RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 MIFP14174 115 aa13.94□□□□□ -0.18
PCDH1-201ENST00000287008 KIAA1549LQ6ZVL6 1849 aa13.94□□□□□ -0.18
PCDH1-201ENST00000287008 K7EP34 96 aa13.94□□□□□ -0.18
PCDH1-201ENST00000287008 EIF4EBP1Q13541 118 aaPredicted RBP13.94□□□□□ -0.18
PCDH1-201ENST00000287008 CENPFP49454 3210 aa13.94□□□□□ -0.18
PCDH1-201ENST00000287008 BAALC-AS2P0C853 105 aa13.94□□□□□ -0.18
PCDH1-201ENST00000287008 A4D1N5 150 aa13.93□□□□□ -0.18
PCDH1-201ENST00000287008 TP53TG3Q9ULZ0 132 aa13.93□□□□□ -0.18
PCDH1-201ENST00000287008 MUSTN1Q8IVN3 82 aa13.92□□□□□ -0.18
PCDH1-201ENST00000287008 ZNF124Q15973 351 aa13.92□□□□□ -0.18
PCDH1-201ENST00000287008 FAM110AQ9BQ89 295 aa13.92□□□□□ -0.18
PCDH1-201ENST00000287008 C11orf86A6NJI1 115 aa13.92□□□□□ -0.18
PCDH1-201ENST00000287008 NTN5Q8WTR8 489 aaPredicted RBP13.92□□□□□ -0.18
PCDH1-201ENST00000287008 NUPR1O60356 82 aa13.91□□□□□ -0.18
PCDH1-201ENST00000287008 Q8N6K4 173 aa13.91□□□□□ -0.18
PCDH1-201ENST00000287008 GAGE12HA6NDE8 117 aa13.91□□□□□ -0.18
PCDH1-201ENST00000287008 TANC2Q9HCD6 1990 aa13.91□□□□□ -0.18
PCDH1-201ENST00000287008 DAND5Q8N907 189 aa13.9□□□□□ -0.18
PCDH1-201ENST00000287008 C15orf53Q8NAA6 179 aa13.9□□□□□ -0.18
PCDH1-201ENST00000287008 C4orf48Q5BLP8 95 aa13.9□□□□□ -0.19
PCDH1-201ENST00000287008 FLNBO75369 2602 aaKnown RBP13.89□□□□□ -0.19
PCDH1-201ENST00000287008 K7EP13 123 aa13.89□□□□□ -0.19
PCDH1-201ENST00000287008 P0DMU3 169 aa13.89□□□□□ -0.19
PCDH1-201ENST00000287008 FAM231AP0DMU4 169 aa13.89□□□□□ -0.19
PCDH1-201ENST00000287008 FAM231CP0DMU5 169 aa13.89□□□□□ -0.19
PCDH1-201ENST00000287008 E9PLD3 99 aa13.89□□□□□ -0.19
PCDH1-201ENST00000287008 Q6ZUT4 128 aa13.89□□□□□ -0.19
PCDH1-201ENST00000287008 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.89□□□□□ -0.19
PCDH1-201ENST00000287008 KRTAP10-9P60411 292 aa13.88□□□□□ -0.19
PCDH1-201ENST00000287008 ZNF295-AS1Q8N0V1 137 aa13.88□□□□□ -0.19
PCDH1-201ENST00000287008 LINC00269Q8N2A0 174 aa13.88□□□□□ -0.19
PCDH1-201ENST00000287008 MIR7-3HGQ8N6C7 128 aa13.88□□□□□ -0.19
PCDH1-201ENST00000287008 IGKV2-24A0A0C4DH68 120 aa13.88□□□□□ -0.19
PCDH1-201ENST00000287008 LINC00322Q6ZN03 302 aaPredicted RBP13.88□□□□□ -0.19
PCDH1-201ENST00000287008 C20orf173Q96LM9 149 aa13.88□□□□□ -0.19
PCDH1-201ENST00000287008 CEMP1Q6PRD7 247 aaPredicted RBP13.88□□□□□ -0.19
PCDH1-201ENST00000287008 MLST8Q9BVC4 326 aa13.88□□□□□ -0.19
PCDH1-201ENST00000287008 IGHV1-58A0A0C4DH39 117 aa13.87□□□□□ -0.19
PCDH1-201ENST00000287008 IGLC6P0CF74 106 aa13.87□□□□□ -0.19
PCDH1-201ENST00000287008 REG3AQ06141 175 aa13.87□□□□□ -0.19
PCDH1-201ENST00000287008 FRMD6-AS1P0C7T7 363 aa13.87□□□□□ -0.19
PCDH1-201ENST00000287008 KIAA1549Q9HCM3 1950 aa13.87□□□□□ -0.19
PCDH1-201ENST00000287008 NDUFS5O43920 106 aa13.87□□□□□ -0.19
PCDH1-201ENST00000287008 TTTY13Q9BZ97 58 aa13.87□□□□□ -0.19
PCDH1-201ENST00000287008 HIGD2BQ4VC39 106 aa13.86□□□□□ -0.19
PCDH1-201ENST00000287008 CRYGDP07320 174 aa13.86□□□□□ -0.19
PCDH1-201ENST00000287008 ZFAND2AQ8N6M9 145 aa13.86□□□□□ -0.19
PCDH1-201ENST00000287008 AVPP01185 164 aa13.85□□□□□ -0.19
PCDH1-201ENST00000287008 ODF1Q14990 250 aa13.85□□□□□ -0.19
PCDH1-201ENST00000287008 HIST2H2BDQ6DRA6 164 aa13.85□□□□□ -0.19
PCDH1-201ENST00000287008 NCR3O14931 201 aa13.84□□□□□ -0.19
PCDH1-201ENST00000287008 IGLV2-8P01709 118 aa13.84□□□□□ -0.19
PCDH1-201ENST00000287008 DIRC1Q969H9 104 aa13.84□□□□□ -0.19
PCDH1-201ENST00000287008 MUC22E2RYF6 1773 aaPredicted RBP13.84□□□□□ -0.19
PCDH1-201ENST00000287008 MBD6Q96DN6 1003 aa13.84□□□□□ -0.19
PCDH1-201ENST00000287008 A0A1B0GXF2 115 aa13.83□□□□□ -0.2
PCDH1-201ENST00000287008 Q6ZS46 218 aa13.83□□□□□ -0.2
PCDH1-201ENST00000287008 CITED1Q99966 193 aa13.83□□□□□ -0.2
PCDH1-201ENST00000287008 TRAV10A0A0B4J240 114 aa13.83□□□□□ -0.2
PCDH1-201ENST00000287008 NDUFB1O75438 58 aa13.83□□□□□ -0.2
PCDH1-201ENST00000287008 ACANP16112 2415 aa13.83□□□□□ -0.2
PCDH1-201ENST00000287008 UFSP1Q6NVU6 142 aa13.82□□□□□ -0.2
PCDH1-201ENST00000287008 KIR2DL5BA0A0G2JN68 375 aa13.82□□□□□ -0.2
PCDH1-201ENST00000287008 KIR2DL5BA0A0G2JPC4 375 aa13.82□□□□□ -0.2
PCDH1-201ENST00000287008 KIR2DL5AQ8N109 375 aa13.82□□□□□ -0.2
PCDH1-201ENST00000287008 ANKRD29Q8N6D5 301 aa13.82□□□□□ -0.2
PCDH1-201ENST00000287008 IGLV1-40P01703 118 aa13.82□□□□□ -0.2
PCDH1-201ENST00000287008 GDF5OSQ5U4N7 250 aa13.82□□□□□ -0.2
PCDH1-201ENST00000287008 SMR3AQ99954 134 aa13.82□□□□□ -0.2
PCDH1-201ENST00000287008 TRACP01848 142 aa13.81□□□□□ -0.2
PCDH1-201ENST00000287008 TRBV6-4A0A1B0GX49 114 aa13.81□□□□□ -0.2
PCDH1-201ENST00000287008 CRYBA4P53673 196 aa13.81□□□□□ -0.2
PCDH1-201ENST00000287008 H3BQ85 93 aa13.8□□□□□ -0.2
PCDH1-201ENST00000287008 CHCHD10Q8WYQ3 142 aaPredicted RBP13.8□□□□□ -0.2
PCDH1-201ENST00000287008 HIGD1BQ9P298 99 aa13.8□□□□□ -0.2
PCDH1-201ENST00000287008 HCFC1P51610 2035 aa13.8□□□□□ -0.2
PCDH1-201ENST00000287008 IGHV4-28A0A0C4DH34 117 aa13.8□□□□□ -0.2
PCDH1-201ENST00000287008 KIR2DL5BQ8NHK3 375 aa13.8□□□□□ -0.2
PCDH1-201ENST00000287008 SPANXDQ9BXN6 97 aa13.79□□□□□ -0.2
PCDH1-201ENST00000287008 LECT2O14960 151 aa13.79□□□□□ -0.2
PCDH1-201ENST00000287008 C9orf153Q5TBE3 101 aa13.79□□□□□ -0.2
PCDH1-201ENST00000287008 C18orf65Q6ZTR6 163 aa13.79□□□□□ -0.2
PCDH1-201ENST00000287008 CFAP126Q5VTH2 177 aa13.78□□□□□ -0.2
PCDH1-201ENST00000287008 LINC00467Q9BRT7 94 aa13.78□□□□□ -0.2
PCDH1-201ENST00000287008 NEXN-AS1Q8NBZ9 246 aa13.78□□□□□ -0.2
PCDH1-201ENST00000287008 WFDC10AQ9H1F0 79 aa13.78□□□□□ -0.2
PCDH1-201ENST00000287008 NDUFA7O95182 113 aa13.78□□□□□ -0.2
PCDH1-201ENST00000287008 OXLD1Q5BKU9 147 aa13.78□□□□□ -0.2
PCDH1-201ENST00000287008 TRBV6-8A0A0A6YYG3 113 aa13.77□□□□□ -0.2
PCDH1-201ENST00000287008 H7C423 109 aa13.77□□□□□ -0.2
PCDH1-201ENST00000287008 FXYD2P54710 66 aa13.77□□□□□ -0.2
PCDH1-201ENST00000287008 RS1O15537 224 aa13.76□□□□□ -0.21
PCDH1-201ENST00000287008 NUP210LQ5VU65 1888 aa13.76□□□□□ -0.21
PCDH1-201ENST00000287008 TDRG1Q3Y452 100 aa13.76□□□□□ -0.21
PCDH1-201ENST00000287008 A0A1W2PPR1 153 aa13.76□□□□□ -0.21
PCDH1-201ENST00000287008 BBC3Q96PG8 261 aaPredicted RBP13.76□□□□□ -0.21
PCDH1-201ENST00000287008 HIGD2AQ9BW72 106 aa13.76□□□□□ -0.21
PCDH1-201ENST00000287008 NREPQ16612 68 aa13.75□□□□□ -0.21
PCDH1-201ENST00000287008 LINC01620Q4KN68 170 aa13.75□□□□□ -0.21
PCDH1-201ENST00000287008 CDKN2A-AS1Q9UH64 79 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms