RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 LMO4P61968 165 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 ZFAND2AQ8N6M9 145 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 RPL39LQ96EH5 51 aaKnown RBP3.12□□□□□ -1.91
UBE4A-201ENST00000252108 PRORYQ9H606 182 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 Q9HAA7 133 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 ZFHX2Q9C0A1 2572 aaPredicted RBP3.12□□□□□ -1.91
UBE4A-201ENST00000252108 IGHV1-58A0A0C4DH39 117 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 IGF1P05019 195 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 NDUFV3P56181 108 aaKnown RBP3.12□□□□□ -1.91
UBE4A-201ENST00000252108 LINC00643Q86TS7 51 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 NKAPP1Q8N9T2 125 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 PRO0461Q9UI25 63 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 IGKV2D-24A0A075B6R9 120 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 TINCRA0A1B0GVN0 87 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 MSMBP08118 114 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 MIAQ16674 131 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 BRD3OSQ6XYD6 125 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 CCDC140Q96MF4 163 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 TRAV12-3A0A0B4J271 114 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 FAM236DA0A1B0GTK5 79 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 H3BQ85 93 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 FAM236CP0DP71 79 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 RPL36AP83881 106 aaKnown RBP3.12□□□□□ -1.91
UBE4A-201ENST00000252108 MUSTN1Q8IVN3 82 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 C7orf33Q8WU49 177 aa3.12□□□□□ -1.91
UBE4A-201ENST00000252108 RPL36ALQ969Q0 106 aaKnown RBP3.12□□□□□ -1.91
UBE4A-201ENST00000252108 ANKHD1Q8IWZ3 2542 aaKnown RBP3.12□□□□□ -1.91
UBE4A-201ENST00000252108 EP300Q09472 2414 aaPredicted RBP3.11□□□□□ -1.91
UBE4A-201ENST00000252108 INAFM1C9JVW0 142 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 TENM4Q6N022 2769 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 ARHGAP32A7KAX9 2087 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 ZANQ9Y493 2812 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 IGIPA6NJ69 53 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 H3BUX3 64 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 ATOX1O00244 68 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 MT-ATP8P03928 68 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 ELANEP08246 267 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 UBE2E2Q96LR5 201 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 CR1P17927 2039 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 NUPR2A6NF83 97 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 H0YGX0 51 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 J3QLI3 93 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 NDUFS5O43920 106 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 INSP01308 110 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 IGHG2P01859 326 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 C9orf153Q5TBE3 101 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 Q8N1Y9 231 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 KLLNB2CW77 178 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 G3V318 75 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 A0A087WWL8 130 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 TRACP01848 142 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 TIRAPP58753 221 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 SELENOKQ9Y6D0 94 aa3.11□□□□□ -1.91
UBE4A-201ENST00000252108 IGHV3-53P01767 116 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 PRB3Q04118 309 aaPredicted RBP3.1□□□□□ -1.91
UBE4A-201ENST00000252108 PTH2Q96A98 100 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 DNAH1Q9P2D7 4330 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 ADARB2-AS1A8MUL3 147 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 B5MCH6 92 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 GNRH2O43555 120 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 CXCL5P42830 114 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 TMEM263Q8WUH6 116 aaKnown RBP3.1□□□□□ -1.91
UBE4A-201ENST00000252108 TRGV1A0A0A0MS02 117 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 ZNF22P17026 224 aaPredicted RBP3.1□□□□□ -1.91
UBE4A-201ENST00000252108 SMIM20Q8N5G0 67 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 FAM222AQ5U5X8 452 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 TMEM86BQ8N661 226 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 C9orf85Q96MD7 179 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 LINC01600Q96MT4 127 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 C11orf21Q9P2W6 132 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 TRAV8-3A0A0A6YYJ7 113 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 IGHV3-16A0A0C4DH30 117 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 XGP55808 180 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 PPDPFQ9H3Y8 114 aa3.1□□□□□ -1.91
UBE4A-201ENST00000252108 KMT2BQ9UMN6 2715 aaPredicted RBP3.09□□□□□ -1.91
UBE4A-201ENST00000252108 SVILO95425 2214 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 M0R2N4 97 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 COX7A2LO14548 114 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 UQCRQO14949 82 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 IGHV3-30-3P0DP02 117 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 PLA2G2AP14555 144 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 HILS1P60008 231 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 MRPS36P82909 103 aaKnown RBP3.09□□□□□ -1.91
UBE4A-201ENST00000252108 TMEM219Q86XT9 240 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 DAND5Q8N907 189 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 CDIP1Q9H305 208 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 LST1O00453 97 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 HIVEP3Q5T1R4 2406 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 IGLV4-69A0A075B6H9 119 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 A0A0J9YXV3 536 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 TRBV10-1A0A0K0K1A3 114 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 C19orf84I3L1E1 186 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 RNASE3P12724 160 aaKnown RBP3.09□□□□□ -1.91
UBE4A-201ENST00000252108 PRIMA1Q86XR5 153 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 KIR2DL5BQ8NHK3 375 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 JPT2Q9H910 190 aa3.09□□□□□ -1.91
UBE4A-201ENST00000252108 A8MTW9 85 aa3.09□□□□□ -1.92
UBE4A-201ENST00000252108 H7C423 109 aa3.09□□□□□ -1.92
UBE4A-201ENST00000252108 M0QY20 66 aa3.09□□□□□ -1.92
UBE4A-201ENST00000252108 NDUFA1O15239 70 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms