RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 J3QLI3 93 aa11.96□□□□□ -0.5
TM9SF1-201ENST00000261789 J3QR89 54 aa11.96□□□□□ -0.5
TM9SF1-201ENST00000261789 LEPROTO15243 131 aa11.96□□□□□ -0.5
TM9SF1-201ENST00000261789 KHDC1LQ5JSQ8 128 aa11.96□□□□□ -0.5
TM9SF1-201ENST00000261789 TMEM61Q8N0U2 210 aa11.96□□□□□ -0.5
TM9SF1-201ENST00000261789 SIGMAR1Q99720 223 aa11.96□□□□□ -0.5
TM9SF1-201ENST00000261789 H3BMM0 161 aa11.95□□□□□ -0.5
TM9SF1-201ENST00000261789 H7C2G1 150 aa11.95□□□□□ -0.5
TM9SF1-201ENST00000261789 NOTCH3Q9UM47 2321 aa11.95□□□□□ -0.5
TM9SF1-201ENST00000261789 IGHV4-31P0DP07 118 aa11.95□□□□□ -0.5
TM9SF1-201ENST00000261789 CD28P10747 220 aa11.95□□□□□ -0.5
TM9SF1-201ENST00000261789 C10orf126Q8N4M7 172 aa11.95□□□□□ -0.5
TM9SF1-201ENST00000261789 TRAV8-3A0A0A6YYJ7 113 aa11.94□□□□□ -0.5
TM9SF1-201ENST00000261789 PRRC2AP48634 2157 aaKnown RBP11.94□□□□□ -0.5
TM9SF1-201ENST00000261789 MUSTN1Q8IVN3 82 aa11.94□□□□□ -0.5
TM9SF1-201ENST00000261789 PRO1854Q9UHT4 67 aa11.94□□□□□ -0.5
TM9SF1-201ENST00000261789 SETD2Q9BYW2 2564 aaPredicted RBP11.94□□□□□ -0.5
TM9SF1-201ENST00000261789 IGHV3-38A0A0C4DH36 116 aa11.93□□□□□ -0.5
TM9SF1-201ENST00000261789 FOXI1Q12951 378 aa11.93□□□□□ -0.5
TM9SF1-201ENST00000261789 TNFRSF18Q9Y5U5 241 aa11.93□□□□□ -0.5
TM9SF1-201ENST00000261789 A8MZ25 164 aa11.93□□□□□ -0.5
TM9SF1-201ENST00000261789 SCGB1C2P0DMR2 95 aa11.93□□□□□ -0.5
TM9SF1-201ENST00000261789 FSHBP01225 129 aa11.92□□□□□ -0.5
TM9SF1-201ENST00000261789 RNF152Q8N8N0 203 aa11.92□□□□□ -0.5
TM9SF1-201ENST00000261789 C1QTNF4Q9BXJ3 329 aa11.92□□□□□ -0.5
TM9SF1-201ENST00000261789 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.92□□□□□ -0.5
TM9SF1-201ENST00000261789 IGKV2-29A2NJV5 120 aaPredicted RBP11.92□□□□□ -0.5
TM9SF1-201ENST00000261789 SPATA25Q9BR10 227 aa11.92□□□□□ -0.5
TM9SF1-201ENST00000261789 IGHV3-30-3P0DP02 117 aa11.91□□□□□ -0.5
TM9SF1-201ENST00000261789 APCP25054 2843 aa11.91□□□□□ -0.5
TM9SF1-201ENST00000261789 M0R2P5 195 aa11.91□□□□□ -0.5
TM9SF1-201ENST00000261789 LINC01587Q99440 93 aa11.9□□□□□ -0.5
TM9SF1-201ENST00000261789 A0A0J9YXY3 114 aa11.89□□□□□ -0.51
TM9SF1-201ENST00000261789 MAP6D1Q9H9H5 199 aa11.89□□□□□ -0.51
TM9SF1-201ENST00000261789 TIMM21Q9BVV7 248 aa11.89□□□□□ -0.51
TM9SF1-201ENST00000261789 FHL3Q13643 280 aa11.88□□□□□ -0.51
TM9SF1-201ENST00000261789 C11orf44Q8N8P7 122 aa11.88□□□□□ -0.51
TM9SF1-201ENST00000261789 TMEM263Q8WUH6 116 aaKnown RBP11.88□□□□□ -0.51
TM9SF1-201ENST00000261789 CARD19Q96LW7 228 aa11.88□□□□□ -0.51
TM9SF1-201ENST00000261789 CHCHD7Q9BUK0 85 aa11.88□□□□□ -0.51
TM9SF1-201ENST00000261789 A8MWV9 139 aa11.88□□□□□ -0.51
TM9SF1-201ENST00000261789 IGHV3-33P01772 117 aa11.88□□□□□ -0.51
TM9SF1-201ENST00000261789 MRPS36P82909 103 aaKnown RBP11.88□□□□□ -0.51
TM9SF1-201ENST00000261789 NPC2P61916 151 aa11.87□□□□□ -0.51
TM9SF1-201ENST00000261789 DYNLRB2Q8TF09 96 aa11.87□□□□□ -0.51
TM9SF1-201ENST00000261789 LINC00467Q9BRT7 94 aa11.87□□□□□ -0.51
TM9SF1-201ENST00000261789 PYGO1Q9Y3Y4 419 aa11.87□□□□□ -0.51
TM9SF1-201ENST00000261789 PRSS2P07478 247 aa11.87□□□□□ -0.51
TM9SF1-201ENST00000261789 ZNF415Q09FC8 603 aa11.87□□□□□ -0.51
TM9SF1-201ENST00000261789 Q5PR19 223 aa11.87□□□□□ -0.51
TM9SF1-201ENST00000261789 CCDC168Q8NDH2 2452 aa11.87□□□□□ -0.51
TM9SF1-201ENST00000261789 IGHV3OR16-12A0A075B7B8 117 aa11.86□□□□□ -0.51
TM9SF1-201ENST00000261789 SPINK8P0C7L1 97 aa11.86□□□□□ -0.51
TM9SF1-201ENST00000261789 ADAMTSL4-AS1Q5T5F5 129 aa11.86□□□□□ -0.51
TM9SF1-201ENST00000261789 LYRM7Q5U5X0 104 aa11.86□□□□□ -0.51
TM9SF1-201ENST00000261789 Q6ZUT4 128 aa11.86□□□□□ -0.51
TM9SF1-201ENST00000261789 C11orf72Q8NBR9 251 aa11.86□□□□□ -0.51
TM9SF1-201ENST00000261789 XCL2Q9UBD3 114 aa11.86□□□□□ -0.51
TM9SF1-201ENST00000261789 UBE2D4Q9Y2X8 147 aa11.86□□□□□ -0.51
TM9SF1-201ENST00000261789 A8MTW9 85 aa11.86□□□□□ -0.51
TM9SF1-201ENST00000261789 CIDEAO60543 219 aa11.86□□□□□ -0.51
TM9SF1-201ENST00000261789 C2CD3Q4AC94 2353 aa11.86□□□□□ -0.51
TM9SF1-201ENST00000261789 TRBV20-1A0A075B6N2 111 aa11.85□□□□□ -0.51
TM9SF1-201ENST00000261789 LITAFQ99732 161 aa11.85□□□□□ -0.51
TM9SF1-201ENST00000261789 PEMTQ9UBM1 199 aa11.85□□□□□ -0.51
TM9SF1-201ENST00000261789 ERG28Q9UKR5 140 aa11.85□□□□□ -0.51
TM9SF1-201ENST00000261789 JMJD1CQ15652 2540 aa11.85□□□□□ -0.51
TM9SF1-201ENST00000261789 ITPR3Q14573 2671 aa11.85□□□□□ -0.51
TM9SF1-201ENST00000261789 Q1RN00 199 aa11.85□□□□□ -0.51
TM9SF1-201ENST00000261789 DEFB114Q30KQ6 69 aa11.85□□□□□ -0.51
TM9SF1-201ENST00000261789 CDIP1Q9H305 208 aa11.85□□□□□ -0.51
TM9SF1-201ENST00000261789 EDA2RQ9HAV5 297 aa11.85□□□□□ -0.51
TM9SF1-201ENST00000261789 Q6ZSV7 163 aa11.84□□□□□ -0.51
TM9SF1-201ENST00000261789 TEN1Q86WV5 123 aa11.84□□□□□ -0.51
TM9SF1-201ENST00000261789 ATP6V0E2Q8NHE4 81 aa11.84□□□□□ -0.51
TM9SF1-201ENST00000261789 Q96MF0 132 aa11.84□□□□□ -0.51
TM9SF1-201ENST00000261789 ANKRD29Q8N6D5 301 aa11.84□□□□□ -0.51
TM9SF1-201ENST00000261789 C4orf3Q8WVX3 66 aa11.84□□□□□ -0.51
TM9SF1-201ENST00000261789 IGHV1-58A0A0C4DH39 117 aa11.83□□□□□ -0.52
TM9SF1-201ENST00000261789 A0A1W2PRX2 142 aa11.83□□□□□ -0.52
TM9SF1-201ENST00000261789 C9JAW5 83 aa11.83□□□□□ -0.52
TM9SF1-201ENST00000261789 NDUFA12Q9UI09 145 aa11.83□□□□□ -0.52
TM9SF1-201ENST00000261789 Q8N2B8 174 aa11.83□□□□□ -0.52
TM9SF1-201ENST00000261789 KMT2BQ9UMN6 2715 aaPredicted RBP11.83□□□□□ -0.52
TM9SF1-201ENST00000261789 A0A0B4J2C4 111 aa11.82□□□□□ -0.52
TM9SF1-201ENST00000261789 SETXQ7Z333 2677 aaKnown RBP11.82□□□□□ -0.52
TM9SF1-201ENST00000261789 VSIG2Q96IQ7 327 aa11.82□□□□□ -0.52
TM9SF1-201ENST00000261789 IGHV3-53P01767 116 aa11.81□□□□□ -0.52
TM9SF1-201ENST00000261789 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.81□□□□□ -0.52
TM9SF1-201ENST00000261789 DAND5Q8N907 189 aa11.81□□□□□ -0.52
TM9SF1-201ENST00000261789 PPDPFLQ8WWR9 84 aa11.81□□□□□ -0.52
TM9SF1-201ENST00000261789 SLC25A20O43772 301 aa11.81□□□□□ -0.52
TM9SF1-201ENST00000261789 INSP01308 110 aa11.81□□□□□ -0.52
TM9SF1-201ENST00000261789 SCGB1A1P11684 91 aa11.81□□□□□ -0.52
TM9SF1-201ENST00000261789 DEFB113Q30KQ7 82 aa11.81□□□□□ -0.52
TM9SF1-201ENST00000261789 SBSPONQ8IVN8 264 aa11.81□□□□□ -0.52
TM9SF1-201ENST00000261789 TINCRA0A1B0GVN0 87 aa11.8□□□□□ -0.52
TM9SF1-201ENST00000261789 ODF3L2Q3SX64 289 aa11.8□□□□□ -0.52
TM9SF1-201ENST00000261789 CDKN2A-AS1Q9UH64 79 aa11.8□□□□□ -0.52
TM9SF1-201ENST00000261789 MT-ATP8P03928 68 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms