RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Ssbp3Q9D032 388 aa10.7□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Pygo1Q9D0P5 417 aa10.7□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Nubp1Q9R060 320 aa10.7□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Hsd17b6Q9R092 317 aa10.7□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Cited4Q9WUL8 182 aa10.7□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Gm11565A2A4M7 156 aa10.69□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Gm5239D3YYZ2 122 aa10.69□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 BokO35425 213 aa10.69□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Cd81P35762 236 aa10.69□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Trav15-1-dv6-1Q5R1D2 117 aa10.69□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Vmn1r195Q5SVD6 316 aa10.69□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Derl1Q99J56 251 aa10.69□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Q9D8L0 127 aa10.69□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Vmn1r46Q9EQ45 309 aa10.69□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Hcfc1Q61191 2045 aaKnown RBP10.69□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 eef1akmt3D3YWP0 232 aa10.68□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Olfr556E9Q549 324 aa10.68□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Tnfsf11O35235 316 aa10.68□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 1700009N14RikQ14AA6 216 aaKnown RBP10.68□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Gm14851Q5ERJ0 116 aa10.68□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 FshbQ60687 130 aa10.68□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 BC049730Q810N3 246 aa10.68□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Tusc5Q8C838 173 aa10.68□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Pitpnc1Q8K4R4 332 aa10.68□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Olfr123Q8VFQ1 309 aa10.68□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Ppp1r14aQ91VC7 147 aa10.68□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Gatad1Q920S3 266 aa10.68□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Necap2Q9D1J1 266 aa10.68□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Ptprz1B9EKR1 2312 aa10.68□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Ighv1-31A0A0A6YWK5 117 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Olfr1189A2AV11 306 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Olfr218E9PWV2 313 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Gm9970F6ZED4 185 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Gata2O09100 480 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 P04944 107 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 HexbP20060 536 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Plp1P60202 277 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Gcm1P70348 436 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Immp2lQ8BPT6 175 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Olfr1242Q8VGM6 306 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Gpa33Q9JKA5 319 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Dolpp1Q9JMF7 238 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Pard6aQ9Z101 346 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Ighv5-6A0A075B5Q0 117 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Tmem29A2ANF5 204 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Olfr624F8VQI7 308 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Vmn1r78K7N608 313 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 TfpiO54819 306 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 CebpdQ00322 268 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Spsb3Q571F5 354 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Olfr411Q7TRW8 315 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Hoxc12Q8K5B8 280 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 SpartQ8R1X6 671 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Foxj2Q9ES18 565 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Ctnnbip1Q9JJN6 81 aa10.67□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Ubr5Q80TP3 2792 aa10.66□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Ighv1-15A0A0A6YXA5 117 aa10.66□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Trbv1A0A0B4J1G7 116 aa10.66□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Zfp980A2A9J5 645 aa10.66□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 D930048N14RikA2AA67 225 aa10.66□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Olfr748E9Q9Z0 307 aa10.66□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 P01789 122 aa10.66□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 LtaP09225 202 aa10.66□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Ube2l3P68037 154 aaKnown RBP10.66□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Slc25a48Q8BW66 306 aa10.66□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Foxn4Q8K3Q3 521 aa10.66□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Olfr1258Q8VGN6 311 aa10.66□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Ssbp2Q9CYZ8 361 aa10.66□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Dram1Q9DC58 238 aa10.66□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Pus1Q9WU56 423 aa10.66□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Ighv5-8A0A075B676 92 aa10.65□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Olfr1016A2ASV2 309 aa10.65□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Olfr1537P34983 314 aa10.65□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Crebl2Q32M00 123 aa10.65□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Gm10803Q3TZS6 135 aa10.65□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Smim7Q5RKS2 75 aa10.65□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Higd1cQ76I25 96 aa10.65□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Olfr1246Q7TQZ6 314 aa10.65□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Hist3h2bbQ8CGP0 126 aa10.65□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Olfr577Q8VH11 312 aa10.65□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Shisal2bQ9D1Y9 158 aa10.65□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Hist3h2baQ9D2U9 126 aa10.65□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Spaca3Q9D9X8 221 aa10.65□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Bhlha15Q9QYC3 197 aa10.65□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Timm23Q9WTQ8 209 aa10.65□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Pf4Q9Z126 105 aa10.65□□□□□ -0.7
Pdlim5-208ENSMUST00000196220 Igkv1-132A0A0B4J1H9 120 aa10.64□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Olfr364-ps1A0A140T8Q2 307 aa10.64□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Dynlt3P56387 116 aa10.64□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Arf6P62331 175 aa10.64□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Tpt1P63028 172 aaKnown RBP10.64□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Olfr148Q60887 310 aa10.64□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Rph3alQ768S4 302 aa10.64□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Elovl5Q8BHI7 299 aa10.64□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Vmn1r62Q8R2C0 300 aa10.64□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Olfr509Q8VF20 321 aa10.64□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Olfr435Q8VFS3 313 aa10.64□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Cldn16Q925N4 235 aa10.64□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Polr3kQ9CQZ7 108 aa10.64□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Urm1Q9D2P4 101 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 88.4 ms