RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 NPC2P61916 151 aa16.21■□□□□ 0.19
CDR2-201ENST00000268383 NIPBLQ6KC79 2804 aaeCLIP16.21■□□□□ 0.19
CDR2-201ENST00000268383 RBMY1BA6NDE4 496 aaKnown RBP16.2■□□□□ 0.18
CDR2-201ENST00000268383 RBMY1EA6NEQ0 496 aaKnown RBP16.2■□□□□ 0.18
CDR2-201ENST00000268383 RBMY1DP0C7P1 496 aaKnown RBP16.2■□□□□ 0.18
CDR2-201ENST00000268383 ANKRD29Q8N6D5 301 aa16.2■□□□□ 0.18
CDR2-201ENST00000268383 IGHV3-38A0A0C4DH36 116 aa16.2■□□□□ 0.18
CDR2-201ENST00000268383 IGHV3-33P01772 117 aa16.2■□□□□ 0.18
CDR2-201ENST00000268383 IGHV3-30-3P0DP02 117 aa16.19■□□□□ 0.18
CDR2-201ENST00000268383 TMEM263Q8WUH6 116 aaKnown RBP16.19■□□□□ 0.18
CDR2-201ENST00000268383 NAV2Q8IVL1 2488 aa16.19■□□□□ 0.18
CDR2-201ENST00000268383 TEN1Q86WV5 123 aa16.19■□□□□ 0.18
CDR2-201ENST00000268383 A0A0J9YXY3 114 aa16.18■□□□□ 0.18
CDR2-201ENST00000268383 CKS1BP61024 79 aa16.18■□□□□ 0.18
CDR2-201ENST00000268383 ATP6V0E2Q8NHE4 81 aa16.18■□□□□ 0.18
CDR2-201ENST00000268383 ZNF462Q96JM2 2506 aa16.18■□□□□ 0.18
CDR2-201ENST00000268383 TRGV11A0A075B6L2 103 aa16.18■□□□□ 0.18
CDR2-201ENST00000268383 C9JAW5 83 aa16.18■□□□□ 0.18
CDR2-201ENST00000268383 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.18■□□□□ 0.18
CDR2-201ENST00000268383 IGKV2-29A2NJV5 120 aaPredicted RBP16.18■□□□□ 0.18
CDR2-201ENST00000268383 A8MWV9 139 aa16.18■□□□□ 0.18
CDR2-201ENST00000268383 XGP55808 180 aa16.18■□□□□ 0.18
CDR2-201ENST00000268383 Q1RN00 199 aa16.18■□□□□ 0.18
CDR2-201ENST00000268383 Q6ZSV7 163 aa16.18■□□□□ 0.18
CDR2-201ENST00000268383 PRSS2P07478 247 aa16.17■□□□□ 0.18
CDR2-201ENST00000268383 LINC01356Q8N9X3 169 aa16.17■□□□□ 0.18
CDR2-201ENST00000268383 A0A1B0GV72 72 aa16.17■□□□□ 0.18
CDR2-201ENST00000268383 LYRM7Q5U5X0 104 aa16.17■□□□□ 0.18
CDR2-201ENST00000268383 ZNF702PQ9H963 129 aa16.17■□□□□ 0.18
CDR2-201ENST00000268383 PPDPFLQ8WWR9 84 aa16.16■□□□□ 0.18
CDR2-201ENST00000268383 ADAMTSL4-AS1Q5T5F5 129 aa16.16■□□□□ 0.18
CDR2-201ENST00000268383 TIMM21Q9BVV7 248 aa16.16■□□□□ 0.18
CDR2-201ENST00000268383 ERG28Q9UKR5 140 aa16.16■□□□□ 0.18
CDR2-201ENST00000268383 JMJD1CQ15652 2540 aa16.15■□□□□ 0.18
CDR2-201ENST00000268383 TRBV20-1A0A075B6N2 111 aa16.15■□□□□ 0.18
CDR2-201ENST00000268383 Q5PR19 223 aa16.15■□□□□ 0.18
CDR2-201ENST00000268383 TNFRSF18Q9Y5U5 241 aa16.15■□□□□ 0.18
CDR2-201ENST00000268383 SPINK8P0C7L1 97 aa16.15■□□□□ 0.18
CDR2-201ENST00000268383 VPREB3Q9UKI3 123 aa16.14■□□□□ 0.17
CDR2-201ENST00000268383 M0R2P5 195 aa16.14■□□□□ 0.17
CDR2-201ENST00000268383 SLC25A20O43772 301 aa16.13■□□□□ 0.17
CDR2-201ENST00000268383 KHDC1LQ5JSQ8 128 aa16.13■□□□□ 0.17
CDR2-201ENST00000268383 TMEM61Q8N0U2 210 aa16.13■□□□□ 0.17
CDR2-201ENST00000268383 H3BMM0 161 aa16.12■□□□□ 0.17
CDR2-201ENST00000268383 Q6ZUT4 128 aa16.12■□□□□ 0.17
CDR2-201ENST00000268383 LITAFQ99732 161 aa16.12■□□□□ 0.17
CDR2-201ENST00000268383 SBSPONQ8IVN8 264 aa16.12■□□□□ 0.17
CDR2-201ENST00000268383 UBE2E2Q96LR5 201 aa16.12■□□□□ 0.17
CDR2-201ENST00000268383 A0A096LNT2 108 aa16.11■□□□□ 0.17
CDR2-201ENST00000268383 GATA3P23771 443 aa16.11■□□□□ 0.17
CDR2-201ENST00000268383 DAND5Q8N907 189 aa16.11■□□□□ 0.17
CDR2-201ENST00000268383 CLUHP3Q96NS8 147 aa16.11■□□□□ 0.17
CDR2-201ENST00000268383 LINC00467Q9BRT7 94 aa16.1■□□□□ 0.17
CDR2-201ENST00000268383 CHCHD7Q9BUK0 85 aa16.1■□□□□ 0.17
CDR2-201ENST00000268383 MRPS36P82909 103 aaKnown RBP16.1■□□□□ 0.17
CDR2-201ENST00000268383 CRYBA4P53673 196 aa16.1■□□□□ 0.17
CDR2-201ENST00000268383 NDUFA12Q9UI09 145 aa16.09■□□□□ 0.17
CDR2-201ENST00000268383 CCDC168Q8NDH2 2452 aa16.09■□□□□ 0.17
CDR2-201ENST00000268383 A0A0B4J2C4 111 aa16.09■□□□□ 0.17
CDR2-201ENST00000268383 TMEM89A2RUT3 159 aa16.09■□□□□ 0.17
CDR2-201ENST00000268383 LINC01587Q99440 93 aa16.08■□□□□ 0.16
CDR2-201ENST00000268383 TRIAP1O43715 76 aa16.08■□□□□ 0.16
CDR2-201ENST00000268383 UBE2D4Q9Y2X8 147 aa16.08■□□□□ 0.16
CDR2-201ENST00000268383 NBPF19A0A087WUL8 3843 aa16.07■□□□□ 0.16
CDR2-201ENST00000268383 GEMIN7Q9H840 131 aaKnown RBP16.07■□□□□ 0.16
CDR2-201ENST00000268383 PYGO1Q9Y3Y4 419 aa16.07■□□□□ 0.16
CDR2-201ENST00000268383 TRAV26-1A0A087WT03 109 aa16.07■□□□□ 0.16
CDR2-201ENST00000268383 CR1P17927 2039 aa16.07■□□□□ 0.16
CDR2-201ENST00000268383 IGHV1-58A0A0C4DH39 117 aa16.06■□□□□ 0.16
CDR2-201ENST00000268383 Q6YL49 198 aa16.06■□□□□ 0.16
CDR2-201ENST00000268383 IGHV3OR16-12A0A075B7B8 117 aa16.06■□□□□ 0.16
CDR2-201ENST00000268383 PRB1P04280 392 aa16.06■□□□□ 0.16
CDR2-201ENST00000268383 NTN5Q8WTR8 489 aaPredicted RBP16.06■□□□□ 0.16
CDR2-201ENST00000268383 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.05■□□□□ 0.16
CDR2-201ENST00000268383 VSIG2Q96IQ7 327 aa16.04■□□□□ 0.16
CDR2-201ENST00000268383 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.03■□□□□ 0.16
CDR2-201ENST00000268383 KRTAP10-9P60411 292 aa16.03■□□□□ 0.16
CDR2-201ENST00000268383 RNF152Q8N8N0 203 aa16.03■□□□□ 0.16
CDR2-201ENST00000268383 MAP6D1Q9H9H5 199 aa16.03■□□□□ 0.16
CDR2-201ENST00000268383 CDKN2A-AS1Q9UH64 79 aa16.03■□□□□ 0.16
CDR2-201ENST00000268383 A0A0U1RRA0 63 aa16.03■□□□□ 0.16
CDR2-201ENST00000268383 LINC01620Q4KN68 170 aa16.03■□□□□ 0.16
CDR2-201ENST00000268383 C11orf44Q8N8P7 122 aa16.03■□□□□ 0.16
CDR2-201ENST00000268383 XCL2Q9UBD3 114 aa16.03■□□□□ 0.16
CDR2-201ENST00000268383 TEX49A0A1B0GTD5 131 aa16.03■□□□□ 0.16
CDR2-201ENST00000268383 DSCR9P59020 149 aa16.03■□□□□ 0.16
CDR2-201ENST00000268383 ZNF415Q09FC8 603 aa16.03■□□□□ 0.16
CDR2-201ENST00000268383 NDUFA7O95182 113 aa16.02■□□□□ 0.16
CDR2-201ENST00000268383 C11orf72Q8NBR9 251 aa16.02■□□□□ 0.16
CDR2-201ENST00000268383 CLEC2BQ92478 149 aa16.01■□□□□ 0.15
CDR2-201ENST00000268383 ZNF625Q96I27 306 aaPredicted RBP16.01■□□□□ 0.15
CDR2-201ENST00000268383 COX6A2Q02221 97 aa16.01■□□□□ 0.15
CDR2-201ENST00000268383 IGHV4-31P0DP07 118 aa16■□□□□ 0.15
CDR2-201ENST00000268383 SETXQ7Z333 2677 aaKnown RBP16■□□□□ 0.15
CDR2-201ENST00000268383 TINCRA0A1B0GVN0 87 aa16■□□□□ 0.15
CDR2-201ENST00000268383 ATXN8Q156A1 80 aa16■□□□□ 0.15
CDR2-201ENST00000268383 DYNLRB2Q8TF09 96 aa16■□□□□ 0.15
CDR2-201ENST00000268383 EDA2RQ9HAV5 297 aa15.99■□□□□ 0.15
CDR2-201ENST00000268383 J3QLI3 93 aa15.98■□□□□ 0.15
CDR2-201ENST00000268383 ICOSQ9Y6W8 199 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms