RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 PKHD1P08F94 4074 aa18.05■□□□□ 0.48
VEGFA-231ENST00000640499 TRAV8-6A0A0B4J262 113 aa18.05■□□□□ 0.48
VEGFA-231ENST00000640499 MGPP08493 103 aa18.05■□□□□ 0.48
VEGFA-231ENST00000640499 LINC01556Q5JQF7 62 aa18.05■□□□□ 0.48
VEGFA-231ENST00000640499 Q8N3U1 123 aa18.05■□□□□ 0.48
VEGFA-231ENST00000640499 TRGC1P0CF51 173 aa18.04■□□□□ 0.48
VEGFA-231ENST00000640499 BTF3P20290 206 aaKnown RBP18.04■□□□□ 0.48
VEGFA-231ENST00000640499 ADIRFQ15847 76 aa18.04■□□□□ 0.48
VEGFA-231ENST00000640499 DPH3P1Q9H4G8 78 aa18.04■□□□□ 0.48
VEGFA-231ENST00000640499 GFRA4Q9GZZ7 299 aa18.03■□□□□ 0.48
VEGFA-231ENST00000640499 HIGD1CA8MV81 97 aa18.01■□□□□ 0.47
VEGFA-231ENST00000640499 C15orf54Q8N8G6 183 aa18.01■□□□□ 0.47
VEGFA-231ENST00000640499 TRAV9-2A0A087WT02 112 aa18■□□□□ 0.47
VEGFA-231ENST00000640499 FAM231BA6NCW3 169 aa18■□□□□ 0.47
VEGFA-231ENST00000640499 K7EP13 123 aa18■□□□□ 0.47
VEGFA-231ENST00000640499 A0A087WWC5 75 aa17.99■□□□□ 0.47
VEGFA-231ENST00000640499 IGHV3-30P01768 117 aa17.99■□□□□ 0.47
VEGFA-231ENST00000640499 IGHV3-33P01772 117 aa17.99■□□□□ 0.47
VEGFA-231ENST00000640499 IGHV3-30-3P0DP02 117 aa17.99■□□□□ 0.47
VEGFA-231ENST00000640499 IGHV3-30-5P0DP03 117 aa17.99■□□□□ 0.47
VEGFA-231ENST00000640499 NTM-AS1Q6ZSK4 140 aa17.97■□□□□ 0.47
VEGFA-231ENST00000640499 GATD1Q8NB37 220 aa17.97■□□□□ 0.47
VEGFA-231ENST00000640499 NUP35Q8NFH5 326 aa17.97■□□□□ 0.47
VEGFA-231ENST00000640499 RASL11AQ6T310 242 aa17.96■□□□□ 0.47
VEGFA-231ENST00000640499 DNAJC30Q96LL9 226 aa17.96■□□□□ 0.47
VEGFA-231ENST00000640499 TRAV26-2A0A0B4J265 109 aa17.95■□□□□ 0.46
VEGFA-231ENST00000640499 A0A1B0GUT8 65 aa17.95■□□□□ 0.46
VEGFA-231ENST00000640499 IBA57-AS1B1ANH7 110 aa17.95■□□□□ 0.46
VEGFA-231ENST00000640499 NIT1Q86X76 327 aa17.95■□□□□ 0.46
VEGFA-231ENST00000640499 TRBV6-8A0A0A6YYG3 113 aa17.94■□□□□ 0.46
VEGFA-231ENST00000640499 SMIM27A0A1W2PRY6 76 aa17.94■□□□□ 0.46
VEGFA-231ENST00000640499 H7C1H1 209 aa17.94■□□□□ 0.46
VEGFA-231ENST00000640499 C10orf126Q8N4M7 172 aa17.94■□□□□ 0.46
VEGFA-231ENST00000640499 DAZ4Q86SG3 579 aaKnown RBP17.93■□□□□ 0.46
VEGFA-231ENST00000640499 NIT2Q9NQR4 276 aa17.93■□□□□ 0.46
VEGFA-231ENST00000640499 DAZ3Q9NR90 486 aaKnown RBP17.93■□□□□ 0.46
VEGFA-231ENST00000640499 GAS8-AS1O95177 125 aa17.91■□□□□ 0.46
VEGFA-231ENST00000640499 RNF185Q96GF1 192 aa17.91■□□□□ 0.46
VEGFA-231ENST00000640499 BORCS7Q96B45 105 aa17.9■□□□□ 0.46
VEGFA-231ENST00000640499 NAT8BQ9UHF3 227 aa17.9■□□□□ 0.46
VEGFA-231ENST00000640499 DNAH5Q8TE73 4624 aa17.9■□□□□ 0.46
VEGFA-231ENST00000640499 NFE4Q86UQ8 179 aa17.89■□□□□ 0.45
VEGFA-231ENST00000640499 RPL39LQ96EH5 51 aaKnown RBP17.89■□□□□ 0.45
VEGFA-231ENST00000640499 TMEM191AQ9H0A3 160 aa17.89■□□□□ 0.45
VEGFA-231ENST00000640499 KIAA1109Q2LD37 5005 aa17.89■□□□□ 0.45
VEGFA-231ENST00000640499 SMIM15Q7Z3B0 74 aa17.88■□□□□ 0.45
VEGFA-231ENST00000640499 ADCYAP1P18509 176 aa17.87■□□□□ 0.45
VEGFA-231ENST00000640499 RIGQ13278 110 aa17.87■□□□□ 0.45
VEGFA-231ENST00000640499 RAB4AP20338 218 aa17.86■□□□□ 0.45
VEGFA-231ENST00000640499 DEFB104AQ8WTQ1 72 aa17.86■□□□□ 0.45
VEGFA-231ENST00000640499 FRZBQ92765 325 aa17.86■□□□□ 0.45
VEGFA-231ENST00000640499 UQCC3Q6UW78 93 aa17.85■□□□□ 0.45
VEGFA-231ENST00000640499 AMN1Q8IY45 258 aa17.85■□□□□ 0.45
VEGFA-231ENST00000640499 Q9HAA7 133 aa17.85■□□□□ 0.45
VEGFA-231ENST00000640499 LRP1BQ9NZR2 4599 aa17.84■□□□□ 0.45
VEGFA-231ENST00000640499 LAGE3Q14657 143 aa17.84■□□□□ 0.45
VEGFA-231ENST00000640499 IQCJQ1A5X6 159 aa17.84■□□□□ 0.45
VEGFA-231ENST00000640499 TMEM97Q5BJF2 176 aa17.84■□□□□ 0.45
VEGFA-231ENST00000640499 TMEM218A2RU14 115 aa17.83■□□□□ 0.44
VEGFA-231ENST00000640499 PNRC1Q12796 327 aaPredicted RBP17.83■□□□□ 0.44
VEGFA-231ENST00000640499 KRTAP10-2P60368 255 aa17.82■□□□□ 0.44
VEGFA-231ENST00000640499 MPV17L2Q567V2 206 aa17.82■□□□□ 0.44
VEGFA-231ENST00000640499 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.82■□□□□ 0.44
VEGFA-231ENST00000640499 CHCHD7Q9BUK0 85 aa17.82■□□□□ 0.44
VEGFA-231ENST00000640499 KLK12Q9UKR0 248 aa17.82■□□□□ 0.44
VEGFA-231ENST00000640499 TMEM262E9PQX1 116 aa17.81■□□□□ 0.44
VEGFA-231ENST00000640499 CHCHD5Q9BSY4 110 aa17.81■□□□□ 0.44
VEGFA-231ENST00000640499 URGCP-MRPS24S4R325 110 aa17.81■□□□□ 0.44
VEGFA-231ENST00000640499 TRBV25-1A0A075B6N4 114 aa17.8■□□□□ 0.44
VEGFA-231ENST00000640499 A0A087WTM6 91 aa17.8■□□□□ 0.44
VEGFA-231ENST00000640499 A0A087WX48 190 aa17.8■□□□□ 0.44
VEGFA-231ENST00000640499 RPS10P46783 165 aaKnown RBP17.8■□□□□ 0.44
VEGFA-231ENST00000640499 ATRAIDQ6UW56 229 aa17.8■□□□□ 0.44
VEGFA-231ENST00000640499 SPATA12Q7Z6I5 190 aa17.8■□□□□ 0.44
VEGFA-231ENST00000640499 COMMD7Q86VX2 200 aa17.8■□□□□ 0.44
VEGFA-231ENST00000640499 IGHV1-24A0A0C4DH33 117 aa17.79■□□□□ 0.44
VEGFA-231ENST00000640499 TRBV6-5A0A0K0K1A5 114 aa17.79■□□□□ 0.44
VEGFA-231ENST00000640499 A0A1B0GXF2 115 aa17.79■□□□□ 0.44
VEGFA-231ENST00000640499 LINC00862A6NCI5 91 aa17.79■□□□□ 0.44
VEGFA-231ENST00000640499 LRCOL1A6NCL2 159 aa17.79■□□□□ 0.44
VEGFA-231ENST00000640499 PPP1R2P9O14990 202 aa17.79■□□□□ 0.44
VEGFA-231ENST00000640499 GAGE6Q13070 117 aa17.79■□□□□ 0.44
VEGFA-231ENST00000640499 Q8N976 141 aa17.79■□□□□ 0.44
VEGFA-231ENST00000640499 HERC2O95714 4834 aa17.78■□□□□ 0.44
VEGFA-231ENST00000640499 CAMPP49913 170 aa17.78■□□□□ 0.44
VEGFA-231ENST00000640499 SMKR1H3BMG3 65 aa17.77■□□□□ 0.44
VEGFA-231ENST00000640499 FAM104BQ5XKR9 115 aa17.77■□□□□ 0.44
VEGFA-231ENST00000640499 MRPL54Q6P161 138 aaKnown RBP17.77■□□□□ 0.44
VEGFA-231ENST00000640499 MAPKAPK5-AS1Q8N8E1 139 aa17.77■□□□□ 0.44
VEGFA-231ENST00000640499 MRAP2Q96G30 205 aa17.77■□□□□ 0.44
VEGFA-231ENST00000640499 TRAV8-3A0A0A6YYJ7 113 aa17.76■□□□□ 0.43
VEGFA-231ENST00000640499 SDHAF1A6NFY7 115 aa17.76■□□□□ 0.43
VEGFA-231ENST00000640499 FUSP35637 526 aaKnown RBP eCLIP17.76■□□□□ 0.433e-8■□□□□ 10.5
VEGFA-231ENST00000640499 RBX1P62877 108 aa17.76■□□□□ 0.43
VEGFA-231ENST00000640499 KCNIP4Q6PIL6 250 aa17.76■□□□□ 0.43
VEGFA-231ENST00000640499 ENHOQ6UWT2 76 aa17.76■□□□□ 0.43
VEGFA-231ENST00000640499 NCR2O95944 276 aa17.75■□□□□ 0.43
VEGFA-231ENST00000640499 MT-ND4LP03901 98 aa17.75■□□□□ 0.43
VEGFA-231ENST00000640499 MRPL51Q4U2R6 128 aaKnown RBP17.75■□□□□ 0.43
VEGFA-231ENST00000640499 NRACQ8N912 160 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms