RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 K7EMT4 169 aa8.45□□□□□ -1.06
TROAP-201ENST00000257909 UQCRQO14949 82 aa8.45□□□□□ -1.06
TROAP-201ENST00000257909 C9orf153Q5TBE3 101 aa8.45□□□□□ -1.06
TROAP-201ENST00000257909 CIRBPQ14011 172 aaKnown RBP8.44□□□□□ -1.06
TROAP-201ENST00000257909 TRAV12-2A0A075B6T6 113 aa8.44□□□□□ -1.06
TROAP-201ENST00000257909 COX7A2LO14548 114 aa8.44□□□□□ -1.06
TROAP-201ENST00000257909 NDUFA7O95182 113 aa8.43□□□□□ -1.06
TROAP-201ENST00000257909 C3orf56Q8N813 242 aa8.43□□□□□ -1.06
TROAP-201ENST00000257909 NDUFA1O15239 70 aa8.43□□□□□ -1.06
TROAP-201ENST00000257909 CXCL5P42830 114 aa8.43□□□□□ -1.06
TROAP-201ENST00000257909 COPS9Q8WXC6 57 aa8.43□□□□□ -1.06
TROAP-201ENST00000257909 IGHG2P01859 326 aa8.42□□□□□ -1.06
TROAP-201ENST00000257909 CEMP1Q6PRD7 247 aaPredicted RBP8.42□□□□□ -1.06
TROAP-201ENST00000257909 SDIM1Q6ZPB5 146 aa8.42□□□□□ -1.06
TROAP-201ENST00000257909 LINC00526Q96FQ7 95 aa8.42□□□□□ -1.06
TROAP-201ENST00000257909 A8MZ25 164 aa8.42□□□□□ -1.06
TROAP-201ENST00000257909 CCL21O00585 134 aa8.42□□□□□ -1.06
TROAP-201ENST00000257909 SNRPD3P62318 126 aaKnown RBP8.42□□□□□ -1.06
TROAP-201ENST00000257909 DUX5Q96PT3 197 aa8.42□□□□□ -1.06
TROAP-201ENST00000257909 CEP295Q9C0D2 2601 aa8.42□□□□□ -1.06
TROAP-201ENST00000257909 NBASA2RRP1 2371 aa8.41□□□□□ -1.06
TROAP-201ENST00000257909 LMO4P61968 165 aa8.41□□□□□ -1.06
TROAP-201ENST00000257909 RNASE13Q5GAN3 156 aaKnown RBP8.41□□□□□ -1.06
TROAP-201ENST00000257909 SMCR5Q8TEV8 140 aa8.41□□□□□ -1.06
TROAP-201ENST00000257909 PEMTQ9UBM1 199 aa8.41□□□□□ -1.06
TROAP-201ENST00000257909 UBE2D4Q9Y2X8 147 aa8.41□□□□□ -1.06
TROAP-201ENST00000257909 IGKV3-20P01619 116 aa8.41□□□□□ -1.06
TROAP-201ENST00000257909 TRACP01848 142 aa8.41□□□□□ -1.06
TROAP-201ENST00000257909 LINC00694P0DN24 101 aa8.41□□□□□ -1.06
TROAP-201ENST00000257909 DAND5Q8N907 189 aa8.4□□□□□ -1.06
TROAP-201ENST00000257909 LINC00308Q8TCZ7 52 aa8.4□□□□□ -1.06
TROAP-201ENST00000257909 TIRAPP58753 221 aa8.4□□□□□ -1.07
TROAP-201ENST00000257909 DAZ2Q13117 558 aaKnown RBP8.4□□□□□ -1.07
TROAP-201ENST00000257909 SPINK13Q1W4C9 94 aa8.4□□□□□ -1.07
TROAP-201ENST00000257909 DAZ4Q86SG3 579 aaKnown RBP8.4□□□□□ -1.07
TROAP-201ENST00000257909 DAZ3Q9NR90 486 aaKnown RBP8.4□□□□□ -1.07
TROAP-201ENST00000257909 CELSR1Q9NYQ6 3014 aa8.4□□□□□ -1.07
TROAP-201ENST00000257909 IGLV5-45A0A087WSX0 123 aa8.39□□□□□ -1.07
TROAP-201ENST00000257909 C5orf38Q86SI9 138 aa8.39□□□□□ -1.07
TROAP-201ENST00000257909 CHCHD7Q9BUK0 85 aa8.39□□□□□ -1.07
TROAP-201ENST00000257909 UBTD1Q9HAC8 227 aa8.39□□□□□ -1.07
TROAP-201ENST00000257909 IGLV1-40P01703 118 aa8.39□□□□□ -1.07
TROAP-201ENST00000257909 EDN2P20800 178 aa8.39□□□□□ -1.07
TROAP-201ENST00000257909 HERVK_113P63121 156 aa8.39□□□□□ -1.07
TROAP-201ENST00000257909 LRRC75A-AS1Q8N1F1 130 aa8.39□□□□□ -1.07
TROAP-201ENST00000257909 RNF152Q8N8N0 203 aa8.39□□□□□ -1.07
TROAP-201ENST00000257909 INAFM2P0DMQ5 153 aa8.38□□□□□ -1.07
TROAP-201ENST00000257909 COX7CP15954 63 aa8.38□□□□□ -1.07
TROAP-201ENST00000257909 FAM222AQ5U5X8 452 aa8.38□□□□□ -1.07
TROAP-201ENST00000257909 BPESC1Q9GZL8 116 aa8.38□□□□□ -1.07
TROAP-201ENST00000257909 CDKN2A-AS1Q9UH64 79 aa8.38□□□□□ -1.07
TROAP-201ENST00000257909 A0A1B0GX51 115 aa8.38□□□□□ -1.07
TROAP-201ENST00000257909 A0A1W2PPR1 153 aa8.38□□□□□ -1.07
TROAP-201ENST00000257909 BAALC-AS2P0C853 105 aa8.38□□□□□ -1.07
TROAP-201ENST00000257909 ADORA2A-AS1P86434 159 aa8.38□□□□□ -1.07
TROAP-201ENST00000257909 MUC6Q6W4X9 2439 aa8.38□□□□□ -1.07
TROAP-201ENST00000257909 IGHV3OR16-10A0A075B7F0 116 aa8.37□□□□□ -1.07
TROAP-201ENST00000257909 IGHV3-73A0A0B4J1V6 119 aa8.37□□□□□ -1.07
TROAP-201ENST00000257909 BEAN1Q3B7T3 259 aa8.37□□□□□ -1.07
TROAP-201ENST00000257909 ABCA2Q9BZC7 2435 aa8.37□□□□□ -1.07
TROAP-201ENST00000257909 J3KT08 172 aa8.37□□□□□ -1.07
TROAP-201ENST00000257909 K7EQG2 157 aa8.37□□□□□ -1.07
TROAP-201ENST00000257909 PRORYQ9H606 182 aa8.37□□□□□ -1.07
TROAP-201ENST00000257909 SPTA1P02549 2419 aa8.37□□□□□ -1.07
TROAP-201ENST00000257909 SPTBN1Q01082 2364 aaKnown RBP8.37□□□□□ -1.07
TROAP-201ENST00000257909 VPS13CQ709C8 3753 aa8.36□□□□□ -1.07
TROAP-201ENST00000257909 PTPRZ1P23471 2315 aaPredicted RBP8.36□□□□□ -1.07
TROAP-201ENST00000257909 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.36□□□□□ -1.07
TROAP-201ENST00000257909 IGKV2-29A2NJV5 120 aaPredicted RBP8.36□□□□□ -1.07
TROAP-201ENST00000257909 K7ENP7 123 aa8.36□□□□□ -1.07
TROAP-201ENST00000257909 PROK1P58294 105 aa8.36□□□□□ -1.07
TROAP-201ENST00000257909 LY6EQ16553 131 aa8.36□□□□□ -1.07
TROAP-201ENST00000257909 Q9H8V8 135 aa8.36□□□□□ -1.07
TROAP-201ENST00000257909 ATRXP46100 2492 aa8.36□□□□□ -1.07
TROAP-201ENST00000257909 LOC107984640A0A0U1RRK4 108 aa8.36□□□□□ -1.07
TROAP-201ENST00000257909 CRYGAP11844 174 aa8.36□□□□□ -1.07
TROAP-201ENST00000257909 PIK3CD-AS1Q5SR53 167 aa8.36□□□□□ -1.07
TROAP-201ENST00000257909 BRD3OSQ6XYD6 125 aa8.36□□□□□ -1.07
TROAP-201ENST00000257909 LINC00467Q9BRT7 94 aa8.36□□□□□ -1.07
TROAP-201ENST00000257909 IGLV5-39A0A0G2JS06 123 aa8.35□□□□□ -1.07
TROAP-201ENST00000257909 A6NDX4 124 aa8.35□□□□□ -1.07
TROAP-201ENST00000257909 ATOX1O00244 68 aa8.35□□□□□ -1.07
TROAP-201ENST00000257909 FAM19A5Q7Z5A7 132 aaPredicted RBP8.35□□□□□ -1.07
TROAP-201ENST00000257909 H3BUX3 64 aa8.34□□□□□ -1.07
TROAP-201ENST00000257909 HIST1H4AP62805 103 aaKnown RBP8.34□□□□□ -1.07
TROAP-201ENST00000257909 RPS28P62857 69 aaKnown RBP8.34□□□□□ -1.07
TROAP-201ENST00000257909 BLCAPP62952 87 aa8.34□□□□□ -1.07
TROAP-201ENST00000257909 CFHR3Q02985 330 aa8.34□□□□□ -1.07
TROAP-201ENST00000257909 Q8N2B8 174 aa8.34□□□□□ -1.07
TROAP-201ENST00000257909 DGAT2L7PQ6IED9 249 aa8.34□□□□□ -1.07
TROAP-201ENST00000257909 GAGE2AQ6NT46 116 aa8.34□□□□□ -1.07
TROAP-201ENST00000257909 AKAP6Q13023 2319 aa8.33□□□□□ -1.08
TROAP-201ENST00000257909 ZNF415Q09FC8 603 aa8.33□□□□□ -1.08
TROAP-201ENST00000257909 OR13C6PQ8NH95 151 aa8.33□□□□□ -1.08
TROAP-201ENST00000257909 C2orf48Q96LS8 159 aa8.33□□□□□ -1.08
TROAP-201ENST00000257909 SOSTDC1Q6X4U4 206 aa8.33□□□□□ -1.08
TROAP-201ENST00000257909 C22orf24Q9Y442 160 aa8.33□□□□□ -1.08
TROAP-201ENST00000257909 PF4P02776 101 aa8.32□□□□□ -1.08
TROAP-201ENST00000257909 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.32□□□□□ -1.08
TROAP-201ENST00000257909 ZNF625Q96I27 306 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms