RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 TRAV13-2A0A0B4J235 113 aa10.27□□□□□ -0.77
NPC1-201ENST00000269228 TRBV10-1A0A0K0K1A3 114 aa10.27□□□□□ -0.77
NPC1-201ENST00000269228 K7ERJ3 54 aa10.27□□□□□ -0.77
NPC1-201ENST00000269228 EXPH5Q8NEV8 1989 aa10.27□□□□□ -0.77
NPC1-201ENST00000269228 CDK2AP2O75956 126 aa10.26□□□□□ -0.77
NPC1-201ENST00000269228 ZFAND2AQ8N6M9 145 aa10.26□□□□□ -0.77
NPC1-201ENST00000269228 TOMM6Q96B49 74 aa10.26□□□□□ -0.77
NPC1-201ENST00000269228 IGLC6P0CF74 106 aa10.26□□□□□ -0.77
NPC1-201ENST00000269228 TAL2Q16559 108 aa10.26□□□□□ -0.77
NPC1-201ENST00000269228 SS18L2Q9UHA2 77 aa10.26□□□□□ -0.77
NPC1-201ENST00000269228 HERV-K104P63124 156 aa10.26□□□□□ -0.77
NPC1-201ENST00000269228 C20orf203Q8NBC4 194 aa10.26□□□□□ -0.77
NPC1-201ENST00000269228 BAALCQ8WXS3 180 aa10.26□□□□□ -0.77
NPC1-201ENST00000269228 H3BMG7 143 aa10.25□□□□□ -0.77
NPC1-201ENST00000269228 ANKRD39Q53RE8 183 aa10.25□□□□□ -0.77
NPC1-201ENST00000269228 GAGE2AQ6NT46 116 aa10.25□□□□□ -0.77
NPC1-201ENST00000269228 OPRPNQ99935 248 aaPredicted RBP10.25□□□□□ -0.77
NPC1-201ENST00000269228 A0A1W2PPM0 123 aa10.25□□□□□ -0.77
NPC1-201ENST00000269228 SMIM9A6NGZ8 99 aa10.25□□□□□ -0.77
NPC1-201ENST00000269228 LINC01545Q5VT33 79 aa10.25□□□□□ -0.77
NPC1-201ENST00000269228 WFDC10AQ9H1F0 79 aa10.25□□□□□ -0.77
NPC1-201ENST00000269228 CEMP1Q6PRD7 247 aaPredicted RBP10.25□□□□□ -0.77
NPC1-201ENST00000269228 TIMM17AQ99595 171 aa10.25□□□□□ -0.77
NPC1-201ENST00000269228 A0A1B0GXF2 115 aa10.24□□□□□ -0.77
NPC1-201ENST00000269228 COX7B2Q8TF08 81 aa10.24□□□□□ -0.77
NPC1-201ENST00000269228 SIVA1O15304 175 aa10.24□□□□□ -0.77
NPC1-201ENST00000269228 TRBV20-1A0A075B6N2 111 aa10.23□□□□□ -0.77
NPC1-201ENST00000269228 HIST1H4AP62805 103 aaKnown RBP10.23□□□□□ -0.77
NPC1-201ENST00000269228 CRIP1P50238 77 aa10.23□□□□□ -0.77
NPC1-201ENST00000269228 LYRM9A8MSI8 78 aa10.23□□□□□ -0.77
NPC1-201ENST00000269228 B5MCH6 92 aa10.23□□□□□ -0.77
NPC1-201ENST00000269228 TTTY13Q9BZ97 58 aa10.23□□□□□ -0.77
NPC1-201ENST00000269228 TRAV12-1A0A0B4J245 112 aa10.22□□□□□ -0.77
NPC1-201ENST00000269228 SPATA25Q9BR10 227 aa10.22□□□□□ -0.77
NPC1-201ENST00000269228 ADAMTS20P59510 1910 aa10.22□□□□□ -0.77
NPC1-201ENST00000269228 PRSS47A8MTI9 375 aa10.22□□□□□ -0.77
NPC1-201ENST00000269228 F8W1H4 67 aa10.21□□□□□ -0.77
NPC1-201ENST00000269228 C9orf153Q5TBE3 101 aa10.21□□□□□ -0.77
NPC1-201ENST00000269228 C11orf86A6NJI1 115 aa10.21□□□□□ -0.77
NPC1-201ENST00000269228 C12orf74Q32Q52 190 aa10.21□□□□□ -0.77
NPC1-201ENST00000269228 DEFB131BA0A096LNP1 70 aa10.21□□□□□ -0.78
NPC1-201ENST00000269228 TM2D2Q9BX73 214 aa10.21□□□□□ -0.78
NPC1-201ENST00000269228 NDUFA1O15239 70 aa10.2□□□□□ -0.78
NPC1-201ENST00000269228 SPAG11BQ08648 103 aa10.2□□□□□ -0.78
NPC1-201ENST00000269228 Q6ZUT4 128 aa10.2□□□□□ -0.78
NPC1-201ENST00000269228 DAND5Q8N907 189 aa10.2□□□□□ -0.78
NPC1-201ENST00000269228 ACANP16112 2415 aa10.2□□□□□ -0.78
NPC1-201ENST00000269228 IL17DQ8TAD2 202 aa10.2□□□□□ -0.78
NPC1-201ENST00000269228 SOCS3O14543 225 aa10.2□□□□□ -0.78
NPC1-201ENST00000269228 SND1-IT1Q9HBX3 110 aa10.2□□□□□ -0.78
NPC1-201ENST00000269228 IGLV2-11P01706 119 aa10.19□□□□□ -0.78
NPC1-201ENST00000269228 MIFP14174 115 aa10.19□□□□□ -0.78
NPC1-201ENST00000269228 CFC1BP0CG36 223 aa10.19□□□□□ -0.78
NPC1-201ENST00000269228 CFC1P0CG37 223 aa10.19□□□□□ -0.78
NPC1-201ENST00000269228 OXLD1Q5BKU9 147 aa10.19□□□□□ -0.78
NPC1-201ENST00000269228 IGHV4-4A0A075B6R2 117 aa10.19□□□□□ -0.78
NPC1-201ENST00000269228 NDUFA7O95182 113 aa10.19□□□□□ -0.78
NPC1-201ENST00000269228 PRRC2CQ9Y520 2896 aaKnown RBP10.19□□□□□ -0.78
NPC1-201ENST00000269228 PPDPFLQ8WWR9 84 aa10.19□□□□□ -0.78
NPC1-201ENST00000269228 PRB2P02812 416 aaPredicted RBP10.18□□□□□ -0.78
NPC1-201ENST00000269228 EDN2P20800 178 aa10.18□□□□□ -0.78
NPC1-201ENST00000269228 MUSTN1Q8IVN3 82 aa10.18□□□□□ -0.78
NPC1-201ENST00000269228 TIRAPP58753 221 aa10.18□□□□□ -0.78
NPC1-201ENST00000269228 ODF1Q14990 250 aa10.18□□□□□ -0.78
NPC1-201ENST00000269228 CFAP126Q5VTH2 177 aa10.18□□□□□ -0.78
NPC1-201ENST00000269228 DCANP1Q8TF63 244 aa10.18□□□□□ -0.78
NPC1-201ENST00000269228 INAFM2P0DMQ5 153 aa10.17□□□□□ -0.78
NPC1-201ENST00000269228 IFITM1P13164 125 aa10.17□□□□□ -0.78
NPC1-201ENST00000269228 PRR9Q5T870 116 aa10.17□□□□□ -0.78
NPC1-201ENST00000269228 SMIM20Q8N5G0 67 aa10.17□□□□□ -0.78
NPC1-201ENST00000269228 LINC00269Q8N2A0 174 aa10.17□□□□□ -0.78
NPC1-201ENST00000269228 PRM2P04554 102 aa10.17□□□□□ -0.78
NPC1-201ENST00000269228 PROK1P58294 105 aa10.17□□□□□ -0.78
NPC1-201ENST00000269228 CARD19Q96LW7 228 aa10.17□□□□□ -0.78
NPC1-201ENST00000269228 PKIGQ9Y2B9 76 aa10.16□□□□□ -0.78
NPC1-201ENST00000269228 IGHV4-28A0A0C4DH34 117 aa10.16□□□□□ -0.78
NPC1-201ENST00000269228 ETDCA0A1B0GVM5 59 aa10.16□□□□□ -0.78
NPC1-201ENST00000269228 NEXN-AS1Q8NBZ9 246 aa10.16□□□□□ -0.78
NPC1-201ENST00000269228 DEFB105AQ8NG35 78 aa10.16□□□□□ -0.78
NPC1-201ENST00000269228 A4D1N5 150 aa10.16□□□□□ -0.78
NPC1-201ENST00000269228 E9PLD3 99 aa10.15□□□□□ -0.78
NPC1-201ENST00000269228 LINC00467Q9BRT7 94 aa10.15□□□□□ -0.78
NPC1-201ENST00000269228 C11orf21Q9P2W6 132 aa10.15□□□□□ -0.78
NPC1-201ENST00000269228 REG3AQ06141 175 aa10.14□□□□□ -0.79
NPC1-201ENST00000269228 ANKRD17O75179 2603 aaKnown RBP10.14□□□□□ -0.79
NPC1-201ENST00000269228 M0QY20 66 aa10.14□□□□□ -0.79
NPC1-201ENST00000269228 HIGD2BQ4VC39 106 aa10.14□□□□□ -0.79
NPC1-201ENST00000269228 IGHV1-58A0A0C4DH39 117 aa10.13□□□□□ -0.79
NPC1-201ENST00000269228 KLLNB2CW77 178 aa10.13□□□□□ -0.79
NPC1-201ENST00000269228 CXCL5P42830 114 aa10.13□□□□□ -0.79
NPC1-201ENST00000269228 RNASE3P12724 160 aaKnown RBP10.13□□□□□ -0.79
NPC1-201ENST00000269228 FLNBO75369 2602 aaKnown RBP10.13□□□□□ -0.79
NPC1-201ENST00000269228 TAX1BP3O14907 124 aa10.13□□□□□ -0.79
NPC1-201ENST00000269228 RS1O15537 224 aa10.13□□□□□ -0.79
NPC1-201ENST00000269228 CRIP2P52943 208 aaPredicted RBP10.13□□□□□ -0.79
NPC1-201ENST00000269228 DSCR8Q96T75 97 aa10.12□□□□□ -0.79
NPC1-201ENST00000269228 TINCRA0A1B0GVN0 87 aa10.12□□□□□ -0.79
NPC1-201ENST00000269228 TRBV6-4A0A1B0GX49 114 aa10.12□□□□□ -0.79
NPC1-201ENST00000269228 ODF3L2Q3SX64 289 aa10.12□□□□□ -0.79
NPC1-201ENST00000269228 MIR7-3HGQ8N6C7 128 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms