RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 DERL1Q9BUN8 251 aa13.17□□□□□ -0.3
CLN6-222ENST00000637667 TRAV1-1A0A0B4J248 108 aa13.16□□□□□ -0.3
CLN6-222ENST00000637667 C15orf54Q8N8G6 183 aa13.16□□□□□ -0.3
CLN6-222ENST00000637667 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.16□□□□□ -0.3
CLN6-222ENST00000637667 MPV17L2Q567V2 206 aa13.15□□□□□ -0.3
CLN6-222ENST00000637667 ENHOQ6UWT2 76 aa13.15□□□□□ -0.3
CLN6-222ENST00000637667 AP1S3Q96PC3 154 aa13.15□□□□□ -0.3
CLN6-222ENST00000637667 CHCHD5Q9BSY4 110 aa13.15□□□□□ -0.3
CLN6-222ENST00000637667 C1orf43Q9BWL3 253 aa13.15□□□□□ -0.3
CLN6-222ENST00000637667 KIF25-AS1Q9Y6Z4 181 aa13.15□□□□□ -0.3
CLN6-222ENST00000637667 CRPP02741 224 aa13.14□□□□□ -0.31
CLN6-222ENST00000637667 SMIM17P0DL12 118 aa13.14□□□□□ -0.31
CLN6-222ENST00000637667 RAB5CP51148 216 aa13.14□□□□□ -0.31
CLN6-222ENST00000637667 PKIAP61925 76 aa13.14□□□□□ -0.31
CLN6-222ENST00000637667 CENPWQ5EE01 88 aa13.14□□□□□ -0.31
CLN6-222ENST00000637667 LINC00528Q8N1L1 170 aa13.14□□□□□ -0.31
CLN6-222ENST00000637667 VAX2Q9UIW0 290 aa13.14□□□□□ -0.31
CLN6-222ENST00000637667 ANGP03950 147 aaKnown RBP13.13□□□□□ -0.31
CLN6-222ENST00000637667 PLA2G1BP04054 148 aaKnown RBP13.13□□□□□ -0.31
CLN6-222ENST00000637667 TMEM97Q5BJF2 176 aa13.13□□□□□ -0.31
CLN6-222ENST00000637667 GZMBP10144 247 aa13.12□□□□□ -0.31
CLN6-222ENST00000637667 C14orf177Q52M58 125 aa13.12□□□□□ -0.31
CLN6-222ENST00000637667 EIF5AL1Q6IS14 154 aaKnown RBP13.12□□□□□ -0.31
CLN6-222ENST00000637667 NTM-AS1Q6ZSK4 140 aa13.12□□□□□ -0.31
CLN6-222ENST00000637667 SCXQ7RTU7 201 aa13.12□□□□□ -0.31
CLN6-222ENST00000637667 DAZAP1Q96EP5 407 aaKnown RBP13.12□□□□□ -0.31
CLN6-222ENST00000637667 TPPP3Q9BW30 176 aa13.12□□□□□ -0.31
CLN6-222ENST00000637667 TEX46H3BTG2 121 aa13.11□□□□□ -0.31
CLN6-222ENST00000637667 IGLV2-8P01709 118 aa13.11□□□□□ -0.31
CLN6-222ENST00000637667 RPS20P60866 119 aaKnown RBP13.11□□□□□ -0.31
CLN6-222ENST00000637667 FER1L6-AS1Q8NA97 138 aa13.11□□□□□ -0.31
CLN6-222ENST00000637667 OR2D3Q8NGH3 330 aa13.11□□□□□ -0.31
CLN6-222ENST00000637667 IGLC6P0CF74 106 aa13.1□□□□□ -0.31
CLN6-222ENST00000637667 CHAC1Q9BUX1 264 aa13.1□□□□□ -0.31
CLN6-222ENST00000637667 RAB19A4D1S5 217 aa13.09□□□□□ -0.31
CLN6-222ENST00000637667 C19orf71A6NCJ1 209 aa13.09□□□□□ -0.31
CLN6-222ENST00000637667 SULT1A2P50226 295 aa13.09□□□□□ -0.31
CLN6-222ENST00000637667 MIAQ16674 131 aa13.09□□□□□ -0.31
CLN6-222ENST00000637667 M0QY20 66 aa13.08□□□□□ -0.32
CLN6-222ENST00000637667 MGPP08493 103 aa13.08□□□□□ -0.32
CLN6-222ENST00000637667 GNG4P50150 75 aa13.08□□□□□ -0.32
CLN6-222ENST00000637667 RBX1P62877 108 aa13.08□□□□□ -0.32
CLN6-222ENST00000637667 CACNG7P62955 275 aa13.08□□□□□ -0.32
CLN6-222ENST00000637667 MEF2BQ02080 365 aaPredicted RBP13.08□□□□□ -0.32
CLN6-222ENST00000637667 GAGE6Q13070 117 aa13.08□□□□□ -0.32
CLN6-222ENST00000637667 SMIM12Q96EX1 92 aa13.08□□□□□ -0.32
CLN6-222ENST00000637667 TRBV25-1A0A075B6N4 114 aa13.07□□□□□ -0.32
CLN6-222ENST00000637667 H7C1H1 209 aa13.07□□□□□ -0.32
CLN6-222ENST00000637667 PDE6DO43924 150 aa13.07□□□□□ -0.32
CLN6-222ENST00000637667 HLA-DQA1P01909 254 aa13.07□□□□□ -0.32
CLN6-222ENST00000637667 PRR34Q9NV39 138 aa13.07□□□□□ -0.32
CLN6-222ENST00000637667 XKRY2A2RUG3 117 aa13.06□□□□□ -0.32
CLN6-222ENST00000637667 USP17L23D6RBM5 183 aa13.06□□□□□ -0.32
CLN6-222ENST00000637667 P01737 135 aa13.06□□□□□ -0.32
CLN6-222ENST00000637667 IQCJQ1A5X6 159 aa13.06□□□□□ -0.32
CLN6-222ENST00000637667 SUMO4Q6EEV6 95 aa13.06□□□□□ -0.32
CLN6-222ENST00000637667 MED9Q9NWA0 146 aa13.06□□□□□ -0.32
CLN6-222ENST00000637667 TRBV20OR9-2A0A075B6H5 130 aa13.05□□□□□ -0.32
CLN6-222ENST00000637667 IGHV1-24A0A0C4DH33 117 aa13.05□□□□□ -0.32
CLN6-222ENST00000637667 J3QL48 77 aa13.05□□□□□ -0.32
CLN6-222ENST00000637667 IFNA1P01562 189 aa13.05□□□□□ -0.32
CLN6-222ENST00000637667 CLPSL2Q6UWE3 100 aa13.05□□□□□ -0.32
CLN6-222ENST00000637667 LINC00269Q8N2A0 174 aa13.05□□□□□ -0.32
CLN6-222ENST00000637667 CIRBP-AS1Q8TBR5 109 aa13.05□□□□□ -0.32
CLN6-222ENST00000637667 F2Z2F3 143 aa13.04□□□□□ -0.32
CLN6-222ENST00000637667 BCL2P10415 239 aa13.04□□□□□ -0.32
CLN6-222ENST00000637667 DEFB104AQ8WTQ1 72 aa13.04□□□□□ -0.32
CLN6-222ENST00000637667 BIN3Q9NQY0 253 aa13.04□□□□□ -0.32
CLN6-222ENST00000637667 KRTAP26-1Q6PEX3 210 aa13.03□□□□□ -0.32
CLN6-222ENST00000637667 LYZL1Q6UWQ5 148 aa13.03□□□□□ -0.32
CLN6-222ENST00000637667 TCTE3Q8IZS6 198 aa13.03□□□□□ -0.32
CLN6-222ENST00000637667 PRSS1P07477 247 aa13.02□□□□□ -0.33
CLN6-222ENST00000637667 TRGC1P0CF51 173 aa13.02□□□□□ -0.33
CLN6-222ENST00000637667 NKX2-5P52952 324 aaPredicted RBP13.02□□□□□ -0.33
CLN6-222ENST00000637667 RASL11AQ6T310 242 aa13.02□□□□□ -0.33
CLN6-222ENST00000637667 SLC51BQ86UW2 128 aa13.02□□□□□ -0.33
CLN6-222ENST00000637667 DPH3P1Q9H4G8 78 aa13.01□□□□□ -0.33
CLN6-222ENST00000637667 NTF3P20783 257 aa13□□□□□ -0.33
CLN6-222ENST00000637667 C9orf62Q8N4C0 152 aa13□□□□□ -0.33
CLN6-222ENST00000637667 TMEM243Q9BU79 118 aa13□□□□□ -0.33
CLN6-222ENST00000637667 KRTAP29-1A8MX34 341 aaPredicted RBP12.99□□□□□ -0.33
CLN6-222ENST00000637667 TAGLN2P37802 199 aaKnown RBP12.99□□□□□ -0.33
CLN6-222ENST00000637667 CTRLP40313 264 aa12.99□□□□□ -0.33
CLN6-222ENST00000637667 KRTAP10-4P60372 401 aaPredicted RBP12.99□□□□□ -0.33
CLN6-222ENST00000637667 DGAT2L7PQ6IED9 249 aa12.99□□□□□ -0.33
CLN6-222ENST00000637667 WDR73Q6P4I2 378 aa12.99□□□□□ -0.33
CLN6-222ENST00000637667 NUDT10Q8NFP7 164 aa12.99□□□□□ -0.33
CLN6-222ENST00000637667 NUDT11Q96G61 164 aa12.99□□□□□ -0.33
CLN6-222ENST00000637667 NIT2Q9NQR4 276 aa12.99□□□□□ -0.33
CLN6-222ENST00000637667 REG3AQ06141 175 aa12.98□□□□□ -0.33
CLN6-222ENST00000637667 C20orf203Q8NBC4 194 aa12.98□□□□□ -0.33
CLN6-222ENST00000637667 IGLV10-54A0A075B6I4 117 aa12.97□□□□□ -0.33
CLN6-222ENST00000637667 A0A1B0GUV1 79 aa12.97□□□□□ -0.33
CLN6-222ENST00000637667 PGLYRP4Q96LB8 373 aa12.97□□□□□ -0.33
CLN6-222ENST00000637667 CNFNQ9BYD5 112 aa12.97□□□□□ -0.33
CLN6-222ENST00000637667 IGLV4-60A0A075B6I1 120 aa12.96□□□□□ -0.33
CLN6-222ENST00000637667 C9orf163Q8N9P6 203 aa12.96□□□□□ -0.33
CLN6-222ENST00000637667 RPP21Q9H633 154 aaKnown RBP12.96□□□□□ -0.33
CLN6-222ENST00000637667 TRAV8-4A0A0B4J246 113 aa12.95□□□□□ -0.34
CLN6-222ENST00000637667 TWIST1Q15672 202 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms