RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 AP1S3Q96PC3 154 aa11.72□□□□□ -0.53
PNKP-230ENST00000638016 URGCP-MRPS24S4R325 110 aa11.72□□□□□ -0.53
PNKP-230ENST00000638016 TRBV6-8A0A0A6YYG3 113 aa11.71□□□□□ -0.53
PNKP-230ENST00000638016 NKX2-5P52952 324 aaPredicted RBP11.71□□□□□ -0.53
PNKP-230ENST00000638016 NTM-AS1Q6ZSK4 140 aa11.71□□□□□ -0.53
PNKP-230ENST00000638016 TM2D2Q9BX73 214 aa11.71□□□□□ -0.53
PNKP-230ENST00000638016 FAM30AQ9NZY2 134 aa11.71□□□□□ -0.53
PNKP-230ENST00000638016 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.7□□□□□ -0.54
PNKP-230ENST00000638016 IGKV2D-24A0A075B6R9 120 aa11.7□□□□□ -0.54
PNKP-230ENST00000638016 A0A087WX48 190 aa11.7□□□□□ -0.54
PNKP-230ENST00000638016 K7EN84 100 aa11.7□□□□□ -0.54
PNKP-230ENST00000638016 P01737 135 aa11.7□□□□□ -0.54
PNKP-230ENST00000638016 SMR3BP02814 79 aaPredicted RBP11.7□□□□□ -0.54
PNKP-230ENST00000638016 MPV17L2Q567V2 206 aa11.7□□□□□ -0.54
PNKP-230ENST00000638016 NTN5Q8WTR8 489 aaPredicted RBP11.7□□□□□ -0.54
PNKP-230ENST00000638016 A0A1B0GVG6 124 aa11.69□□□□□ -0.54
PNKP-230ENST00000638016 TMEM262E9PQX1 116 aa11.69□□□□□ -0.54
PNKP-230ENST00000638016 SMIM17P0DL12 118 aa11.69□□□□□ -0.54
PNKP-230ENST00000638016 RPS20P60866 119 aaKnown RBP11.69□□□□□ -0.54
PNKP-230ENST00000638016 LINC01620Q4KN68 170 aa11.69□□□□□ -0.54
PNKP-230ENST00000638016 TOR2AQ5JU69 321 aa11.69□□□□□ -0.54
PNKP-230ENST00000638016 SUMO4Q6EEV6 95 aa11.69□□□□□ -0.54
PNKP-230ENST00000638016 LYZL1Q6UWQ5 148 aa11.69□□□□□ -0.54
PNKP-230ENST00000638016 NUDT10Q8NFP7 164 aa11.69□□□□□ -0.54
PNKP-230ENST00000638016 SMIM12Q96EX1 92 aa11.69□□□□□ -0.54
PNKP-230ENST00000638016 NUDT11Q96G61 164 aa11.69□□□□□ -0.54
PNKP-230ENST00000638016 RNASE7Q9H1E1 156 aaKnown RBP11.69□□□□□ -0.54
PNKP-230ENST00000638016 EPM2AB3EWF7 344 aa11.68□□□□□ -0.54
PNKP-230ENST00000638016 Q8N976 141 aa11.68□□□□□ -0.54
PNKP-230ENST00000638016 DEFB104AQ8WTQ1 72 aa11.68□□□□□ -0.54
PNKP-230ENST00000638016 M0QY20 66 aa11.67□□□□□ -0.54
PNKP-230ENST00000638016 ENHOQ6UWT2 76 aa11.67□□□□□ -0.54
PNKP-230ENST00000638016 C15orf54Q8N8G6 183 aa11.67□□□□□ -0.54
PNKP-230ENST00000638016 OCC1Q8TAD7 63 aa11.67□□□□□ -0.54
PNKP-230ENST00000638016 CACNG7P62955 275 aa11.66□□□□□ -0.54
PNKP-230ENST00000638016 Q5VSD8 79 aa11.66□□□□□ -0.54
PNKP-230ENST00000638016 CHCHD5Q9BSY4 110 aa11.66□□□□□ -0.54
PNKP-230ENST00000638016 CHCHD7Q9BUK0 85 aa11.66□□□□□ -0.54
PNKP-230ENST00000638016 NTF3P20783 257 aa11.65□□□□□ -0.54
PNKP-230ENST00000638016 CLPSL2Q6UWE3 100 aa11.65□□□□□ -0.54
PNKP-230ENST00000638016 ANGP03950 147 aaKnown RBP11.64□□□□□ -0.55
PNKP-230ENST00000638016 CTRLP40313 264 aa11.64□□□□□ -0.55
PNKP-230ENST00000638016 GAGE6Q13070 117 aa11.64□□□□□ -0.55
PNKP-230ENST00000638016 KCNIP4Q6PIL6 250 aa11.64□□□□□ -0.55
PNKP-230ENST00000638016 ATRAIDQ6UW56 229 aa11.64□□□□□ -0.55
PNKP-230ENST00000638016 RPP21Q9H633 154 aaKnown RBP11.64□□□□□ -0.55
PNKP-230ENST00000638016 XKRY2A2RUG3 117 aa11.63□□□□□ -0.55
PNKP-230ENST00000638016 F2Z2F3 143 aa11.63□□□□□ -0.55
PNKP-230ENST00000638016 TAGLN2P37802 199 aaKnown RBP11.63□□□□□ -0.55
PNKP-230ENST00000638016 CEBPGP53567 150 aa11.63□□□□□ -0.55
PNKP-230ENST00000638016 LYPD6BQ8NI32 183 aa11.63□□□□□ -0.55
PNKP-230ENST00000638016 RMI2Q96E14 147 aa11.63□□□□□ -0.55
PNKP-230ENST00000638016 TMEM70Q9BUB7 260 aa11.63□□□□□ -0.55
PNKP-230ENST00000638016 BIN3Q9NQY0 253 aa11.63□□□□□ -0.55
PNKP-230ENST00000638016 VPS13BQ7Z7G8 4022 aa11.63□□□□□ -0.55
PNKP-230ENST00000638016 BLOC1S1P78537 153 aa11.62□□□□□ -0.55
PNKP-230ENST00000638016 ELOBQ15370 118 aa11.62□□□□□ -0.55
PNKP-230ENST00000638016 GTSF1Q8WW33 167 aa11.62□□□□□ -0.55
PNKP-230ENST00000638016 DPH3P1Q9H4G8 78 aa11.62□□□□□ -0.55
PNKP-230ENST00000638016 FLG2Q5D862 2391 aaPredicted RBP11.62□□□□□ -0.55
PNKP-230ENST00000638016 TRAV26-2A0A0B4J265 109 aa11.61□□□□□ -0.55
PNKP-230ENST00000638016 CRPP02741 224 aa11.61□□□□□ -0.55
PNKP-230ENST00000638016 FOXA3P55318 350 aaPredicted RBP11.61□□□□□ -0.55
PNKP-230ENST00000638016 RBX1P62877 108 aa11.61□□□□□ -0.55
PNKP-230ENST00000638016 FRZBQ92765 325 aa11.61□□□□□ -0.55
PNKP-230ENST00000638016 C1orf43Q9BWL3 253 aa11.61□□□□□ -0.55
PNKP-230ENST00000638016 COX11Q9Y6N1 276 aa11.61□□□□□ -0.55
PNKP-230ENST00000638016 TRBV25-1A0A075B6N4 114 aa11.6□□□□□ -0.55
PNKP-230ENST00000638016 TRGC1P0CF51 173 aa11.6□□□□□ -0.55
PNKP-230ENST00000638016 TWIST1Q15672 202 aa11.6□□□□□ -0.55
PNKP-230ENST00000638016 RASL11AQ6T310 242 aa11.6□□□□□ -0.55
PNKP-230ENST00000638016 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.6□□□□□ -0.55
PNKP-230ENST00000638016 TMEM250H0YL14 139 aa11.59□□□□□ -0.55
PNKP-230ENST00000638016 H7C1H1 209 aa11.59□□□□□ -0.55
PNKP-230ENST00000638016 HLA-DQA1P01909 254 aa11.59□□□□□ -0.55
PNKP-230ENST00000638016 Q0VG73 95 aa11.59□□□□□ -0.55
PNKP-230ENST00000638016 IQCJQ1A5X6 159 aa11.59□□□□□ -0.55
PNKP-230ENST00000638016 Q6ZSA8 131 aa11.59□□□□□ -0.55
PNKP-230ENST00000638016 CNFNQ9BYD5 112 aa11.59□□□□□ -0.55
PNKP-230ENST00000638016 IGHV1-24A0A0C4DH33 117 aa11.58□□□□□ -0.56
PNKP-230ENST00000638016 INAFM2P0DMQ5 153 aa11.58□□□□□ -0.56
PNKP-230ENST00000638016 TMEM97Q5BJF2 176 aa11.58□□□□□ -0.56
PNKP-230ENST00000638016 LINC00269Q8N2A0 174 aa11.58□□□□□ -0.56
PNKP-230ENST00000638016 GFRA4Q9GZZ7 299 aa11.58□□□□□ -0.56
PNKP-230ENST00000638016 MYCBP2O75592 4640 aa11.57□□□□□ -0.56
PNKP-230ENST00000638016 GATCO43716 136 aaKnown RBP11.57□□□□□ -0.56
PNKP-230ENST00000638016 KRTAP26-1Q6PEX3 210 aa11.57□□□□□ -0.56
PNKP-230ENST00000638016 GATD1Q8NB37 220 aa11.57□□□□□ -0.56
PNKP-230ENST00000638016 C20orf203Q8NBC4 194 aa11.57□□□□□ -0.56
PNKP-230ENST00000638016 RPL39LQ96EH5 51 aaKnown RBP11.57□□□□□ -0.56
PNKP-230ENST00000638016 PGLYRP4Q96LB8 373 aa11.57□□□□□ -0.56
PNKP-230ENST00000638016 NIT2Q9NQR4 276 aa11.57□□□□□ -0.56
PNKP-230ENST00000638016 IGLV4-60A0A075B6I1 120 aa11.56□□□□□ -0.56
PNKP-230ENST00000638016 WDR73Q6P4I2 378 aa11.56□□□□□ -0.56
PNKP-230ENST00000638016 EIF5A2Q9GZV4 153 aaKnown RBP11.56□□□□□ -0.56
PNKP-230ENST00000638016 PRR34Q9NV39 138 aa11.56□□□□□ -0.56
PNKP-230ENST00000638016 HERC1Q15751 4861 aa11.55□□□□□ -0.56
PNKP-230ENST00000638016 USP17L23D6RBM5 183 aa11.55□□□□□ -0.56
PNKP-230ENST00000638016 TMEM243Q9BU79 118 aa11.55□□□□□ -0.56
PNKP-230ENST00000638016 IGLV10-54A0A075B6I4 117 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms