RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 TRBV10-1A0A0K0K1A3 114 aa11.84□□□□□ -0.51
SIN3B-201ENST00000248054 C20orf203Q8NBC4 194 aa11.84□□□□□ -0.51
SIN3B-201ENST00000248054 C20orf173Q96LM9 149 aa11.84□□□□□ -0.51
SIN3B-201ENST00000248054 SPRY2O43597 315 aa11.84□□□□□ -0.51
SIN3B-201ENST00000248054 CXCL5P42830 114 aa11.84□□□□□ -0.51
SIN3B-201ENST00000248054 DEFB1P60022 68 aa11.84□□□□□ -0.51
SIN3B-201ENST00000248054 SND1-IT1Q9HBX3 110 aa11.84□□□□□ -0.51
SIN3B-201ENST00000248054 PKIGQ9Y2B9 76 aa11.84□□□□□ -0.51
SIN3B-201ENST00000248054 SPART-AS1P0CW21 52 aa11.83□□□□□ -0.52
SIN3B-201ENST00000248054 CFAP126Q5VTH2 177 aa11.83□□□□□ -0.52
SIN3B-201ENST00000248054 COX7B2Q8TF08 81 aa11.83□□□□□ -0.52
SIN3B-201ENST00000248054 IGHV1-58A0A0C4DH39 117 aa11.83□□□□□ -0.52
SIN3B-201ENST00000248054 ZFAND2AQ8N6M9 145 aa11.83□□□□□ -0.52
SIN3B-201ENST00000248054 TRBV7-3A0A075B6L6 115 aa11.83□□□□□ -0.52
SIN3B-201ENST00000248054 ATOX1O00244 68 aa11.83□□□□□ -0.52
SIN3B-201ENST00000248054 MDFICQ9P1T7 246 aa11.83□□□□□ -0.52
SIN3B-201ENST00000248054 CHD9Q3L8U1 2897 aa11.83□□□□□ -0.52
SIN3B-201ENST00000248054 FAM236AA0A1B0GUQ0 79 aa11.83□□□□□ -0.52
SIN3B-201ENST00000248054 FAM236BA0A1B0GV22 79 aa11.83□□□□□ -0.52
SIN3B-201ENST00000248054 PLA2G2AP14555 144 aa11.83□□□□□ -0.52
SIN3B-201ENST00000248054 ATP5G1P05496 136 aa11.82□□□□□ -0.52
SIN3B-201ENST00000248054 CRIP1P50238 77 aa11.82□□□□□ -0.52
SIN3B-201ENST00000248054 VSIG2Q96IQ7 327 aa11.82□□□□□ -0.52
SIN3B-201ENST00000248054 PCSK5Q92824 1860 aa11.82□□□□□ -0.52
SIN3B-201ENST00000248054 TRAV4A0A0B4J268 109 aa11.81□□□□□ -0.52
SIN3B-201ENST00000248054 JMJD7-PLA2G4BH0Y9G9 81 aa11.81□□□□□ -0.52
SIN3B-201ENST00000248054 PTPRBP23467 1997 aa11.81□□□□□ -0.52
SIN3B-201ENST00000248054 NAV2Q8IVL1 2488 aa11.81□□□□□ -0.52
SIN3B-201ENST00000248054 XCL1P47992 114 aa11.81□□□□□ -0.52
SIN3B-201ENST00000248054 RPL39P62891 51 aaKnown RBP11.81□□□□□ -0.52
SIN3B-201ENST00000248054 U3KQK5 164 aa11.81□□□□□ -0.52
SIN3B-201ENST00000248054 NOTCH3Q9UM47 2321 aa11.8□□□□□ -0.52
SIN3B-201ENST00000248054 J3KT08 172 aa11.8□□□□□ -0.52
SIN3B-201ENST00000248054 DSCAML1Q8TD84 2053 aa11.8□□□□□ -0.52
SIN3B-201ENST00000248054 MRPS12O15235 138 aaKnown RBP11.8□□□□□ -0.52
SIN3B-201ENST00000248054 PLXNB1O43157 2135 aa11.79□□□□□ -0.52
SIN3B-201ENST00000248054 TINCRA0A1B0GVN0 87 aa11.79□□□□□ -0.52
SIN3B-201ENST00000248054 ZMAT4Q9H898 229 aa11.79□□□□□ -0.52
SIN3B-201ENST00000248054 OPRPNQ99935 248 aaPredicted RBP11.79□□□□□ -0.52
SIN3B-201ENST00000248054 NAV3Q8IVL0 2385 aa11.79□□□□□ -0.52
SIN3B-201ENST00000248054 COX7A2LO14548 114 aa11.78□□□□□ -0.52
SIN3B-201ENST00000248054 AVPP01185 164 aa11.78□□□□□ -0.52
SIN3B-201ENST00000248054 FAM110AQ9BQ89 295 aa11.78□□□□□ -0.52
SIN3B-201ENST00000248054 RAI1Q7Z5J4 1906 aaPredicted RBP11.78□□□□□ -0.52
SIN3B-201ENST00000248054 SMIM9A6NGZ8 99 aa11.78□□□□□ -0.52
SIN3B-201ENST00000248054 HILS1P60008 231 aa11.78□□□□□ -0.52
SIN3B-201ENST00000248054 CSPG4Q6UVK1 2322 aa11.78□□□□□ -0.52
SIN3B-201ENST00000248054 TANC2Q9HCD6 1990 aa11.78□□□□□ -0.52
SIN3B-201ENST00000248054 GYPEP15421 78 aa11.77□□□□□ -0.53
SIN3B-201ENST00000248054 A0A0C4DFX4 3053 aa11.77□□□□□ -0.53
SIN3B-201ENST00000248054 TMEM258P61165 79 aa11.77□□□□□ -0.53
SIN3B-201ENST00000248054 C5orf47Q569G3 176 aa11.76□□□□□ -0.53
SIN3B-201ENST00000248054 C5orf38Q86SI9 138 aa11.76□□□□□ -0.53
SIN3B-201ENST00000248054 CDH23Q9H251 3354 aa11.76□□□□□ -0.53
SIN3B-201ENST00000248054 KLLNB2CW77 178 aa11.76□□□□□ -0.53
SIN3B-201ENST00000248054 MIAQ16674 131 aa11.76□□□□□ -0.53
SIN3B-201ENST00000248054 IGHV4-4A0A075B6R2 117 aa11.75□□□□□ -0.53
SIN3B-201ENST00000248054 C10orf99Q6UWK7 81 aa11.75□□□□□ -0.53
SIN3B-201ENST00000248054 NEXN-AS1Q8NBZ9 246 aa11.75□□□□□ -0.53
SIN3B-201ENST00000248054 TEX49A0A1B0GTD5 131 aa11.75□□□□□ -0.53
SIN3B-201ENST00000248054 DOPEY2Q9Y3R5 2298 aa11.75□□□□□ -0.53
SIN3B-201ENST00000248054 IGHV3-30-3P0DP02 117 aa11.75□□□□□ -0.53
SIN3B-201ENST00000248054 HHLA3Q9XRX5 114 aa11.75□□□□□ -0.53
SIN3B-201ENST00000248054 CEP295Q9C0D2 2601 aa11.74□□□□□ -0.53
SIN3B-201ENST00000248054 PDE6GP18545 87 aa11.74□□□□□ -0.53
SIN3B-201ENST00000248054 CDIP1Q9H305 208 aa11.74□□□□□ -0.53
SIN3B-201ENST00000248054 MRGPRG-AS1Q2M3A8 158 aa11.74□□□□□ -0.53
SIN3B-201ENST00000248054 LINC01006Q8NI28 216 aa11.74□□□□□ -0.53
SIN3B-201ENST00000248054 CNFNQ9BYD5 112 aa11.74□□□□□ -0.53
SIN3B-201ENST00000248054 M0QXV9 152 aa11.74□□□□□ -0.53
SIN3B-201ENST00000248054 HIST2H2BCQ6DN03 193 aa11.74□□□□□ -0.53
SIN3B-201ENST00000248054 COX8CQ7Z4L0 72 aa11.74□□□□□ -0.53
SIN3B-201ENST00000248054 NDUFA7O95182 113 aa11.74□□□□□ -0.53
SIN3B-201ENST00000248054 FUSP35637 526 aaKnown RBP eCLIP11.74□□□□□ -0.53
SIN3B-201ENST00000248054 Q6ZS46 218 aa11.73□□□□□ -0.53
SIN3B-201ENST00000248054 NFE4Q86UQ8 179 aa11.73□□□□□ -0.53
SIN3B-201ENST00000248054 DCANP1Q8TF63 244 aa11.73□□□□□ -0.53
SIN3B-201ENST00000248054 ANKRD11Q6UB99 2663 aaPredicted RBP11.73□□□□□ -0.53
SIN3B-201ENST00000248054 F8W735 103 aaPredicted RBP11.73□□□□□ -0.53
SIN3B-201ENST00000248054 UNC80Q8N2C7 3258 aa11.73□□□□□ -0.53
SIN3B-201ENST00000248054 C1orf43Q9BWL3 253 aa11.72□□□□□ -0.53
SIN3B-201ENST00000248054 RS1O15537 224 aa11.72□□□□□ -0.53
SIN3B-201ENST00000248054 A0A096LNJ9 63 aa11.72□□□□□ -0.53
SIN3B-201ENST00000248054 A0A0J9YY99 117 aa11.72□□□□□ -0.53
SIN3B-201ENST00000248054 RNF185Q96GF1 192 aa11.72□□□□□ -0.53
SIN3B-201ENST00000248054 LY6G6DO95868 133 aa11.72□□□□□ -0.53
SIN3B-201ENST00000248054 PRO0255Q9UI72 69 aa11.72□□□□□ -0.53
SIN3B-201ENST00000248054 PIK3CD-AS1Q5SR53 167 aa11.71□□□□□ -0.53
SIN3B-201ENST00000248054 A0A0J9YXY3 114 aa11.71□□□□□ -0.53
SIN3B-201ENST00000248054 H7C423 109 aa11.71□□□□□ -0.53
SIN3B-201ENST00000248054 LINC00643Q86TS7 51 aa11.71□□□□□ -0.53
SIN3B-201ENST00000248054 CLPSL2Q6UWE3 100 aa11.71□□□□□ -0.53
SIN3B-201ENST00000248054 INAFM1C9JVW0 142 aa11.71□□□□□ -0.54
SIN3B-201ENST00000248054 ARHGAP32A7KAX9 2087 aa11.71□□□□□ -0.54
SIN3B-201ENST00000248054 TRBV6-5A0A0K0K1A5 114 aa11.7□□□□□ -0.54
SIN3B-201ENST00000248054 A0A096LPF7 62 aa11.7□□□□□ -0.54
SIN3B-201ENST00000248054 LYRM9A8MSI8 78 aa11.7□□□□□ -0.54
SIN3B-201ENST00000248054 KRTAP10-9P60411 292 aa11.7□□□□□ -0.54
SIN3B-201ENST00000248054 CAMK2N2Q96S95 79 aa11.7□□□□□ -0.54
SIN3B-201ENST00000248054 Q6ZQT7 251 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms