RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Trav4-2A0A075B638 110 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Ighv1-36A0A0A6YXT2 117 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Defb30Q30KN4 75 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Zic3Q62521 466 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Zfp455Q7M6X9 461 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Slc25a20Q9Z2Z6 301 aaKnown RBP9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Pkd1l3Q2EG98 2201 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Tmed6Q9CQG0 239 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 P01801 115 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Rps20P60867 119 aaKnown RBP9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Cnn1Q08091 297 aaKnown RBP9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Cks1brtQ3UNC9 96 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Olfr983Q8VG90 315 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Ighv1-22A0A075B5U7 117 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Scgb2a2J3KMP9 96 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm4133K9J7G6 307 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Ptbp1P17225 527 aaKnown RBP9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Spink11Q09TK7 88 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Oosp2Q4FZG8 168 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Psg22Q810J1 475 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 4930474N05RikQ8BVR5 218 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Mcrip2Q9CQB2 160 aaKnown RBP9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Malsu1Q9CWV0 228 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 G6pc2Q9Z186 355 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Platr25A0A1Y7VIZ1 466 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm6034E9Q101 117 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm19684G3UZ45 117 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Olfr968Q8VFN4 314 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm2174F6ZVF2 133 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Rnf5O35445 180 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 ElobP62869 118 aa9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Ahctf1Q8CJF7 2243 aaKnown RBP9.73□□□□□ -0.85
Pcif1-201ENSMUST00000041643 MsmpB1AWI6 139 aa9.72□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Tnfsf18Q7TS55 173 aa9.72□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gatad1Q920S3 266 aa9.72□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Arhgap21Q6DFV3 1944 aa9.72□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Ighv6-3A0A075B5T2 118 aa9.72□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Olfr1192-ps1A0A1L1SRD7 309 aa9.72□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Siglec12Q91Y57 467 aa9.72□□□□□ -0.85
Pcif1-201ENSMUST00000041643 PpyP10601 100 aa9.72□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Loxl2P58022 776 aa9.72□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Q5BN45 167 aa9.72□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Cox19Q8K0C8 92 aa9.72□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Olfr1258Q8VGN6 311 aa9.72□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Klrd1O54707 179 aa9.71□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Lmo1Q924W9 156 aa9.71□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Ifitm2Q99J93 144 aa9.71□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Mpv17lQ99MS3 194 aa9.71□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Fancd2osQ9D4K4 178 aa9.71□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Trip12G5E870 2025 aaKnown RBP9.71□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm15091B1AZM2 449 aa9.71□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Ear14F6YUX7 155 aa9.71□□□□□ -0.85
Pcif1-201ENSMUST00000041643 OtosQ8R448 89 aa9.71□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Tmem100Q9CQG9 134 aa9.71□□□□□ -0.85
Pcif1-201ENSMUST00000041643 ArtnQ9Z0L2 224 aa9.71□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Ighv9-1A0A0B4J1P3 117 aa9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 AdipoqQ60994 247 aa9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Duxbl2Q7TNE6 350 aa9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Scnm1Q8K136 229 aa9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 TectaO08523 2155 aa9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Ighv1-26A0A075B5V0 117 aa9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Tcrg-C2A0A075B5Z2 167 aa9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Amn1B8JKV0 258 aa9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 P01853 167 aa9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Cdx4Q07424 282 aa9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Rbm38Q62176 237 aaKnown RBP9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Urb1Q571H0 2274 aaKnown RBP9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Gm12355A2A4X6 163 aa9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Srsf3P84104 164 aaKnown RBP9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 SnrpcQ62241 159 aa9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Gng5Q80SZ7 68 aa9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Tmem129Q8K304 362 aa9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Klhdc3Q8VEM9 382 aa9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Pbp2Q8VIN1 187 aa9.71□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Olfr1116E9PXB8 307 aa9.7□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Irf2bp2E9Q1P8 570 aa9.7□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Tmem88bQ3TYP4 173 aa9.7□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Tmprss12Q3V0Q7 336 aa9.7□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Ccl12Q62401 104 aa9.7□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Shisal2bQ9D1Y9 158 aa9.7□□□□□ -0.86
Pcif1-201ENSMUST00000041643 TprF6ZDS4 2431 aaKnown RBP9.7□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Olfr1337A2ACY8 315 aa9.7□□□□□ -0.86
Pcif1-201ENSMUST00000041643 AY761184Q9D848 116 aa9.7□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Pmp2P24526 132 aa9.7□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Spsb3Q571F5 354 aa9.7□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Sfrp4Q9Z1N6 351 aa9.7□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Scgb1b24B1B0N6 92 aa9.7□□□□□ -0.86
Pcif1-201ENSMUST00000041643 1810011H11RikE9PVZ2 95 aa9.7□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Wdr83osQ6ZWX0 106 aa9.7□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Tmem50aQ9CXL1 157 aa9.7□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Efnb3O35393 340 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Meox2P32443 303 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Ripply2Q2WG76 128 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Tmem189Q99LQ7 271 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Zmat5Q9CQR5 170 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 BsgP18572 389 aaKnown RBP9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Olfr223Q8VF69 319 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Parp4E9PYK3 1969 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Trav21-dv12A0A075B6C4 109 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 P06334 169 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms