RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Olfr873Q8VFJ0 319 aa11.52□□□□□ -0.56
Pcdha1-202ENSMUST00000193839 CenpeQ6RT24 2474 aaKnown RBP11.52□□□□□ -0.56
Pcdha1-202ENSMUST00000193839 Plxnb1Q8CJH3 2119 aa11.52□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gfra1P97785 468 aa11.52□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Atp5iQ06185 71 aaKnown RBP11.52□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Dctn5Q9QZB9 182 aa11.52□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Rnase2bO35292 155 aa11.52□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Ren2P00796 401 aa11.52□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Reep5Q60870 185 aa11.52□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Fam206aQ80ZQ9 193 aaKnown RBP11.52□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 BC049762Q8C601 163 aa11.52□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Olfr1256Q8VGP1 306 aa11.52□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Cnn3Q9DAW9 330 aaKnown RBP11.52□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Susd2Q9DBX3 820 aa11.52□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 P18530 117 aa11.52□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Defa24Q5G865 93 aa11.52□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 EpopQ7TNS8 369 aa11.52□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Olfr958Q8VEY3 312 aa11.52□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Ccl28Q9JIL2 130 aa11.52□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Ifitm7G3X9Z2 141 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Dlx1Q64317 255 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Psmg3Q9CZH3 122 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 LenepQ9WVB6 61 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Trav7n-5A0A075B604 112 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gm21882J3QN86 361 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Foxl2O88470 375 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Ins2P01326 110 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Fbln7Q501P1 440 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Cd200r1lQ6XJV6 249 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Q8CF25 301 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Klk15Q8CGR4 254 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Tnfrsf13cQ9D8D0 175 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Abca7Q91V24 2159 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 A0A1L1SR50 188 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gm10073E9Q3T0 114 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Otx1P80205 355 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 SnrpcQ62241 159 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Wdr83osQ6ZWX0 106 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gm8251F6VUT6 1994 aa11.51□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Trdv2-1A0A0G2JGB9 116 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Dynlt3P56387 116 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Hs3st6Q5GFD5 342 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Trdv2-2Q5R1A4 116 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Vkorc1l1Q6TEK5 176 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Prrg4Q8BGN6 226 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Tex36Q9D5N9 219 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Pmaip1Q9JM54 103 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Col24a1Q30D77 1733 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gm6812B1AXU1 112 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gm20458E9PXJ7 78 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Olfr466E9Q2B9 308 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gm9376G3UW68 176 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gm21913J3KML9 361 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gm21776J3QPJ5 361 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 1700020N15RikL7MTX3 112 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Bsph2Q0Q236 131 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Onecut2Q6XBJ3 505 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Spink6Q8BT20 105 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Higd1bQ99JY6 98 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Tmem219Q9D123 240 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Lamtor2Q9JHS3 125 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 RlfA2A7F4 1918 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gm10203F6QJ09 66 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Prdm6Q3UZD5 596 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Olfr961Q9EQ84 314 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 PoleQ9WVF7 2283 aa11.5□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Ighv1-37A0A0A6YW32 117 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gm45753A0A1C7CYU8 86 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gm20825J3QM67 227 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Ssty2Q149W4 227 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gm21394Q497R7 227 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gm20854Q62461 227 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Elovl5Q8BHI7 299 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 ChtopQ9CY57 249 aaKnown RBP11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gdf15Q9Z0J7 303 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Ighv1-15A0A0A6YXA5 117 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Igkv1-133A0A0B4J1H8 120 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Igkv14-100A0A0G2JG36 117 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Scgb1b24B1B0N6 92 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Bsph1Q3UW26 133 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Tmed6Q9CQG0 239 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Zdhhc16Q9ESG8 361 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Tm4sf19E9Q9H8 206 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Ucp1P12242 307 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Mex3bQ69Z36 601 aaKnown RBP11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 PgpQ8CHP8 321 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Olfr476Q8VGI4 310 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 LbhQ9CX60 105 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Znf329Q6GQR8 522 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Olfr484Q8VFD3 321 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Fmc1Q9CR13 113 aa11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Snrnp200Q6P4T2 2136 aaKnown RBP11.49□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Olfr779E9PUS9 130 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Cpsf4lE9Q2N0 280 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Nkx2-8O70584 235 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Atp6v0cP63082 155 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 H2-DMb2Q31099 261 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Timm21Q8CCM6 249 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Ufc1Q9CR09 167 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Med13Q5SWW4 2171 aa11.48□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 89 ms