RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 H7C2G1 150 aa7.97□□□□□ -1.13
CHRNA1-201ENST00000261007 COX6CP09669 75 aa7.97□□□□□ -1.13
CHRNA1-201ENST00000261007 F5H697 171 aa7.97□□□□□ -1.13
CHRNA1-201ENST00000261007 K7EQG2 157 aa7.97□□□□□ -1.13
CHRNA1-201ENST00000261007 SPANXCQ9NY87 97 aa7.97□□□□□ -1.13
CHRNA1-201ENST00000261007 IGKV3-7A0A075B6H7 116 aa7.96□□□□□ -1.14
CHRNA1-201ENST00000261007 H7C423 109 aa7.96□□□□□ -1.14
CHRNA1-201ENST00000261007 C20orf203Q8NBC4 194 aa7.96□□□□□ -1.14
CHRNA1-201ENST00000261007 TMEM126AQ9H061 195 aa7.96□□□□□ -1.14
CHRNA1-201ENST00000261007 ICOSQ9Y6W8 199 aa7.96□□□□□ -1.14
CHRNA1-201ENST00000261007 USP9XQ93008 2570 aaPredicted RBP7.96□□□□□ -1.14
CHRNA1-201ENST00000261007 TRBV7-7A0A0K0K1E9 115 aa7.95□□□□□ -1.14
CHRNA1-201ENST00000261007 M0QY20 66 aa7.95□□□□□ -1.14
CHRNA1-201ENST00000261007 HOXD3P31249 432 aaPredicted RBP7.95□□□□□ -1.14
CHRNA1-201ENST00000261007 LITAFQ99732 161 aa7.95□□□□□ -1.14
CHRNA1-201ENST00000261007 A0A087WWL8 130 aa7.95□□□□□ -1.14
CHRNA1-201ENST00000261007 F6UB75 175 aa7.95□□□□□ -1.14
CHRNA1-201ENST00000261007 SYNJ2BPP57105 145 aa7.95□□□□□ -1.14
CHRNA1-201ENST00000261007 HERV-K104P63124 156 aa7.95□□□□□ -1.14
CHRNA1-201ENST00000261007 C10orf99Q6UWK7 81 aa7.95□□□□□ -1.14
CHRNA1-201ENST00000261007 KRTAP1-3Q8IUG1 177 aa7.95□□□□□ -1.14
CHRNA1-201ENST00000261007 C9orf85Q96MD7 179 aa7.95□□□□□ -1.14
CHRNA1-201ENST00000261007 JPT2Q9H910 190 aa7.95□□□□□ -1.14
CHRNA1-201ENST00000261007 PEMTQ9UBM1 199 aa7.95□□□□□ -1.14
CHRNA1-201ENST00000261007 SPG11Q96JI7 2443 aa7.95□□□□□ -1.14
CHRNA1-201ENST00000261007 IGLV4-3A0A075B6K6 122 aa7.94□□□□□ -1.14
CHRNA1-201ENST00000261007 I3L3M4 83 aa7.94□□□□□ -1.14
CHRNA1-201ENST00000261007 MEIG1Q5JSS6 88 aa7.94□□□□□ -1.14
CHRNA1-201ENST00000261007 SMIM20Q8N5G0 67 aa7.94□□□□□ -1.14
CHRNA1-201ENST00000261007 IMUPQ9GZP8 106 aa7.94□□□□□ -1.14
CHRNA1-201ENST00000261007 ZNF256Q9Y2P7 627 aaPredicted RBP7.94□□□□□ -1.14
CHRNA1-201ENST00000261007 PYGO1Q9Y3Y4 419 aa7.94□□□□□ -1.14
CHRNA1-201ENST00000261007 USP24Q9UPU5 2620 aa7.94□□□□□ -1.14
CHRNA1-201ENST00000261007 CFAP46Q8IYW2 2715 aa7.94□□□□□ -1.14
CHRNA1-201ENST00000261007 A0A0J9YXV3 536 aa7.93□□□□□ -1.14
CHRNA1-201ENST00000261007 LST1O00453 97 aa7.93□□□□□ -1.14
CHRNA1-201ENST00000261007 ACYP1P07311 99 aa7.93□□□□□ -1.14
CHRNA1-201ENST00000261007 IGHV3-30-3P0DP02 117 aa7.93□□□□□ -1.14
CHRNA1-201ENST00000261007 C4orf3Q8WVX3 66 aa7.93□□□□□ -1.14
CHRNA1-201ENST00000261007 TIMM21Q9BVV7 248 aa7.93□□□□□ -1.14
CHRNA1-201ENST00000261007 YAE1D1Q9NRH1 226 aa7.93□□□□□ -1.14
CHRNA1-201ENST00000261007 MUC4Q99102 2169 aa7.93□□□□□ -1.14
CHRNA1-201ENST00000261007 DEFB1P60022 68 aa7.93□□□□□ -1.14
CHRNA1-201ENST00000261007 MRPS36P82909 103 aaKnown RBP7.93□□□□□ -1.14
CHRNA1-201ENST00000261007 OPRPNQ99935 248 aaPredicted RBP7.93□□□□□ -1.14
CHRNA1-201ENST00000261007 IGHV3-16A0A0C4DH30 117 aa7.92□□□□□ -1.14
CHRNA1-201ENST00000261007 MIAQ16674 131 aa7.92□□□□□ -1.14
CHRNA1-201ENST00000261007 SHISA2Q6UWI4 295 aa7.92□□□□□ -1.14
CHRNA1-201ENST00000261007 IGHV1-58A0A0C4DH39 117 aa7.91□□□□□ -1.14
CHRNA1-201ENST00000261007 TIMM17BO60830 172 aa7.91□□□□□ -1.14
CHRNA1-201ENST00000261007 EDN2P20800 178 aa7.91□□□□□ -1.14
CHRNA1-201ENST00000261007 ZNF56Q15929 161 aa7.91□□□□□ -1.14
CHRNA1-201ENST00000261007 DEFB104AQ8WTQ1 72 aa7.91□□□□□ -1.14
CHRNA1-201ENST00000261007 TMEM101Q96IK0 257 aa7.91□□□□□ -1.14
CHRNA1-201ENST00000261007 IGHV3-64A0A075B6Q5 118 aa7.91□□□□□ -1.14
CHRNA1-201ENST00000261007 EDA2RQ9HAV5 297 aa7.91□□□□□ -1.14
CHRNA1-201ENST00000261007 CSPG4Q6UVK1 2322 aa7.91□□□□□ -1.14
CHRNA1-201ENST00000261007 ANKRD17O75179 2603 aaKnown RBP7.9□□□□□ -1.14
CHRNA1-201ENST00000261007 PRSS2P07478 247 aa7.9□□□□□ -1.14
CHRNA1-201ENST00000261007 FAM74A4Q5TZK3 123 aa7.9□□□□□ -1.14
CHRNA1-201ENST00000261007 ZNF462Q96JM2 2506 aa7.9□□□□□ -1.15
CHRNA1-201ENST00000261007 TRGV11A0A075B6L2 103 aa7.9□□□□□ -1.15
CHRNA1-201ENST00000261007 TMEM61Q8N0U2 210 aa7.9□□□□□ -1.15
CHRNA1-201ENST00000261007 SPXQ9BT56 116 aa7.9□□□□□ -1.15
CHRNA1-201ENST00000261007 NDUFA12Q9UI09 145 aa7.9□□□□□ -1.15
CHRNA1-201ENST00000261007 TNFRSF18Q9Y5U5 241 aa7.9□□□□□ -1.15
CHRNA1-201ENST00000261007 IGHV1OR15-1A0A075B7D0 117 aa7.89□□□□□ -1.15
CHRNA1-201ENST00000261007 TRAV12-3A0A0B4J271 114 aa7.89□□□□□ -1.15
CHRNA1-201ENST00000261007 A8MTW9 85 aa7.89□□□□□ -1.15
CHRNA1-201ENST00000261007 J3QKU1 62 aa7.89□□□□□ -1.15
CHRNA1-201ENST00000261007 ADAMTSL4-AS1Q5T5F5 129 aa7.89□□□□□ -1.15
CHRNA1-201ENST00000261007 DUX3Q96PT4 197 aa7.89□□□□□ -1.15
CHRNA1-201ENST00000261007 LINC01587Q99440 93 aa7.89□□□□□ -1.15
CHRNA1-201ENST00000261007 TINCRA0A1B0GVN0 87 aa7.88□□□□□ -1.15
CHRNA1-201ENST00000261007 VSIG2Q96IQ7 327 aa7.88□□□□□ -1.15
CHRNA1-201ENST00000261007 DUX5Q96PT3 197 aa7.88□□□□□ -1.15
CHRNA1-201ENST00000261007 CHCHD5Q9BSY4 110 aa7.88□□□□□ -1.15
CHRNA1-201ENST00000261007 FAM208BQ5VWN6 2430 aa7.88□□□□□ -1.15
CHRNA1-201ENST00000261007 MYO18BQ8IUG5 2567 aa7.88□□□□□ -1.15
CHRNA1-201ENST00000261007 ATP5G1P05496 136 aa7.88□□□□□ -1.15
CHRNA1-201ENST00000261007 CD28P10747 220 aa7.88□□□□□ -1.15
CHRNA1-201ENST00000261007 SLURP1P55000 103 aa7.88□□□□□ -1.15
CHRNA1-201ENST00000261007 DYNLRB2Q8TF09 96 aa7.88□□□□□ -1.15
CHRNA1-201ENST00000261007 CLEC2BQ92478 149 aa7.88□□□□□ -1.15
CHRNA1-201ENST00000261007 WFDC11Q8NEX6 87 aa7.87□□□□□ -1.15
CHRNA1-201ENST00000261007 FAM104AQ969W3 186 aa7.87□□□□□ -1.15
CHRNA1-201ENST00000261007 UBR5O95071 2799 aaPredicted RBP7.87□□□□□ -1.15
CHRNA1-201ENST00000261007 TRAV25A0A0B4J276 109 aa7.86□□□□□ -1.15
CHRNA1-201ENST00000261007 DNAJC9-AS1A6NH13 148 aa7.86□□□□□ -1.15
CHRNA1-201ENST00000261007 ADARB2-AS1A8MUL3 147 aa7.86□□□□□ -1.15
CHRNA1-201ENST00000261007 PLA2G2AP14555 144 aa7.86□□□□□ -1.15
CHRNA1-201ENST00000261007 KHDC1LQ5JSQ8 128 aa7.86□□□□□ -1.15
CHRNA1-201ENST00000261007 Q6ZSV7 163 aa7.86□□□□□ -1.15
CHRNA1-201ENST00000261007 COL12A1Q99715 3063 aa7.86□□□□□ -1.15
CHRNA1-201ENST00000261007 TRAV8-3A0A0A6YYJ7 113 aa7.86□□□□□ -1.15
CHRNA1-201ENST00000261007 SPINK13Q1W4C9 94 aa7.86□□□□□ -1.15
CHRNA1-201ENST00000261007 LINC00643Q86TS7 51 aa7.86□□□□□ -1.15
CHRNA1-201ENST00000261007 FLNCQ14315 2725 aa7.85□□□□□ -1.15
CHRNA1-201ENST00000261007 PIK3CD-AS1Q5SR53 167 aa7.85□□□□□ -1.15
CHRNA1-201ENST00000261007 IGKV3-20P01619 116 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms