RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 PRO0461Q9UI25 63 aa8.01□□□□□ -1.13
MSH3-201ENST00000265081 CSPG4Q6UVK1 2322 aa8.01□□□□□ -1.13
MSH3-201ENST00000265081 TMEM263Q8WUH6 116 aaKnown RBP8.01□□□□□ -1.13
MSH3-201ENST00000265081 LINC01587Q99440 93 aa8.01□□□□□ -1.13
MSH3-201ENST00000265081 LITAFQ99732 161 aa8.01□□□□□ -1.13
MSH3-201ENST00000265081 CSDC2Q9Y534 153 aaKnown RBP8.01□□□□□ -1.13
MSH3-201ENST00000265081 UBE2D3P61077 147 aa8□□□□□ -1.13
MSH3-201ENST00000265081 UBE2D2P62837 147 aa8□□□□□ -1.13
MSH3-201ENST00000265081 J3QKU1 62 aa8□□□□□ -1.13
MSH3-201ENST00000265081 OVOL2Q9BRP0 275 aa8□□□□□ -1.13
MSH3-201ENST00000265081 CBY1Q9Y3M2 126 aa8□□□□□ -1.13
MSH3-201ENST00000265081 TNFRSF18Q9Y5U5 241 aa8□□□□□ -1.13
MSH3-201ENST00000265081 SPG11Q96JI7 2443 aa8□□□□□ -1.13
MSH3-201ENST00000265081 TRAV4A0A0B4J268 109 aa8□□□□□ -1.13
MSH3-201ENST00000265081 TRBV10-1A0A0K0K1A3 114 aa8□□□□□ -1.13
MSH3-201ENST00000265081 HIST2H2BDQ6DRA6 164 aa8□□□□□ -1.13
MSH3-201ENST00000265081 TMEM238LA0A1B0GVL6 79 aa7.99□□□□□ -1.13
MSH3-201ENST00000265081 A6NJY4 79 aa7.99□□□□□ -1.13
MSH3-201ENST00000265081 CIDEAO60543 219 aa7.99□□□□□ -1.13
MSH3-201ENST00000265081 HIST2H2BCQ6DN03 193 aa7.99□□□□□ -1.13
MSH3-201ENST00000265081 STHQ8IWL8 128 aa7.99□□□□□ -1.13
MSH3-201ENST00000265081 NAA38Q9BRA0 125 aaKnown RBP7.99□□□□□ -1.13
MSH3-201ENST00000265081 LRRK2Q5S007 2527 aa7.99□□□□□ -1.13
MSH3-201ENST00000265081 LINC00694P0DN24 101 aa7.99□□□□□ -1.13
MSH3-201ENST00000265081 MRPL16Q9NX20 251 aaKnown RBP7.99□□□□□ -1.13
MSH3-201ENST00000265081 POLQO75417 2590 aa7.99□□□□□ -1.13
MSH3-201ENST00000265081 ZNF479Q96JC4 524 aa7.99□□□□□ -1.13
MSH3-201ENST00000265081 G3V4G9 280 aa7.98□□□□□ -1.13
MSH3-201ENST00000265081 EIF4EBP3O60516 100 aaPredicted RBP7.98□□□□□ -1.13
MSH3-201ENST00000265081 EMP1P54849 157 aa7.98□□□□□ -1.13
MSH3-201ENST00000265081 VCX2Q9H322 139 aa7.98□□□□□ -1.13
MSH3-201ENST00000265081 F8W1H4 67 aa7.98□□□□□ -1.13
MSH3-201ENST00000265081 TIRAPP58753 221 aa7.98□□□□□ -1.13
MSH3-201ENST00000265081 NDUFA11Q86Y39 141 aa7.98□□□□□ -1.13
MSH3-201ENST00000265081 RNF183Q96D59 192 aa7.98□□□□□ -1.13
MSH3-201ENST00000265081 A0A0J9YXV3 536 aa7.98□□□□□ -1.13
MSH3-201ENST00000265081 C10orf126Q8N4M7 172 aa7.98□□□□□ -1.13
MSH3-201ENST00000265081 KHDC1LQ5JSQ8 128 aa7.98□□□□□ -1.13
MSH3-201ENST00000265081 GTSF1LQ9H1H1 148 aa7.98□□□□□ -1.13
MSH3-201ENST00000265081 IGHV3-73A0A0B4J1V6 119 aa7.97□□□□□ -1.13
MSH3-201ENST00000265081 TMEM170BQ5T4T1 132 aa7.97□□□□□ -1.13
MSH3-201ENST00000265081 IGHV1-58A0A0C4DH39 117 aa7.97□□□□□ -1.13
MSH3-201ENST00000265081 TSPAN13O95857 204 aa7.97□□□□□ -1.13
MSH3-201ENST00000265081 KRTAP10-3P60369 221 aa7.97□□□□□ -1.13
MSH3-201ENST00000265081 DEFB104AQ8WTQ1 72 aa7.97□□□□□ -1.13
MSH3-201ENST00000265081 CFC1BP0CG36 223 aa7.97□□□□□ -1.13
MSH3-201ENST00000265081 CFC1P0CG37 223 aa7.97□□□□□ -1.13
MSH3-201ENST00000265081 LINC01600Q96MT4 127 aa7.97□□□□□ -1.13
MSH3-201ENST00000265081 SPANXDQ9BXN6 97 aa7.97□□□□□ -1.13
MSH3-201ENST00000265081 SPANXCQ9NY87 97 aa7.97□□□□□ -1.13
MSH3-201ENST00000265081 C16orf74Q96GX8 76 aa7.96□□□□□ -1.13
MSH3-201ENST00000265081 XCL2Q9UBD3 114 aa7.96□□□□□ -1.13
MSH3-201ENST00000265081 K7EQD1 137 aa7.96□□□□□ -1.14
MSH3-201ENST00000265081 LINC00612Q8N6U2 182 aa7.96□□□□□ -1.14
MSH3-201ENST00000265081 YAE1D1Q9NRH1 226 aa7.96□□□□□ -1.14
MSH3-201ENST00000265081 PTPN13Q12923 2485 aa7.96□□□□□ -1.14
MSH3-201ENST00000265081 A0A0B4J2C4 111 aa7.96□□□□□ -1.14
MSH3-201ENST00000265081 IGHV3-30-3P0DP02 117 aa7.96□□□□□ -1.14
MSH3-201ENST00000265081 VSIG2Q96IQ7 327 aa7.96□□□□□ -1.14
MSH3-201ENST00000265081 PPDPFQ9H3Y8 114 aa7.96□□□□□ -1.14
MSH3-201ENST00000265081 ZFYVE26Q68DK2 2539 aa7.96□□□□□ -1.14
MSH3-201ENST00000265081 TIMM17BO60830 172 aa7.95□□□□□ -1.14
MSH3-201ENST00000265081 LGALS3P17931 250 aaKnown RBP7.95□□□□□ -1.14
MSH3-201ENST00000265081 DAZ4Q86SG3 579 aaKnown RBP7.95□□□□□ -1.14
MSH3-201ENST00000265081 DAZ3Q9NR90 486 aaKnown RBP7.95□□□□□ -1.14
MSH3-201ENST00000265081 IGLV5-39A0A0G2JS06 123 aa7.95□□□□□ -1.14
MSH3-201ENST00000265081 A0A0J9YXY3 114 aa7.95□□□□□ -1.14
MSH3-201ENST00000265081 K7ERU9 68 aa7.95□□□□□ -1.14
MSH3-201ENST00000265081 SCGB1D4Q6XE38 83 aa7.95□□□□□ -1.14
MSH3-201ENST00000265081 Q6ZUT4 128 aa7.95□□□□□ -1.14
MSH3-201ENST00000265081 NAV2Q8IVL1 2488 aa7.94□□□□□ -1.14
MSH3-201ENST00000265081 NTM-AS1Q6ZSK4 140 aa7.94□□□□□ -1.14
MSH3-201ENST00000265081 ZFAND6Q6FIF0 208 aa7.94□□□□□ -1.14
MSH3-201ENST00000265081 A0A1W2PRX2 142 aa7.94□□□□□ -1.14
MSH3-201ENST00000265081 H7C423 109 aa7.94□□□□□ -1.14
MSH3-201ENST00000265081 M0QXV9 152 aa7.94□□□□□ -1.14
MSH3-201ENST00000265081 COTL1Q14019 142 aa7.94□□□□□ -1.14
MSH3-201ENST00000265081 CEMP1Q6PRD7 247 aaPredicted RBP7.94□□□□□ -1.14
MSH3-201ENST00000265081 HTN1P15515 57 aa7.93□□□□□ -1.14
MSH3-201ENST00000265081 SAP30O75446 220 aa7.93□□□□□ -1.14
MSH3-201ENST00000265081 Q6ZTI0 123 aa7.93□□□□□ -1.14
MSH3-201ENST00000265081 PGPEP1Q9NXJ5 209 aa7.93□□□□□ -1.14
MSH3-201ENST00000265081 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.93□□□□□ -1.14
MSH3-201ENST00000265081 IGKV2-29A2NJV5 120 aaPredicted RBP7.93□□□□□ -1.14
MSH3-201ENST00000265081 LINC00482Q8N8I6 264 aa7.93□□□□□ -1.14
MSH3-201ENST00000265081 ZNF418Q8TF45 676 aaPredicted RBP7.93□□□□□ -1.14
MSH3-201ENST00000265081 IGHV3OR16-12A0A075B7B8 117 aa7.93□□□□□ -1.14
MSH3-201ENST00000265081 TRBV6-4A0A1B0GX49 114 aa7.93□□□□□ -1.14
MSH3-201ENST00000265081 TMEM238C9JI98 176 aa7.92□□□□□ -1.14
MSH3-201ENST00000265081 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.92□□□□□ -1.14
MSH3-201ENST00000265081 C1QTNF4Q9BXJ3 329 aa7.92□□□□□ -1.14
MSH3-201ENST00000265081 CHD6Q8TD26 2715 aa7.92□□□□□ -1.14
MSH3-201ENST00000265081 ABCA12Q86UK0 2595 aa7.92□□□□□ -1.14
MSH3-201ENST00000265081 SRSF9Q13242 221 aaKnown RBP eCLIP7.92□□□□□ -1.14
MSH3-201ENST00000265081 ATP6V0E2Q8NHE4 81 aa7.92□□□□□ -1.14
MSH3-201ENST00000265081 NDUFA1O15239 70 aa7.91□□□□□ -1.14
MSH3-201ENST00000265081 SETXQ7Z333 2677 aaKnown RBP7.91□□□□□ -1.14
MSH3-201ENST00000265081 TRGV1A0A0A0MS02 117 aa7.91□□□□□ -1.14
MSH3-201ENST00000265081 C11orf44Q8N8P7 122 aa7.91□□□□□ -1.14
MSH3-201ENST00000265081 FLNAP21333 2647 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms