3-201ENST00000291906 APOMO95445 188 aa12.07□□□□□ -0.48
PKN3-201ENST00000291906 A8MZ25 164 aa12.06□□□□□ -0.48
PKN3-201ENST00000291906 SAMD5Q5TGI4 173 aa12.06□□□□□ -0.48
PKN3-201ENST00000291906 C16orf74Q96GX8 76 aa12.06□□□□□ -0.48
PKN3-201ENST00000291906 GEMIN7Q9H840 131 aaKnown RBP12.06□□□□□ -0.48
PKN3-201ENST00000291906 PIK3CD-AS1Q5SR53 167 aa12.05□□□□□ -0.48
PKN3-201ENST00000291906 UBE2D4Q9Y2X8 147 aa12.05□□□□□ -0.48
PKN3-201ENST00000291906 SPCS1Q9Y6A9 102 aa12.05□□□□□ -0.48
PKN3-201ENST00000291906 SPINK8P0C7L1 97 aa12.05□□□□□ -0.48
PKN3-201ENST00000291906 DNAJC30Q96LL9 226 aa12.05□□□□□ -0.48
PKN3-201ENST00000291906 TRAV13-1A0A0B4J241 112 aa12.04□□□□□ -0.48
PKN3-201ENST00000291906 TRAV4A0A0B4J268 109 aa12.04□□□□□ -0.48
PKN3-201ENST00000291906 LINC00694P0DN24 101 aa12.04□□□□□ -0.48
PKN3-201ENST00000291906 C12orf74Q32Q52 190 aa12.04□□□□□ -0.48
PKN3-201ENST00000291906 TM2D2Q9BX73 214 aa12.04□□□□□ -0.48
PKN3-201ENST00000291906 FABP2P12104 132 aa12.04□□□□□ -0.48
PKN3-201ENST00000291906 STAB1Q9NY15 2570 aa12.04□□□□□ -0.48
PKN3-201ENST00000291906 CSNK1G2-AS1Q8NCQ2 148 aa12.03□□□□□ -0.48
PKN3-201ENST00000291906 PTH2Q96A98 100 aa12.03□□□□□ -0.48
PKN3-201ENST00000291906 TMEM223A0PJW6 202 aa12.02□□□□□ -0.48
PKN3-201ENST00000291906 PLAC8L1A1L4L8 177 aa12.02□□□□□ -0.48
PKN3-201ENST00000291906 NFE4Q86UQ8 179 aa12.02□□□□□ -0.48
PKN3-201ENST00000291906 TIMM21Q9BVV7 248 aa12.02□□□□□ -0.48
PKN3-201ENST00000291906 A0A1W2PPM0 123 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms