RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 C20orf203Q8NBC4 194 aa12.35□□□□□ -0.43
SQLE-201ENST00000265896 CLUHP3Q96NS8 147 aa12.35□□□□□ -0.43
SQLE-201ENST00000265896 TIMM17AQ99595 171 aa12.35□□□□□ -0.43
SQLE-201ENST00000265896 RHODO00212 210 aa12.34□□□□□ -0.43
SQLE-201ENST00000265896 MED14OSP0DP75 135 aa12.34□□□□□ -0.43
SQLE-201ENST00000265896 TMEM141Q96I45 108 aa12.34□□□□□ -0.43
SQLE-201ENST00000265896 C9orf85Q96MD7 179 aa12.34□□□□□ -0.43
SQLE-201ENST00000265896 ATP6V0BQ99437 205 aa12.34□□□□□ -0.43
SQLE-201ENST00000265896 A8MWV9 139 aa12.33□□□□□ -0.43
SQLE-201ENST00000265896 CFHR3Q02985 330 aa12.33□□□□□ -0.43
SQLE-201ENST00000265896 TCTEX1D4Q5JR98 221 aa12.33□□□□□ -0.43
SQLE-201ENST00000265896 ADAMTSL4-AS1Q5T5F5 129 aa12.33□□□□□ -0.43
SQLE-201ENST00000265896 TMEM223A0PJW6 202 aa12.33□□□□□ -0.44
SQLE-201ENST00000265896 K7EQG2 157 aa12.33□□□□□ -0.44
SQLE-201ENST00000265896 FLNAP21333 2647 aaKnown RBP12.33□□□□□ -0.44
SQLE-201ENST00000265896 I3L3M4 83 aa12.32□□□□□ -0.44
SQLE-201ENST00000265896 GCN1Q92616 2671 aaKnown RBP12.32□□□□□ -0.44
SQLE-201ENST00000265896 PRB1P04280 392 aa12.32□□□□□ -0.44
SQLE-201ENST00000265896 IGHV3-30-3P0DP02 117 aa12.32□□□□□ -0.44
SQLE-201ENST00000265896 NDUFA7O95182 113 aa12.31□□□□□ -0.44
SQLE-201ENST00000265896 ERG28Q9UKR5 140 aa12.31□□□□□ -0.44
SQLE-201ENST00000265896 LINC01619G3V211 115 aa12.31□□□□□ -0.44
SQLE-201ENST00000265896 SLC25A20O43772 301 aa12.31□□□□□ -0.44
SQLE-201ENST00000265896 PAPPA-AS1Q5QFB9 102 aa12.31□□□□□ -0.44
SQLE-201ENST00000265896 POM121L12Q8N7R1 296 aa12.31□□□□□ -0.44
SQLE-201ENST00000265896 Q6ZUT4 128 aa12.3□□□□□ -0.44
SQLE-201ENST00000265896 TEN1Q86WV5 123 aa12.3□□□□□ -0.44
SQLE-201ENST00000265896 TRAV26-1A0A087WT03 109 aa12.3□□□□□ -0.44
SQLE-201ENST00000265896 B4DSR2 109 aa12.3□□□□□ -0.44
SQLE-201ENST00000265896 IGHV3-53P01767 116 aa12.3□□□□□ -0.44
SQLE-201ENST00000265896 NTN5Q8WTR8 489 aaPredicted RBP12.3□□□□□ -0.44
SQLE-201ENST00000265896 NOTCH2Q04721 2471 aa12.3□□□□□ -0.44
SQLE-201ENST00000265896 A0A0J9YXY3 114 aa12.3□□□□□ -0.44
SQLE-201ENST00000265896 IGHV3-33P01772 117 aa12.3□□□□□ -0.44
SQLE-201ENST00000265896 GATA3P23771 443 aa12.3□□□□□ -0.44
SQLE-201ENST00000265896 TEX49A0A1B0GTD5 131 aa12.29□□□□□ -0.44
SQLE-201ENST00000265896 RBMY1BA6NDE4 496 aaKnown RBP12.29□□□□□ -0.44
SQLE-201ENST00000265896 RBMY1EA6NEQ0 496 aaKnown RBP12.29□□□□□ -0.44
SQLE-201ENST00000265896 RBMY1DP0C7P1 496 aaKnown RBP12.29□□□□□ -0.44
SQLE-201ENST00000265896 TIMM21Q9BVV7 248 aa12.29□□□□□ -0.44
SQLE-201ENST00000265896 TNFRSF18Q9Y5U5 241 aa12.29□□□□□ -0.44
SQLE-201ENST00000265896 ITPR3Q14573 2671 aa12.29□□□□□ -0.44
SQLE-201ENST00000265896 APCP25054 2843 aa12.29□□□□□ -0.44
SQLE-201ENST00000265896 H3BUA1 57 aa12.29□□□□□ -0.44
SQLE-201ENST00000265896 UBE2E2Q96LR5 201 aa12.29□□□□□ -0.44
SQLE-201ENST00000265896 CIDEAO60543 219 aa12.28□□□□□ -0.44
SQLE-201ENST00000265896 CLEC2BQ92478 149 aa12.28□□□□□ -0.44
SQLE-201ENST00000265896 FAM104AQ969W3 186 aa12.28□□□□□ -0.44
SQLE-201ENST00000265896 GEMIN7Q9H840 131 aaKnown RBP12.28□□□□□ -0.44
SQLE-201ENST00000265896 A0A1W2PRX2 142 aa12.28□□□□□ -0.44
SQLE-201ENST00000265896 LEPROTO15243 131 aa12.28□□□□□ -0.44
SQLE-201ENST00000265896 TMEM263Q8WUH6 116 aaKnown RBP12.28□□□□□ -0.44
SQLE-201ENST00000265896 PPDPFLQ8WWR9 84 aa12.28□□□□□ -0.44
SQLE-201ENST00000265896 USP24Q9UPU5 2620 aa12.28□□□□□ -0.44
SQLE-201ENST00000265896 K7EMT4 169 aa12.27□□□□□ -0.44
SQLE-201ENST00000265896 XCL2Q9UBD3 114 aa12.27□□□□□ -0.44
SQLE-201ENST00000265896 A0A1B0GV72 72 aa12.27□□□□□ -0.45
SQLE-201ENST00000265896 TMEM61Q8N0U2 210 aa12.27□□□□□ -0.45
SQLE-201ENST00000265896 TRBV6-5A0A0K0K1A5 114 aa12.26□□□□□ -0.45
SQLE-201ENST00000265896 TRIAP1O43715 76 aa12.26□□□□□ -0.45
SQLE-201ENST00000265896 LINC01587Q99440 93 aa12.26□□□□□ -0.45
SQLE-201ENST00000265896 LINC00467Q9BRT7 94 aa12.26□□□□□ -0.45
SQLE-201ENST00000265896 NSUN5P1Q3KNT7 163 aa12.26□□□□□ -0.45
SQLE-201ENST00000265896 NDUFA12Q9UI09 145 aa12.26□□□□□ -0.45
SQLE-201ENST00000265896 TRBV7-9A0A0J9YWB2 115 aa12.24□□□□□ -0.45
SQLE-201ENST00000265896 CRLF1O75462 422 aa12.24□□□□□ -0.45
SQLE-201ENST00000265896 CRYBA4P53673 196 aa12.24□□□□□ -0.45
SQLE-201ENST00000265896 HIVEP2P31629 2446 aa12.24□□□□□ -0.45
SQLE-201ENST00000265896 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.24□□□□□ -0.45
SQLE-201ENST00000265896 TRBV20-1A0A075B6N2 111 aa12.23□□□□□ -0.45
SQLE-201ENST00000265896 RNF183Q96D59 192 aa12.23□□□□□ -0.45
SQLE-201ENST00000265896 RHOHQ15669 191 aa12.23□□□□□ -0.45
SQLE-201ENST00000265896 CDKN2A-AS1Q9UH64 79 aa12.23□□□□□ -0.45
SQLE-201ENST00000265896 KRTAP10-9P60411 292 aa12.22□□□□□ -0.45
SQLE-201ENST00000265896 RPL32P62910 135 aaKnown RBP12.22□□□□□ -0.45
SQLE-201ENST00000265896 LYRM7Q5U5X0 104 aa12.22□□□□□ -0.45
SQLE-201ENST00000265896 PRORYQ9H606 182 aa12.22□□□□□ -0.45
SQLE-201ENST00000265896 IGKV3OR2-268A0A0C4DH90 116 aa12.21□□□□□ -0.45
SQLE-201ENST00000265896 TRAV13-1A0A0B4J241 112 aa12.21□□□□□ -0.45
SQLE-201ENST00000265896 BRI3O95415 125 aa12.21□□□□□ -0.46
SQLE-201ENST00000265896 COX6A2Q02221 97 aa12.21□□□□□ -0.46
SQLE-201ENST00000265896 TRGV11A0A075B6L2 103 aa12.2□□□□□ -0.46
SQLE-201ENST00000265896 H3BMM0 161 aa12.2□□□□□ -0.46
SQLE-201ENST00000265896 M0R2P5 195 aa12.2□□□□□ -0.46
SQLE-201ENST00000265896 DGAT2L7PQ6IED9 249 aa12.2□□□□□ -0.46
SQLE-201ENST00000265896 TRAV4A0A0B4J268 109 aa12.2□□□□□ -0.46
SQLE-201ENST00000265896 LINC01620Q4KN68 170 aa12.2□□□□□ -0.46
SQLE-201ENST00000265896 LITAFQ99732 161 aa12.2□□□□□ -0.46
SQLE-201ENST00000265896 ZNF702PQ9H963 129 aa12.19□□□□□ -0.46
SQLE-201ENST00000265896 CHCHD7Q9BUK0 85 aa12.19□□□□□ -0.46
SQLE-201ENST00000265896 PLA2G2AP14555 144 aa12.18□□□□□ -0.46
SQLE-201ENST00000265896 ATP6V0E2Q8NHE4 81 aa12.18□□□□□ -0.46
SQLE-201ENST00000265896 LINC00694P0DN24 101 aa12.18□□□□□ -0.46
SQLE-201ENST00000265896 SCGB1A1P11684 91 aa12.18□□□□□ -0.46
SQLE-201ENST00000265896 LINC01356Q8N9X3 169 aa12.18□□□□□ -0.46
SQLE-201ENST00000265896 DYNLRB2Q8TF09 96 aa12.18□□□□□ -0.46
SQLE-201ENST00000265896 VPREB3Q9UKI3 123 aa12.18□□□□□ -0.46
SQLE-201ENST00000265896 ITPR2Q14571 2701 aa12.17□□□□□ -0.46
SQLE-201ENST00000265896 UBE2D4Q9Y2X8 147 aa12.17□□□□□ -0.46
SQLE-201ENST00000265896 TRGV1A0A0A0MS02 117 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms