RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 HNRNPA3P51991 378 aaKnown RBP4.02□□□□□ -1.77
AFP-201ENST00000226359 ERCC8Q13216 396 aa4.02□□□□□ -1.77
AFP-201ENST00000226359 RIGQ13278 110 aa4.02□□□□□ -1.77
AFP-201ENST00000226359 SPATA45Q537H7 98 aa4.02□□□□□ -1.77
AFP-201ENST00000226359 TMEM136Q6ZRR5 245 aa4.02□□□□□ -1.77
AFP-201ENST00000226359 Q8TAT8 98 aa4.02□□□□□ -1.77
AFP-201ENST00000226359 C2orf48Q96LS8 159 aa4.02□□□□□ -1.77
AFP-201ENST00000226359 UQCR10Q9UDW1 63 aa4.02□□□□□ -1.77
AFP-201ENST00000226359 TMSB15BA0A087X1C1 80 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 TRAV12-3A0A0B4J271 114 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 FABP5P3A8MUU1 101 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 CRXO43186 299 aaPredicted RBP4.01□□□□□ -1.77
AFP-201ENST00000226359 RNASE4P34096 147 aaKnown RBP4.01□□□□□ -1.77
AFP-201ENST00000226359 ZNF138P52744 262 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 HBBP68871 147 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 Q6AWC8 147 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 Q6ZN92 141 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 SMIM15Q7Z3B0 74 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 BAGE3Q86Y29 109 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 POM121L12Q8N7R1 296 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 STPG4Q8N801 248 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 NTN5Q8WTR8 489 aaPredicted RBP4.01□□□□□ -1.77
AFP-201ENST00000226359 SAMD10Q9BYL1 202 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 NOP10Q9NPE3 64 aaKnown RBP4.01□□□□□ -1.77
AFP-201ENST00000226359 RYR3Q15413 4870 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 SACSQ9NZJ4 4579 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 CSMD3Q7Z407 3707 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 TRGV2A0A075B6R0 118 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 TRBV7-9A0A0J9YWB2 115 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 A0A1B0GUT8 65 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 A0A1B0GW15 77 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 GRIFINA4D1Z8 144 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 SERF1AO75920 110 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 TSHBP01222 138 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 ORM1P02763 201 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 PRSS2P07478 247 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 CRIP1P50238 77 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 KRTDAPP60985 99 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 KIAA1644Q3SXP7 199 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 RNASEKQ6P5S7 137 aaKnown RBP4.01□□□□□ -1.77
AFP-201ENST00000226359 C9orf47Q6ZRZ4 202 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 GTSF1Q8WW33 167 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 AGPAT4-IT1Q9H0P7 198 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 LAMTOR2Q9Y2Q5 125 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 LENEPQ9Y5L5 61 aa4.01□□□□□ -1.77
AFP-201ENST00000226359 TENM2Q9NT68 2774 aa4□□□□□ -1.77
AFP-201ENST00000226359 DNAH1Q9P2D7 4330 aa4□□□□□ -1.77
AFP-201ENST00000226359 CTRLP40313 264 aa4□□□□□ -1.77
AFP-201ENST00000226359 FOXA3P55318 350 aaPredicted RBP4□□□□□ -1.77
AFP-201ENST00000226359 Q0VG73 95 aa4□□□□□ -1.77
AFP-201ENST00000226359 SLAQ13239 276 aa4□□□□□ -1.77
AFP-201ENST00000226359 SRSF9Q13242 221 aaKnown RBP eCLIP4□□□□□ -1.77
AFP-201ENST00000226359 OR4C5Q8NGB2 326 aa4□□□□□ -1.77
AFP-201ENST00000226359 ZNF479Q96JC4 524 aa4□□□□□ -1.77
AFP-201ENST00000226359 FAM218AQ96MZ4 157 aa4□□□□□ -1.77
AFP-201ENST00000226359 TP53TG3Q9ULZ0 132 aa4□□□□□ -1.77
AFP-201ENST00000226359 IGHV1OR15-1A0A075B7D0 117 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 TRGV1A0A0A0MS02 117 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 A0A1B0GXF2 115 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 PPBPP02775 128 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 IGLC3P0DOY3 106 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 SRIP30626 198 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 ZNF80P51504 273 aaPredicted RBP3.99□□□□□ -1.77
AFP-201ENST00000226359 CCL18P55774 89 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 OR10J3Q5JRS4 329 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 LINC00336Q6ZUF6 198 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 LINC00467Q9BRT7 94 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 GEMIN7Q9H840 131 aaKnown RBP3.99□□□□□ -1.77
AFP-201ENST00000226359 KLLNB2CW77 178 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 ARMS2P0C7Q2 107 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 AZU1P20160 251 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 HINT1P49773 126 aaPredicted RBP3.99□□□□□ -1.77
AFP-201ENST00000226359 XGP55808 180 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 DAZ2Q13117 558 aaKnown RBP3.99□□□□□ -1.77
AFP-201ENST00000226359 LYZL1Q6UWQ5 148 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 Q8N976 141 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 FER1L6-AS1Q8NA97 138 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 VPS25Q9BRG1 176 aa3.99□□□□□ -1.77
AFP-201ENST00000226359 MRPS16Q9Y3D3 137 aaKnown RBP3.99□□□□□ -1.77
AFP-201ENST00000226359 AGRNO00468 2067 aa3.98□□□□□ -1.77
AFP-201ENST00000226359 TRAV21A0A0B4J279 112 aa3.98□□□□□ -1.77
AFP-201ENST00000226359 VAMP3Q15836 100 aa3.98□□□□□ -1.77
AFP-201ENST00000226359 LINC01561Q8N1V8 128 aa3.98□□□□□ -1.77
AFP-201ENST00000226359 CSDC2Q9Y534 153 aaKnown RBP3.98□□□□□ -1.77
AFP-201ENST00000226359 F2Z2F3 143 aa3.97□□□□□ -1.77
AFP-201ENST00000226359 TWIST1Q15672 202 aa3.97□□□□□ -1.77
AFP-201ENST00000226359 C6orf226Q5I0X4 101 aa3.97□□□□□ -1.77
AFP-201ENST00000226359 TTC32Q5I0X7 151 aa3.97□□□□□ -1.77
AFP-201ENST00000226359 KCNS1Q96KK3 526 aa3.97□□□□□ -1.77
AFP-201ENST00000226359 DNAH6Q9C0G6 4158 aa3.97□□□□□ -1.77
AFP-201ENST00000226359 PLAC8L1A1L4L8 177 aa3.97□□□□□ -1.77
AFP-201ENST00000226359 PRM2P04554 102 aa3.97□□□□□ -1.77
AFP-201ENST00000226359 PMCHP20382 165 aa3.97□□□□□ -1.77
AFP-201ENST00000226359 GAGE5Q13069 117 aa3.97□□□□□ -1.77
AFP-201ENST00000226359 GAGE6Q13070 117 aa3.97□□□□□ -1.77
AFP-201ENST00000226359 PMCHL1Q16048 86 aa3.97□□□□□ -1.77
AFP-201ENST00000226359 LGALS9BQ3B8N2 356 aa3.97□□□□□ -1.77
AFP-201ENST00000226359 Q6ZVH6 145 aa3.97□□□□□ -1.77
AFP-201ENST00000226359 ZFAND2AQ8N6M9 145 aa3.97□□□□□ -1.77
AFP-201ENST00000226359 GATD1Q8NB37 220 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms