RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 IGHV3-33P01772 117 aa8.09□□□□□ -1.11
SNIP1-204ENST00000638725 TRPT1Q86TN4 253 aaKnown RBP8.09□□□□□ -1.11
SNIP1-204ENST00000638725 A0A0J9YXV3 536 aa8.08□□□□□ -1.12
SNIP1-204ENST00000638725 UCNP55089 124 aa8.08□□□□□ -1.12
SNIP1-204ENST00000638725 MUSTN1Q8IVN3 82 aa8.08□□□□□ -1.12
SNIP1-204ENST00000638725 VPS13CQ709C8 3753 aa8.08□□□□□ -1.12
SNIP1-204ENST00000638725 TRAV26-1A0A087WT03 109 aa8.08□□□□□ -1.12
SNIP1-204ENST00000638725 C9JAW5 83 aa8.08□□□□□ -1.12
SNIP1-204ENST00000638725 RHODO00212 210 aa8.08□□□□□ -1.12
SNIP1-204ENST00000638725 SLC25A20O43772 301 aa8.08□□□□□ -1.12
SNIP1-204ENST00000638725 RHOHQ15669 191 aa8.08□□□□□ -1.12
SNIP1-204ENST00000638725 SPINK13Q1W4C9 94 aa8.08□□□□□ -1.12
SNIP1-204ENST00000638725 C20orf203Q8NBC4 194 aa8.08□□□□□ -1.12
SNIP1-204ENST00000638725 TMEM263Q8WUH6 116 aaKnown RBP8.08□□□□□ -1.12
SNIP1-204ENST00000638725 K7EMT4 169 aa8.07□□□□□ -1.12
SNIP1-204ENST00000638725 A0A0J9YX75 114 aa8.07□□□□□ -1.12
SNIP1-204ENST00000638725 CFHR3Q02985 330 aa8.07□□□□□ -1.12
SNIP1-204ENST00000638725 C10orf99Q6UWK7 81 aa8.07□□□□□ -1.12
SNIP1-204ENST00000638725 IGLV4-3A0A075B6K6 122 aa8.06□□□□□ -1.12
SNIP1-204ENST00000638725 IGHV1OR15-1A0A075B7D0 117 aa8.06□□□□□ -1.12
SNIP1-204ENST00000638725 LY6DQ14210 128 aa8.06□□□□□ -1.12
SNIP1-204ENST00000638725 ERG28Q9UKR5 140 aa8.06□□□□□ -1.12
SNIP1-204ENST00000638725 COL12A1Q99715 3063 aa8.06□□□□□ -1.12
SNIP1-204ENST00000638725 ADARB2-AS1A8MUL3 147 aa8.06□□□□□ -1.12
SNIP1-204ENST00000638725 ELANEP08246 267 aa8.06□□□□□ -1.12
SNIP1-204ENST00000638725 A0A0B4J2C4 111 aa8.05□□□□□ -1.12
SNIP1-204ENST00000638725 PIMREGQ9BSJ6 248 aa8.05□□□□□ -1.12
SNIP1-204ENST00000638725 VCX2Q9H322 139 aa8.05□□□□□ -1.12
SNIP1-204ENST00000638725 I3L3M4 83 aa8.05□□□□□ -1.12
SNIP1-204ENST00000638725 Q1RN00 199 aa8.05□□□□□ -1.12
SNIP1-204ENST00000638725 ODF3Q96PU9 254 aa8.05□□□□□ -1.12
SNIP1-204ENST00000638725 A0A0J9YXY3 114 aa8.05□□□□□ -1.12
SNIP1-204ENST00000638725 SPXQ9BT56 116 aa8.05□□□□□ -1.12
SNIP1-204ENST00000638725 M0R2P5 195 aa8.04□□□□□ -1.12
SNIP1-204ENST00000638725 SNRPD3P62318 126 aaKnown RBP8.04□□□□□ -1.12
SNIP1-204ENST00000638725 IGHV3-73A0A0B4J1V6 119 aa8.04□□□□□ -1.12
SNIP1-204ENST00000638725 K7EQG2 157 aa8.04□□□□□ -1.12
SNIP1-204ENST00000638725 CEMP1Q6PRD7 247 aaPredicted RBP8.04□□□□□ -1.12
SNIP1-204ENST00000638725 C10orf105Q8TEF2 133 aa8.04□□□□□ -1.12
SNIP1-204ENST00000638725 BEX4Q9NWD9 120 aaPredicted RBP8.04□□□□□ -1.12
SNIP1-204ENST00000638725 TRAV8-3A0A0A6YYJ7 113 aa8.03□□□□□ -1.12
SNIP1-204ENST00000638725 AVPP01185 164 aa8.03□□□□□ -1.12
SNIP1-204ENST00000638725 IGHV3-30-3P0DP02 117 aa8.03□□□□□ -1.12
SNIP1-204ENST00000638725 CD28P10747 220 aa8.03□□□□□ -1.12
SNIP1-204ENST00000638725 PSMB8P28062 276 aa8.03□□□□□ -1.12
SNIP1-204ENST00000638725 RNASE13Q5GAN3 156 aaKnown RBP8.03□□□□□ -1.12
SNIP1-204ENST00000638725 IGHV4-30-2A0A087WSY4 118 aa8.03□□□□□ -1.12
SNIP1-204ENST00000638725 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.03□□□□□ -1.12
SNIP1-204ENST00000638725 PROK1P58294 105 aa8.03□□□□□ -1.12
SNIP1-204ENST00000638725 NTN5Q8WTR8 489 aaPredicted RBP8.03□□□□□ -1.12
SNIP1-204ENST00000638725 FAM104AQ969W3 186 aa8.03□□□□□ -1.12
SNIP1-204ENST00000638725 SORL1Q92673 2214 aa8.02□□□□□ -1.13
SNIP1-204ENST00000638725 LINC01620Q4KN68 170 aa8.02□□□□□ -1.13
SNIP1-204ENST00000638725 RNF183Q96D59 192 aa8.02□□□□□ -1.13
SNIP1-204ENST00000638725 TMEM262E9PQX1 116 aa8.02□□□□□ -1.13
SNIP1-204ENST00000638725 HTN1P15515 57 aa8.02□□□□□ -1.13
SNIP1-204ENST00000638725 DUX5Q96PT3 197 aa8.02□□□□□ -1.13
SNIP1-204ENST00000638725 LITAFQ99732 161 aa8.02□□□□□ -1.13
SNIP1-204ENST00000638725 TIMM21Q9BVV7 248 aa8.02□□□□□ -1.13
SNIP1-204ENST00000638725 TRIAP1O43715 76 aa8.01□□□□□ -1.13
SNIP1-204ENST00000638725 RBMY1A1P0DJD3 496 aaKnown RBP8.01□□□□□ -1.13
SNIP1-204ENST00000638725 RBMY1CP0DJD4 496 aa8.01□□□□□ -1.13
SNIP1-204ENST00000638725 SYNJ2BPP57105 145 aa8.01□□□□□ -1.13
SNIP1-204ENST00000638725 RBMY1FQ15415 496 aaKnown RBP8.01□□□□□ -1.13
SNIP1-204ENST00000638725 ATXN8Q156A1 80 aa8.01□□□□□ -1.13
SNIP1-204ENST00000638725 M0QXV9 152 aa8.01□□□□□ -1.13
SNIP1-204ENST00000638725 MSMBP08118 114 aa8.01□□□□□ -1.13
SNIP1-204ENST00000638725 CCL19Q99731 98 aa8.01□□□□□ -1.13
SNIP1-204ENST00000638725 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.01□□□□□ -1.13
SNIP1-204ENST00000638725 DOPEY2Q9Y3R5 2298 aa8.01□□□□□ -1.13
SNIP1-204ENST00000638725 A8MZ25 164 aa8□□□□□ -1.13
SNIP1-204ENST00000638725 PRSS2P07478 247 aa8□□□□□ -1.13
SNIP1-204ENST00000638725 GNLYP22749 145 aa8□□□□□ -1.13
SNIP1-204ENST00000638725 GATA3P23771 443 aa8□□□□□ -1.13
SNIP1-204ENST00000638725 Q9UF83 564 aa8□□□□□ -1.13
SNIP1-204ENST00000638725 TRGV11A0A075B6L2 103 aa8□□□□□ -1.13
SNIP1-204ENST00000638725 IGHV4-59P01825 116 aa8□□□□□ -1.13
SNIP1-204ENST00000638725 PRM2P04554 102 aa8□□□□□ -1.13
SNIP1-204ENST00000638725 NPC2P61916 151 aa8□□□□□ -1.13
SNIP1-204ENST00000638725 MRPS36P82909 103 aaKnown RBP8□□□□□ -1.13
SNIP1-204ENST00000638725 ADAMTSL4-AS1Q5T5F5 129 aa8□□□□□ -1.13
SNIP1-204ENST00000638725 ZFAND6Q6FIF0 208 aa8□□□□□ -1.13
SNIP1-204ENST00000638725 KNCNA6PVL3 124 aa7.99□□□□□ -1.13
SNIP1-204ENST00000638725 CITED1Q99966 193 aa7.99□□□□□ -1.13
SNIP1-204ENST00000638725 ANAPC13Q9BS18 74 aa7.99□□□□□ -1.13
SNIP1-204ENST00000638725 PRRC2AP48634 2157 aaKnown RBP7.99□□□□□ -1.13
SNIP1-204ENST00000638725 TRBV30A0A0K0K1B3 111 aa7.99□□□□□ -1.13
SNIP1-204ENST00000638725 TEX49A0A1B0GTD5 131 aa7.99□□□□□ -1.13
SNIP1-204ENST00000638725 ATP5J2P56134 94 aa7.99□□□□□ -1.13
SNIP1-204ENST00000638725 Q6ZSV7 163 aa7.99□□□□□ -1.13
SNIP1-204ENST00000638725 TEX29Q8N6K0 151 aa7.99□□□□□ -1.13
SNIP1-204ENST00000638725 NDUFA12Q9UI09 145 aa7.99□□□□□ -1.13
SNIP1-204ENST00000638725 PYGO1Q9Y3Y4 419 aa7.99□□□□□ -1.13
SNIP1-204ENST00000638725 IGHV1-58A0A0C4DH39 117 aa7.98□□□□□ -1.13
SNIP1-204ENST00000638725 CSPG4Q6UVK1 2322 aa7.98□□□□□ -1.13
SNIP1-204ENST00000638725 TRAV4A0A0B4J268 109 aa7.98□□□□□ -1.13
SNIP1-204ENST00000638725 TRBV10-2A0A0K0K1G8 114 aa7.98□□□□□ -1.13
SNIP1-204ENST00000638725 CRLF1O75462 422 aa7.98□□□□□ -1.13
SNIP1-204ENST00000638725 DEFB112Q30KQ8 113 aa7.98□□□□□ -1.13
SNIP1-204ENST00000638725 TNFRSF18Q9Y5U5 241 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms