RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Zfp950A0A0U1RQ46 609 aa12.5□□□□□ -0.41
Vcan-201ENSMUST00000109543 Vmn1r78K7N608 313 aa12.5□□□□□ -0.41
Vcan-201ENSMUST00000109543 Khdc1bP0C7A0 126 aa12.5□□□□□ -0.41
Vcan-201ENSMUST00000109543 Sumo1P63166 101 aaKnown RBP12.5□□□□□ -0.41
Vcan-201ENSMUST00000109543 Defb20Q30KP3 96 aa12.5□□□□□ -0.41
Vcan-201ENSMUST00000109543 Patz1Q5NBY9 687 aaKnown RBP12.5□□□□□ -0.41
Vcan-201ENSMUST00000109543 Smim7Q5RKS2 75 aa12.5□□□□□ -0.41
Vcan-201ENSMUST00000109543 Ighv1-39A0A075B5V5 117 aa12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Trbv1A0A0B4J1G7 116 aa12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Igkv14-130A0A0G2JF45 117 aa12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Olfr1118A0A0J9YUE7 307 aa12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Olfr1326-ps1A0A140T8J7 311 aa12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Gm10020E9QAZ2 204 aa12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Ptbp1P17225 527 aaKnown RBP12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Icam2P35330 277 aa12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Tpt1P63028 172 aaKnown RBP12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Olfr411Q7TRW8 315 aa12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 C130073F10RikQ8C4L8 201 aa12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Higd1bQ99JY6 98 aa12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Rpl15Q9CZM2 204 aaKnown RBP12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Sox15P43267 231 aa12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Prrx1P63013 245 aa12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Ube2l3P68037 154 aaKnown RBP12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Crebl2Q32M00 123 aa12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Olfr963Q7TRA9 311 aa12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Gm9958Q8C9U4 106 aa12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 ArtnQ9Z0L2 224 aa12.49□□□□□ -0.41
Vcan-201ENSMUST00000109543 Onecut1O08755 465 aa12.48□□□□□ -0.41
Vcan-201ENSMUST00000109543 CompQ9R0G6 755 aa12.48□□□□□ -0.41
Vcan-201ENSMUST00000109543 Zzef1Q5SSH7 2924 aa12.48□□□□□ -0.41
Vcan-201ENSMUST00000109543 Olfr191L7N1Z8 309 aa12.48□□□□□ -0.41
Vcan-201ENSMUST00000109543 Cdkn1aP39689 159 aa12.48□□□□□ -0.41
Vcan-201ENSMUST00000109543 GchfrP99025 84 aa12.48□□□□□ -0.41
Vcan-201ENSMUST00000109543 Spink11Q09TK7 88 aa12.48□□□□□ -0.41
Vcan-201ENSMUST00000109543 Olfr1535Q7TQU0 326 aa12.48□□□□□ -0.41
Vcan-201ENSMUST00000109543 Rnf182Q8C432 247 aa12.48□□□□□ -0.41
Vcan-201ENSMUST00000109543 Gm9949Q8C9F4 104 aa12.48□□□□□ -0.41
Vcan-201ENSMUST00000109543 Slc36a4Q8CH36 500 aa12.48□□□□□ -0.41
Vcan-201ENSMUST00000109543 Olfr1441Q8VFV3 318 aa12.48□□□□□ -0.41
Vcan-201ENSMUST00000109543 Acaa1aQ921H8 424 aaKnown RBP12.48□□□□□ -0.41
Vcan-201ENSMUST00000109543 Tmem183Q9JJB9 375 aa12.48□□□□□ -0.41
Vcan-201ENSMUST00000109543 Ctnnbip1Q9JJN6 81 aa12.48□□□□□ -0.41
Vcan-201ENSMUST00000109543 Osr1Q9WVG7 266 aa12.48□□□□□ -0.41
Vcan-201ENSMUST00000109543 Sec16aA2AIX1 2377 aa12.47□□□□□ -0.41
Vcan-201ENSMUST00000109543 Ighv1-81A0A075B5Y4 117 aa12.47□□□□□ -0.41
Vcan-201ENSMUST00000109543 Vma21-psA0A140T8R2 101 aa12.47□□□□□ -0.41
Vcan-201ENSMUST00000109543 D930048N14RikA2AA67 225 aa12.47□□□□□ -0.41
Vcan-201ENSMUST00000109543 9130204L05RikG3UWB8 92 aa12.47□□□□□ -0.41
Vcan-201ENSMUST00000109543 Gm21913J3KML9 361 aa12.47□□□□□ -0.41
Vcan-201ENSMUST00000109543 Gm21776J3QPJ5 361 aa12.47□□□□□ -0.41
Vcan-201ENSMUST00000109543 Rbp4Q00724 201 aa12.47□□□□□ -0.41
Vcan-201ENSMUST00000109543 Gm9945Q8BNZ3 91 aa12.47□□□□□ -0.41
Vcan-201ENSMUST00000109543 Rbm14Q8C2Q3 669 aaKnown RBP12.47□□□□□ -0.41
Vcan-201ENSMUST00000109543 Olfr1413Q8VGU3 323 aa12.47□□□□□ -0.41
Vcan-201ENSMUST00000109543 Mpv17lQ99MS3 194 aa12.47□□□□□ -0.41
Vcan-201ENSMUST00000109543 Q9D8L0 127 aa12.47□□□□□ -0.41
Vcan-201ENSMUST00000109543 Hsd17b6Q9R092 317 aa12.47□□□□□ -0.41
Vcan-201ENSMUST00000109543 Mixl1Q9WUI0 231 aa12.47□□□□□ -0.41
Vcan-201ENSMUST00000109543 Gab2Q9Z1S8 665 aa12.47□□□□□ -0.41
Vcan-201ENSMUST00000109543 CenpeQ6RT24 2474 aaKnown RBP12.47□□□□□ -0.41
Vcan-201ENSMUST00000109543 SpxD3Z752 116 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Dnd1Q6VY05 352 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Olfr1434Q7TQR9 312 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Rnf2Q9CQJ4 336 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Mrpl41Q9CQN7 135 aaKnown RBP12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Oxld1Q9CR10 201 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 1700008P02RikQ9DAJ8 175 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Trav4-4-dv10A0A075B651 110 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Gm5741B2RVA4 72 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Gm2174F6ZVF2 133 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 P03980 138 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Stfa1P35175 97 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 F7P70375 446 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Gfra1P97785 468 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Cnn1Q08091 297 aaKnown RBP12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Gata4Q08369 441 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Znrf2Q71FD5 238 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Prss3Q792Z0 246 aaKnown RBP12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Olfr1242Q8VGM6 306 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Srd5a2Q99N99 254 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Btf3l4Q9CQH7 158 aaKnown RBP12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Pfdn5Q9WU28 154 aa12.46□□□□□ -0.41
Vcan-201ENSMUST00000109543 Ighv1-15A0A0A6YXA5 117 aa12.45□□□□□ -0.42
Vcan-201ENSMUST00000109543 Rnf5O35445 180 aa12.45□□□□□ -0.42
Vcan-201ENSMUST00000109543 Ccl1P10146 92 aa12.45□□□□□ -0.42
Vcan-201ENSMUST00000109543 BsgP18572 389 aaKnown RBP12.45□□□□□ -0.42
Vcan-201ENSMUST00000109543 Gm26566Q8CAC1 153 aa12.45□□□□□ -0.42
Vcan-201ENSMUST00000109543 Fam216bQ8CC14 138 aa12.45□□□□□ -0.42
Vcan-201ENSMUST00000109543 Oraov1Q8CH62 137 aa12.45□□□□□ -0.42
Vcan-201ENSMUST00000109543 Olfr127Q8VF25 323 aa12.45□□□□□ -0.42
Vcan-201ENSMUST00000109543 Olfr211Q8VGH2 309 aa12.45□□□□□ -0.42
Vcan-201ENSMUST00000109543 Olfr33Q8VGX7 318 aa12.45□□□□□ -0.42
Vcan-201ENSMUST00000109543 Ighv4-1A0A075B5R5 116 aa12.45□□□□□ -0.42
Vcan-201ENSMUST00000109543 Psg18B2RSG7 476 aa12.45□□□□□ -0.42
Vcan-201ENSMUST00000109543 BokO35425 213 aa12.45□□□□□ -0.42
Vcan-201ENSMUST00000109543 Ascl2O35885 263 aa12.45□□□□□ -0.42
Vcan-201ENSMUST00000109543 TfpiO54819 306 aa12.45□□□□□ -0.42
Vcan-201ENSMUST00000109543 Olfr972Q9EQA2 314 aa12.45□□□□□ -0.42
Vcan-201ENSMUST00000109543 Ovol1Q9WTJ2 267 aa12.45□□□□□ -0.42
Vcan-201ENSMUST00000109543 Gm21060J3KMU4 56 aa12.44□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms