RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Igkv1-131A0A140T8M8 120 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Cnih1O35372 144 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Foxh1O88621 401 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Hist1h2bmP10854 126 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Bmp5P49003 452 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 B020031M17RikQ3UT11 173 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Hist1h2bhQ64478 126 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Hist2h2bbQ64525 126 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Hist1h2bcQ6ZWY9 126 aaKnown RBP11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gng10Q9CXP8 68 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Sgms2Q9D4B1 365 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Vsig2Q9Z109 328 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gpr132Q9Z282 382 aa11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Dido1Q8C9B9 2256 aaKnown RBP11.79□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gm28171A0A087WQ19 227 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gm20773A0A0A6YXW2 232 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gm20807A0A0A6YXX7 232 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gm11565A2A4M7 156 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Znf431E9QAG8 526 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gm20873J3QMQ9 232 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gm20795J3QP49 232 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gm21310J3QQ23 232 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 P01789 122 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Cdx1P18111 268 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gm21440Q3TTD8 232 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Pef1Q8BFY6 275 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Hif1anQ8BLR9 349 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 SpartQ8R1X6 671 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Olfr1242Q8VGM6 306 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Smdt1Q9DB10 107 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Celsr2Q9R0M0 2920 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gm28845A0A087WR76 214 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Rnf5O35445 180 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Nkx2-8O70584 235 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 P01787 123 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Wfdc9Q3UW41 83 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 C1ql4Q4ZJM9 238 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Cd52Q64389 74 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Olfr965Q7TRA7 312 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Fam78bQ8BQN5 261 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 COA4Q8BT51 87 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Commd9Q8K2Q0 198 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Olfr1030Q8VFL5 318 aa11.78□□□□□ -0.52
Nup88-202ENSMUST00000108530 Zfp950A0A0U1RQ46 609 aa11.77□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gm6993A0A1W2P738 69 aa11.77□□□□□ -0.52
Nup88-202ENSMUST00000108530 Ifna4P07351 186 aa11.77□□□□□ -0.52
Nup88-202ENSMUST00000108530 Gm9733Q1AN91 178 aa11.77□□□□□ -0.52
Nup88-202ENSMUST00000108530 OpalinQ7M750 143 aa11.77□□□□□ -0.52
Nup88-202ENSMUST00000108530 Nit1Q8VDK1 323 aa11.77□□□□□ -0.52
Nup88-202ENSMUST00000108530 GlrxQ9QUH0 107 aa11.77□□□□□ -0.52
Nup88-202ENSMUST00000108530 Rnd2Q9QYM5 227 aa11.77□□□□□ -0.52
Nup88-202ENSMUST00000108530 BC053393A0A0B4J1F6 192 aa11.77□□□□□ -0.53
Nup88-202ENSMUST00000108530 Olfr364-ps1A0A140T8Q2 307 aa11.77□□□□□ -0.53
Nup88-202ENSMUST00000108530 Vma21-psA0A140T8R2 101 aa11.77□□□□□ -0.53
Nup88-202ENSMUST00000108530 LalbaP29752 143 aa11.77□□□□□ -0.53
Nup88-202ENSMUST00000108530 ErasQ7TN89 227 aa11.77□□□□□ -0.53
Nup88-202ENSMUST00000108530 Olfr1382Q7TQT3 311 aa11.77□□□□□ -0.53
Nup88-202ENSMUST00000108530 Olfr43Q7TRX1 313 aa11.77□□□□□ -0.53
Nup88-202ENSMUST00000108530 Elovl5Q8BHI7 299 aa11.77□□□□□ -0.53
Nup88-202ENSMUST00000108530 Sh3bgrl3Q91VW3 93 aa11.77□□□□□ -0.53
Nup88-202ENSMUST00000108530 Tmem70Q921N7 253 aa11.77□□□□□ -0.53
Nup88-202ENSMUST00000108530 Ccdc198Q9CPZ1 294 aa11.77□□□□□ -0.53
Nup88-202ENSMUST00000108530 Mad2l1bpQ9DCX1 276 aa11.77□□□□□ -0.53
Nup88-202ENSMUST00000108530 Zfp980A2A9J5 645 aa11.76□□□□□ -0.53
Nup88-202ENSMUST00000108530 Gm27021M0QWE2 156 aa11.76□□□□□ -0.53
Nup88-202ENSMUST00000108530 P01724 129 aa11.76□□□□□ -0.53
Nup88-202ENSMUST00000108530 Zfp92Q62396 488 aa11.76□□□□□ -0.53
Nup88-202ENSMUST00000108530 Ifna14Q810G3 189 aa11.76□□□□□ -0.53
Nup88-202ENSMUST00000108530 Aqp11Q8BHH1 271 aa11.76□□□□□ -0.53
Nup88-202ENSMUST00000108530 Phf13Q8K2W6 296 aa11.76□□□□□ -0.53
Nup88-202ENSMUST00000108530 Ythdf2Q91YT7 579 aaKnown RBP11.76□□□□□ -0.53
Nup88-202ENSMUST00000108530 Cyb5r3Q9DCN2 301 aaKnown RBP11.76□□□□□ -0.53
Nup88-202ENSMUST00000108530 Rnase4Q9JJH1 148 aa11.76□□□□□ -0.53
Nup88-202ENSMUST00000108530 Hdgfl3Q9JMG7 202 aa11.76□□□□□ -0.53
Nup88-202ENSMUST00000108530 Col7a1Q63870 2944 aa11.76□□□□□ -0.53
Nup88-202ENSMUST00000108530 Trbv31A0A075B5J5 111 aa11.76□□□□□ -0.53
Nup88-202ENSMUST00000108530 Olfr917Q7TRC3 309 aa11.76□□□□□ -0.53
Nup88-202ENSMUST00000108530 Gm9945Q8BNZ3 91 aa11.76□□□□□ -0.53
Nup88-202ENSMUST00000108530 Insig2Q91WG1 225 aa11.76□□□□□ -0.53
Nup88-202ENSMUST00000108530 Hivep2Q3UHF7 2430 aa11.75□□□□□ -0.53
Nup88-202ENSMUST00000108530 TrrapQ80YV3 2565 aaKnown RBP11.75□□□□□ -0.53
Nup88-202ENSMUST00000108530 Gm44596A0A0N4SVA0 210 aa11.75□□□□□ -0.53
Nup88-202ENSMUST00000108530 Rsg1A2A825 258 aa11.75□□□□□ -0.53
Nup88-202ENSMUST00000108530 TcapO70548 167 aa11.75□□□□□ -0.53
Nup88-202ENSMUST00000108530 Tppp2Q0P5Y3 170 aa11.75□□□□□ -0.53
Nup88-202ENSMUST00000108530 Dnd1Q6VY05 352 aa11.75□□□□□ -0.53
Nup88-202ENSMUST00000108530 Gm4763Q8CFJ5 196 aa11.75□□□□□ -0.53
Nup88-202ENSMUST00000108530 Polr3kQ9CQZ7 108 aa11.75□□□□□ -0.53
Nup88-202ENSMUST00000108530 CompQ9R0G6 755 aa11.75□□□□□ -0.53
Nup88-202ENSMUST00000108530 Muc4Q8JZM8 3443 aa11.75□□□□□ -0.53
Nup88-202ENSMUST00000108530 Trav23A0A0G2JG17 115 aa11.75□□□□□ -0.53
Nup88-202ENSMUST00000108530 4930444P10RikD3YUR1 185 aa11.75□□□□□ -0.53
Nup88-202ENSMUST00000108530 Spem1Q5F289 310 aa11.75□□□□□ -0.53
Nup88-202ENSMUST00000108530 Mrps10Q80ZK0 160 aaKnown RBP11.75□□□□□ -0.53
Nup88-202ENSMUST00000108530 Bpifb3Q80ZU7 473 aa11.75□□□□□ -0.53
Nup88-202ENSMUST00000108530 Gm10309Q8C648 119 aa11.75□□□□□ -0.53
Nup88-202ENSMUST00000108530 Ighv1-55A0A075B5W6 117 aa11.74□□□□□ -0.53
Nup88-202ENSMUST00000108530 Igkv14-130A0A0G2JF45 117 aa11.74□□□□□ -0.53
Nup88-202ENSMUST00000108530 NdpP48744 131 aa11.74□□□□□ -0.53
Nup88-202ENSMUST00000108530 RhobP62746 196 aa11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 7.9 ms