RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Gm42517A0A1Y7VLQ2 374 aa7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Iglc3P01845 104 aa7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Zfp27P10077 819 aa7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 PpyP10601 100 aa7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Csrp2P97314 193 aaKnown RBP7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Srsf6Q3TWW8 339 aaKnown RBP7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Gm1553Q66VB7 94 aa7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Gm9945Q8BNZ3 91 aa7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Rnase2aQ8K196 155 aa7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Olfr33Q8VGX7 318 aa7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Abca7Q91V24 2159 aa7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Mast2Q60592 1734 aa7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Togaram1Q6A070 1776 aaKnown RBP7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 2410004P03RikA0A087WQY2 205 aa7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 CfdP03953 259 aa7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Pet100P0DJE0 76 aa7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Gm10842Q3U587 122 aa7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 9930021J03RikH3BKP8 2027 aa7.68□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Pglyrp3A1A547 347 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Gm17727E9Q4V7 109 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Sdr39u1Q5M8N4 308 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Pxt1Q8K459 51 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Abca1P41233 2261 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Scn9aQ62205 1984 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 TtrP07309 147 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Atp5g2P56383 146 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Dnase2P56542 353 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Gm9881Q8BR56 211 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Cep295Q8BQ48 2412 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Ankrd12G5E893 2041 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Gm21974F6W3F3 119 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Zfp977L7N2E7 438 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Olfr317Q5NCD6 327 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Trav3-1Q5R1I8 114 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Msrb2Q78J03 175 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Dmrt3Q80WT2 476 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Iba57Q8CAK1 358 aaKnown RBP7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Olfr477Q8VGI6 310 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Rtn4rQ99PI8 473 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Mfap4Q9D1H9 257 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Slamf6Q9ET39 351 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Lamtor2Q9JHS3 125 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Snrnp200Q6P4T2 2136 aaKnown RBP7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Scn8aQ9WTU3 1978 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Tdrd6P61407 2134 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Cabin1G3X8Q1 2187 aaKnown RBP7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Ighv1-37A0A0A6YW32 117 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Vmn1r1E9PVR6 306 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Ly6aP05533 134 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Gm11110Q3U4K9 109 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 C1ql2Q8CFR0 287 aa7.67□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Olfr1337A2ACY8 315 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Rnase2O35291 155 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Prima1Q810F0 153 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Gnb1lQ9EQ15 326 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Plekhb2Q9QZC7 221 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Cxcl14Q9WUQ5 99 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Shank1D3YZU1 2167 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Trdv1A0A075B657 112 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Ighv1-20A0A0A6YX66 117 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Defa28D3Z1V9 94 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Klk1b4P00757 256 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 P01723 117 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Gm10803Q3TZS6 135 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Gm7489Q3UT34 171 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Gm12888Q3UW77 119 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Gm4792Q569Q2 183 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Defa25Q5G864 92 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Sp9Q64HY3 484 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Mex3bQ69Z36 601 aaKnown RBP7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Opn3Q9WUK7 400 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Defa7P50705 93 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 HrkP62816 92 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Gm10645Q3UPY1 145 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Fam168aQ8BGZ2 244 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Il19Q8CJ70 176 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 PikfyveQ9Z1T6 2097 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Siglec15A7E1W8 342 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Spsb3Q571F5 354 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Lrrc25Q8K1T1 297 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Scrt1Q99M85 348 aa7.66□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Olfr779E9PUS9 130 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Ntn1O09118 604 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Klk14Q8CGR5 250 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Tmem129Q8K304 362 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Il1f10Q8R459 152 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Hist1h2bmP10854 126 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Defa4P28311 92 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 VwceQ3U515 929 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Hist1h2bhQ64478 126 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Hist2h2bbQ64525 126 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Hist1h2bcQ6ZWY9 126 aaKnown RBP7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Spink6Q8BT20 105 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Higd1aQ9JLR9 95 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Hs3st3b1Q9QZS6 390 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Ighv1-22A0A075B5U7 117 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Igkv6-14A0A140T8P1 115 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 1500009C09RikD3YYW9 81 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Gm19345G3UYD9 124 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Ca2P00920 260 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms