RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 CACNA1AO00555 2505 aa14.16□□□□□ -0.14
SCARB1-201ENST00000261693 FAM208BQ5VWN6 2430 aa14.16□□□□□ -0.14
SCARB1-201ENST00000261693 A0A0B4J2C4 111 aa14.15□□□□□ -0.14
SCARB1-201ENST00000261693 DEFB131AP59861 70 aa14.15□□□□□ -0.14
SCARB1-201ENST00000261693 TNFRSF18Q9Y5U5 241 aa14.15□□□□□ -0.14
SCARB1-201ENST00000261693 NPC2P61916 151 aa14.15□□□□□ -0.14
SCARB1-201ENST00000261693 Q6ZSN1 163 aa14.15□□□□□ -0.14
SCARB1-201ENST00000261693 C18orf65Q6ZTR6 163 aa14.15□□□□□ -0.14
SCARB1-201ENST00000261693 DUX3Q96PT4 197 aa14.14□□□□□ -0.15
SCARB1-201ENST00000261693 SLURP1P55000 103 aa14.13□□□□□ -0.15
SCARB1-201ENST00000261693 ADAMTSL4-AS1Q5T5F5 129 aa14.13□□□□□ -0.15
SCARB1-201ENST00000261693 NOTCH3Q9UM47 2321 aa14.13□□□□□ -0.15
SCARB1-201ENST00000261693 TEX15Q9BXT5 2789 aa14.13□□□□□ -0.15
SCARB1-201ENST00000261693 PIEZO1Q92508 2521 aa14.12□□□□□ -0.15
SCARB1-201ENST00000261693 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.12□□□□□ -0.15
SCARB1-201ENST00000261693 IGKV2-29A2NJV5 120 aaPredicted RBP14.12□□□□□ -0.15
SCARB1-201ENST00000261693 MRPS36P82909 103 aaKnown RBP14.12□□□□□ -0.15
SCARB1-201ENST00000261693 LITAFQ99732 161 aa14.12□□□□□ -0.15
SCARB1-201ENST00000261693 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.12□□□□□ -0.15
SCARB1-201ENST00000261693 PYGO1Q9Y3Y4 419 aa14.12□□□□□ -0.15
SCARB1-201ENST00000261693 FBN2P35556 2912 aa14.12□□□□□ -0.15
SCARB1-201ENST00000261693 IGHV3-38A0A0C4DH36 116 aa14.11□□□□□ -0.15
SCARB1-201ENST00000261693 TMEM89A2RUT3 159 aa14.11□□□□□ -0.15
SCARB1-201ENST00000261693 RBMY1BA6NDE4 496 aaKnown RBP14.11□□□□□ -0.15
SCARB1-201ENST00000261693 RBMY1EA6NEQ0 496 aaKnown RBP14.11□□□□□ -0.15
SCARB1-201ENST00000261693 RBMY1DP0C7P1 496 aaKnown RBP14.11□□□□□ -0.15
SCARB1-201ENST00000261693 GATA3P23771 443 aa14.11□□□□□ -0.15
SCARB1-201ENST00000261693 GEMIN7Q9H840 131 aaKnown RBP14.11□□□□□ -0.15
SCARB1-201ENST00000261693 LINC01356Q8N9X3 169 aa14.11□□□□□ -0.15
SCARB1-201ENST00000261693 HIST2H2BDQ6DRA6 164 aa14.11□□□□□ -0.15
SCARB1-201ENST00000261693 Q6ZSV7 163 aa14.11□□□□□ -0.15
SCARB1-201ENST00000261693 WNK1Q9H4A3 2382 aa14.1□□□□□ -0.15
SCARB1-201ENST00000261693 TRIAP1O43715 76 aa14.1□□□□□ -0.15
SCARB1-201ENST00000261693 NDUFA12Q9UI09 145 aa14.1□□□□□ -0.15
SCARB1-201ENST00000261693 TLN2Q9Y4G6 2542 aa14.1□□□□□ -0.15
SCARB1-201ENST00000261693 IGHV1-58A0A0C4DH39 117 aa14.09□□□□□ -0.15
SCARB1-201ENST00000261693 UBE2E2Q96LR5 201 aa14.09□□□□□ -0.15
SCARB1-201ENST00000261693 CHCHD7Q9BUK0 85 aa14.09□□□□□ -0.15
SCARB1-201ENST00000261693 ZNF702PQ9H963 129 aa14.09□□□□□ -0.15
SCARB1-201ENST00000261693 VPREB3Q9UKI3 123 aa14.09□□□□□ -0.15
SCARB1-201ENST00000261693 CHD6Q8TD26 2715 aa14.09□□□□□ -0.15
SCARB1-201ENST00000261693 H3BMM0 161 aa14.09□□□□□ -0.15
SCARB1-201ENST00000261693 ATXN8Q156A1 80 aa14.09□□□□□ -0.15
SCARB1-201ENST00000261693 NTN5Q8WTR8 489 aaPredicted RBP14.09□□□□□ -0.15
SCARB1-201ENST00000261693 RNF152Q8N8N0 203 aa14.08□□□□□ -0.16
SCARB1-201ENST00000261693 ABCA12Q86UK0 2595 aa14.08□□□□□ -0.16
SCARB1-201ENST00000261693 LRRK2Q5S007 2527 aa14.08□□□□□ -0.16
SCARB1-201ENST00000261693 LINC01620Q4KN68 170 aa14.08□□□□□ -0.16
SCARB1-201ENST00000261693 LINC00467Q9BRT7 94 aa14.08□□□□□ -0.16
SCARB1-201ENST00000261693 UBE2D4Q9Y2X8 147 aa14.08□□□□□ -0.16
SCARB1-201ENST00000261693 PTPN13Q12923 2485 aa14.07□□□□□ -0.16
SCARB1-201ENST00000261693 VSIG2Q96IQ7 327 aa14.07□□□□□ -0.16
SCARB1-201ENST00000261693 DAND5Q8N907 189 aa14.06□□□□□ -0.16
SCARB1-201ENST00000261693 TRAV26-1A0A087WT03 109 aa14.06□□□□□ -0.16
SCARB1-201ENST00000261693 TEX49A0A1B0GTD5 131 aa14.06□□□□□ -0.16
SCARB1-201ENST00000261693 TMEM61Q8N0U2 210 aa14.06□□□□□ -0.16
SCARB1-201ENST00000261693 EDA2RQ9HAV5 297 aa14.06□□□□□ -0.16
SCARB1-201ENST00000261693 C2CD3Q4AC94 2353 aa14.05□□□□□ -0.16
SCARB1-201ENST00000261693 ZFYVE26Q68DK2 2539 aa14.05□□□□□ -0.16
SCARB1-201ENST00000261693 TINCRA0A1B0GVN0 87 aa14.05□□□□□ -0.16
SCARB1-201ENST00000261693 LINC01587Q99440 93 aa14.05□□□□□ -0.16
SCARB1-201ENST00000261693 TRBV30A0A0K0K1B3 111 aa14.04□□□□□ -0.16
SCARB1-201ENST00000261693 ZNF415Q09FC8 603 aa14.04□□□□□ -0.16
SCARB1-201ENST00000261693 ICOSQ9Y6W8 199 aa14.04□□□□□ -0.16
SCARB1-201ENST00000261693 TMEM262E9PQX1 116 aa14.03□□□□□ -0.16
SCARB1-201ENST00000261693 KHDC1LQ5JSQ8 128 aa14.03□□□□□ -0.16
SCARB1-201ENST00000261693 EPG5Q9HCE0 2579 aa14.03□□□□□ -0.16
SCARB1-201ENST00000261693 DSCR9P59020 149 aa14.03□□□□□ -0.16
SCARB1-201ENST00000261693 MIAQ16674 131 aa14.03□□□□□ -0.16
SCARB1-201ENST00000261693 Q5PR19 223 aa14.03□□□□□ -0.16
SCARB1-201ENST00000261693 SPANXA1Q9NS26 97 aa14.03□□□□□ -0.16
SCARB1-201ENST00000261693 CDKN2A-AS1Q9UH64 79 aa14.02□□□□□ -0.16
SCARB1-201ENST00000261693 A0A096LNT2 108 aa14.02□□□□□ -0.17
SCARB1-201ENST00000261693 Q6YL49 198 aa14.02□□□□□ -0.17
SCARB1-201ENST00000261693 SPANXDQ9BXN6 97 aa14.02□□□□□ -0.17
SCARB1-201ENST00000261693 SPANXCQ9NY87 97 aa14.02□□□□□ -0.17
SCARB1-201ENST00000261693 CLEC2BQ92478 149 aa14.01□□□□□ -0.17
SCARB1-201ENST00000261693 M0QXV9 152 aa14.01□□□□□ -0.17
SCARB1-201ENST00000261693 CLUHP3Q96NS8 147 aa14.01□□□□□ -0.17
SCARB1-201ENST00000261693 NF1P21359 2839 aa14.01□□□□□ -0.17
SCARB1-201ENST00000261693 NAV2Q8IVL1 2488 aa14□□□□□ -0.17
SCARB1-201ENST00000261693 C11orf72Q8NBR9 251 aa14□□□□□ -0.17
SCARB1-201ENST00000261693 SONP18583 2426 aaKnown RBP14□□□□□ -0.17
SCARB1-201ENST00000261693 SETD2Q9BYW2 2564 aaPredicted RBP14□□□□□ -0.17
SCARB1-201ENST00000261693 TRBV10-2A0A0K0K1G8 114 aa14□□□□□ -0.17
SCARB1-201ENST00000261693 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14□□□□□ -0.17
SCARB1-201ENST00000261693 MAP6D1Q9H9H5 199 aa14□□□□□ -0.17
SCARB1-201ENST00000261693 AKAP9Q99996 3911 aa14□□□□□ -0.17
SCARB1-201ENST00000261693 RNF183Q96D59 192 aa13.99□□□□□ -0.17
SCARB1-201ENST00000261693 J3QLI3 93 aa13.99□□□□□ -0.17
SCARB1-201ENST00000261693 ZFAND6Q6FIF0 208 aa13.99□□□□□ -0.17
SCARB1-201ENST00000261693 IGHV3-53P01767 116 aa13.98□□□□□ -0.17
SCARB1-201ENST00000261693 C2orf82Q6UX34 121 aa13.98□□□□□ -0.17
SCARB1-201ENST00000261693 ZNF469Q96JG9 3925 aaPredicted RBP13.98□□□□□ -0.17
SCARB1-201ENST00000261693 IGHV3OR16-12A0A075B7B8 117 aa13.98□□□□□ -0.17
SCARB1-201ENST00000261693 A8MTW9 85 aa13.98□□□□□ -0.17
SCARB1-201ENST00000261693 H7C423 109 aa13.98□□□□□ -0.17
SCARB1-201ENST00000261693 CRLF1O75462 422 aa13.98□□□□□ -0.17
SCARB1-201ENST00000261693 TEX29Q8N6K0 151 aa13.98□□□□□ -0.17
SCARB1-201ENST00000261693 NIPBLQ6KC79 2804 aaeCLIP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms