RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 MUSTN1Q8IVN3 82 aa11.11□□□□□ -0.63
DDX56-201ENST00000258772 SCGB1C2P0DMR2 95 aa11.1□□□□□ -0.63
DDX56-201ENST00000258772 IGHV3-30-3P0DP02 117 aa11.1□□□□□ -0.63
DDX56-201ENST00000258772 SCGB1A1P11684 91 aa11.1□□□□□ -0.63
DDX56-201ENST00000258772 Q6ZSN1 163 aa11.1□□□□□ -0.63
DDX56-201ENST00000258772 PEMTQ9UBM1 199 aa11.1□□□□□ -0.63
DDX56-201ENST00000258772 ZNF415Q09FC8 603 aa11.1□□□□□ -0.63
DDX56-201ENST00000258772 Q8N2B8 174 aa11.1□□□□□ -0.63
DDX56-201ENST00000258772 PTH2Q96A98 100 aa11.1□□□□□ -0.63
DDX56-201ENST00000258772 FBN2P35556 2912 aa11.1□□□□□ -0.63
DDX56-201ENST00000258772 A0A0J9YXY3 114 aa11.09□□□□□ -0.63
DDX56-201ENST00000258772 IGHV3-33P01772 117 aa11.09□□□□□ -0.63
DDX56-201ENST00000258772 TMEM263Q8WUH6 116 aaKnown RBP11.09□□□□□ -0.63
DDX56-201ENST00000258772 RAX2Q96IS3 184 aa11.09□□□□□ -0.63
DDX56-201ENST00000258772 TIMM21Q9BVV7 248 aa11.09□□□□□ -0.63
DDX56-201ENST00000258772 A0A0B4J2C4 111 aa11.08□□□□□ -0.64
DDX56-201ENST00000258772 RNASE13Q5GAN3 156 aaKnown RBP11.08□□□□□ -0.64
DDX56-201ENST00000258772 SBSPONQ8IVN8 264 aa11.08□□□□□ -0.64
DDX56-201ENST00000258772 CHCHD7Q9BUK0 85 aa11.08□□□□□ -0.64
DDX56-201ENST00000258772 CENPEQ02224 2701 aa11.08□□□□□ -0.64
DDX56-201ENST00000258772 PTPN13Q12923 2485 aa11.08□□□□□ -0.64
DDX56-201ENST00000258772 TEN1Q86WV5 123 aa11.08□□□□□ -0.64
DDX56-201ENST00000258772 C11orf72Q8NBR9 251 aa11.08□□□□□ -0.64
DDX56-201ENST00000258772 LINC01587Q99440 93 aa11.08□□□□□ -0.64
DDX56-201ENST00000258772 MAP6D1Q9H9H5 199 aa11.08□□□□□ -0.64
DDX56-201ENST00000258772 TRAV8-3A0A0A6YYJ7 113 aa11.07□□□□□ -0.64
DDX56-201ENST00000258772 C4orf3Q8WVX3 66 aa11.07□□□□□ -0.64
DDX56-201ENST00000258772 ERG28Q9UKR5 140 aa11.07□□□□□ -0.64
DDX56-201ENST00000258772 ADARB2-AS1A8MUL3 147 aa11.07□□□□□ -0.64
DDX56-201ENST00000258772 SPANXA1Q9NS26 97 aa11.07□□□□□ -0.64
DDX56-201ENST00000258772 UBE2D4Q9Y2X8 147 aa11.07□□□□□ -0.64
DDX56-201ENST00000258772 TEX15Q9BXT5 2789 aa11.06□□□□□ -0.64
DDX56-201ENST00000258772 MYO9AB2RTY4 2548 aa11.06□□□□□ -0.64
DDX56-201ENST00000258772 IGHV1-58A0A0C4DH39 117 aa11.06□□□□□ -0.64
DDX56-201ENST00000258772 PRB1P04280 392 aa11.06□□□□□ -0.64
DDX56-201ENST00000258772 KRTAP10-9P60411 292 aa11.06□□□□□ -0.64
DDX56-201ENST00000258772 CARD19Q96LW7 228 aa11.06□□□□□ -0.64
DDX56-201ENST00000258772 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.06□□□□□ -0.64
DDX56-201ENST00000258772 TINCRA0A1B0GVN0 87 aa11.06□□□□□ -0.64
DDX56-201ENST00000258772 IGHV3-53P01767 116 aa11.06□□□□□ -0.64
DDX56-201ENST00000258772 DEFB114Q30KQ6 69 aa11.06□□□□□ -0.64
DDX56-201ENST00000258772 KHDC1LQ5JSQ8 128 aa11.06□□□□□ -0.64
DDX56-201ENST00000258772 DYNLRB2Q8TF09 96 aa11.06□□□□□ -0.64
DDX56-201ENST00000258772 PPDPFLQ8WWR9 84 aa11.06□□□□□ -0.64
DDX56-201ENST00000258772 LITAFQ99732 161 aa11.06□□□□□ -0.64
DDX56-201ENST00000258772 LINC00467Q9BRT7 94 aa11.06□□□□□ -0.64
DDX56-201ENST00000258772 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.05□□□□□ -0.64
DDX56-201ENST00000258772 IGKV2-29A2NJV5 120 aaPredicted RBP11.05□□□□□ -0.64
DDX56-201ENST00000258772 BEAN1Q3B7T3 259 aa11.05□□□□□ -0.64
DDX56-201ENST00000258772 LRRK2Q5S007 2527 aa11.05□□□□□ -0.64
DDX56-201ENST00000258772 H7C2G1 150 aa11.04□□□□□ -0.64
DDX56-201ENST00000258772 DNAJC30Q96LL9 226 aa11.04□□□□□ -0.64
DDX56-201ENST00000258772 SHISA2Q6UWI4 295 aa11.04□□□□□ -0.64
DDX56-201ENST00000258772 CDIP1Q9H305 208 aa11.04□□□□□ -0.64
DDX56-201ENST00000258772 IGHV3-38A0A0C4DH36 116 aa11.03□□□□□ -0.64
DDX56-201ENST00000258772 INSP01308 110 aa11.03□□□□□ -0.64
DDX56-201ENST00000258772 HIST2H2BDQ6DRA6 164 aa11.03□□□□□ -0.64
DDX56-201ENST00000258772 VSIG2Q96IQ7 327 aa11.03□□□□□ -0.64
DDX56-201ENST00000258772 NDUFA12Q9UI09 145 aa11.03□□□□□ -0.64
DDX56-201ENST00000258772 ZNF462Q96JM2 2506 aa11.03□□□□□ -0.64
DDX56-201ENST00000258772 NAV2Q8IVL1 2488 aa11.03□□□□□ -0.64
DDX56-201ENST00000258772 RS1O15537 224 aa11.02□□□□□ -0.64
DDX56-201ENST00000258772 PRSS2P07478 247 aa11.02□□□□□ -0.64
DDX56-201ENST00000258772 DEFB113Q30KQ7 82 aa11.02□□□□□ -0.64
DDX56-201ENST00000258772 ADAMTSL4-AS1Q5T5F5 129 aa11.02□□□□□ -0.64
DDX56-201ENST00000258772 Q6ZUT4 128 aa11.02□□□□□ -0.64
DDX56-201ENST00000258772 A8MZ25 164 aa11.02□□□□□ -0.65
DDX56-201ENST00000258772 SPINK8P0C7L1 97 aa11.02□□□□□ -0.65
DDX56-201ENST00000258772 FHL3Q13643 280 aa11.02□□□□□ -0.65
DDX56-201ENST00000258772 ANKRD29Q8N6D5 301 aa11.02□□□□□ -0.65
DDX56-201ENST00000258772 CITED2Q99967 270 aaPredicted RBP11.02□□□□□ -0.65
DDX56-201ENST00000258772 ZFYVE26Q68DK2 2539 aa11.02□□□□□ -0.65
DDX56-201ENST00000258772 SLC25A20O43772 301 aa11.01□□□□□ -0.65
DDX56-201ENST00000258772 Q1RN00 199 aa11.01□□□□□ -0.65
DDX56-201ENST00000258772 ABCA12Q86UK0 2595 aa11.01□□□□□ -0.65
DDX56-201ENST00000258772 SPANXDQ9BXN6 97 aa11.01□□□□□ -0.65
DDX56-201ENST00000258772 SPANXCQ9NY87 97 aa11.01□□□□□ -0.65
DDX56-201ENST00000258772 XCL2Q9UBD3 114 aa11.01□□□□□ -0.65
DDX56-201ENST00000258772 C9JAW5 83 aa11□□□□□ -0.65
DDX56-201ENST00000258772 GEMIN7Q9H840 131 aaKnown RBP11□□□□□ -0.65
DDX56-201ENST00000258772 WNK1Q9H4A3 2382 aa11□□□□□ -0.65
DDX56-201ENST00000258772 M0QXV9 152 aa11□□□□□ -0.65
DDX56-201ENST00000258772 Q96MF0 132 aa11□□□□□ -0.65
DDX56-201ENST00000258772 ODF3L2Q3SX64 289 aa10.99□□□□□ -0.65
DDX56-201ENST00000258772 TRBV30A0A0K0K1B3 111 aa10.98□□□□□ -0.65
DDX56-201ENST00000258772 ZFAND6Q6FIF0 208 aa10.98□□□□□ -0.65
DDX56-201ENST00000258772 LRRC75A-AS1Q8N1F1 130 aa10.98□□□□□ -0.65
DDX56-201ENST00000258772 BBC3Q96PG8 261 aaPredicted RBP10.98□□□□□ -0.65
DDX56-201ENST00000258772 TLN2Q9Y4G6 2542 aa10.98□□□□□ -0.65
DDX56-201ENST00000258772 TIRAPP58753 221 aa10.98□□□□□ -0.65
DDX56-201ENST00000258772 ATXN8Q156A1 80 aa10.98□□□□□ -0.65
DDX56-201ENST00000258772 MIAQ16674 131 aa10.98□□□□□ -0.65
DDX56-201ENST00000258772 CDKN2A-AS1Q9UH64 79 aa10.98□□□□□ -0.65
DDX56-201ENST00000258772 AKAP9Q99996 3911 aa10.98□□□□□ -0.65
DDX56-201ENST00000258772 Q6ZSV7 163 aa10.97□□□□□ -0.65
DDX56-201ENST00000258772 TRIAP1O43715 76 aa10.97□□□□□ -0.65
DDX56-201ENST00000258772 DGAT2L7PQ6IED9 249 aa10.97□□□□□ -0.65
DDX56-201ENST00000258772 C1orf158Q8N1D5 194 aa10.97□□□□□ -0.65
DDX56-201ENST00000258772 IGHV3OR16-12A0A075B7B8 117 aa10.96□□□□□ -0.65
DDX56-201ENST00000258772 IGLV5-45A0A087WSX0 123 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms