RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 C20orf144Q9BQM9 153 aa13.64□□□□□ -0.23
CACNA1A-225ENST00000636389 Q6ZS49 121 aa13.64□□□□□ -0.23
CACNA1A-225ENST00000636389 FAM19A1Q7Z5A9 133 aa13.64□□□□□ -0.23
CACNA1A-225ENST00000636389 RPL39P62891 51 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-225ENST00000636389 WISP1O95388 367 aa13.63□□□□□ -0.23
CACNA1A-225ENST00000636389 CRYGDP07320 174 aa13.63□□□□□ -0.23
CACNA1A-225ENST00000636389 ZNF491Q8N8L2 437 aa13.63□□□□□ -0.23
CACNA1A-225ENST00000636389 COL4A5P29400 1685 aa13.63□□□□□ -0.23
CACNA1A-225ENST00000636389 MIR7-3HGQ8N6C7 128 aa13.62□□□□□ -0.23
CACNA1A-225ENST00000636389 CXCL5P42830 114 aa13.62□□□□□ -0.23
CACNA1A-225ENST00000636389 TRAV26-1A0A087WT03 109 aa13.62□□□□□ -0.23
CACNA1A-225ENST00000636389 BLCAPP62952 87 aa13.62□□□□□ -0.23
CACNA1A-225ENST00000636389 SIRPDQ9H106 197 aa13.62□□□□□ -0.23
CACNA1A-225ENST00000636389 Q8N1Y9 231 aa13.61□□□□□ -0.23
CACNA1A-225ENST00000636389 SONP18583 2426 aaKnown RBP13.61□□□□□ -0.23
CACNA1A-225ENST00000636389 AJUBAQ96IF1 538 aa13.61□□□□□ -0.23
CACNA1A-225ENST00000636389 PTPN13Q12923 2485 aa13.61□□□□□ -0.23
CACNA1A-225ENST00000636389 IL15RAQ13261 267 aa13.61□□□□□ -0.23
CACNA1A-225ENST00000636389 AGPAT4-IT1Q9H0P7 198 aa13.61□□□□□ -0.23
CACNA1A-225ENST00000636389 RETNQ9HD89 108 aa13.61□□□□□ -0.23
CACNA1A-225ENST00000636389 FHL1Q13642 323 aa13.61□□□□□ -0.23
CACNA1A-225ENST00000636389 Q6ZR03 302 aa13.61□□□□□ -0.23
CACNA1A-225ENST00000636389 IGHV2-70P01814 119 aa13.6□□□□□ -0.23
CACNA1A-225ENST00000636389 COL4A6Q14031 1691 aa13.6□□□□□ -0.23
CACNA1A-225ENST00000636389 GRNP28799 593 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-225ENST00000636389 ADCYAP1P18509 176 aa13.59□□□□□ -0.23
CACNA1A-225ENST00000636389 A0A0J9YXV3 536 aa13.58□□□□□ -0.23
CACNA1A-225ENST00000636389 PRR4Q16378 134 aa13.58□□□□□ -0.23
CACNA1A-225ENST00000636389 Q6ZVH6 145 aa13.58□□□□□ -0.23
CACNA1A-225ENST00000636389 SCXQ7RTU7 201 aa13.58□□□□□ -0.23
CACNA1A-225ENST00000636389 LINC00311Q8N616 119 aa13.58□□□□□ -0.23
CACNA1A-225ENST00000636389 TMEM263Q8WUH6 116 aaKnown RBP13.58□□□□□ -0.23
CACNA1A-225ENST00000636389 C2orf70A6NJV1 201 aa13.58□□□□□ -0.24
CACNA1A-225ENST00000636389 K7EN84 100 aa13.57□□□□□ -0.24
CACNA1A-225ENST00000636389 M0R2N4 97 aa13.57□□□□□ -0.24
CACNA1A-225ENST00000636389 C4orf3Q8WVX3 66 aa13.57□□□□□ -0.24
CACNA1A-225ENST00000636389 FAM19A5Q7Z5A7 132 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-225ENST00000636389 LINC00269Q8N2A0 174 aa13.57□□□□□ -0.24
CACNA1A-225ENST00000636389 IGHV4-61A0A0C4DH41 118 aa13.57□□□□□ -0.24
CACNA1A-225ENST00000636389 CSRP3P50461 194 aa13.56□□□□□ -0.24
CACNA1A-225ENST00000636389 C9orf85Q96MD7 179 aa13.56□□□□□ -0.24
CACNA1A-225ENST00000636389 ZNF726P1Q15940 193 aa13.56□□□□□ -0.24
CACNA1A-225ENST00000636389 LY6G6EA0A0G2JKS1 128 aa13.55□□□□□ -0.24
CACNA1A-225ENST00000636389 CENPVL3A0A0U1RRI6 287 aa13.55□□□□□ -0.24
CACNA1A-225ENST00000636389 X6R8D5 127 aa13.55□□□□□ -0.24
CACNA1A-225ENST00000636389 C15orf65H3BRN8 121 aa13.54□□□□□ -0.24
CACNA1A-225ENST00000636389 A6NED7 52 aa13.54□□□□□ -0.24
CACNA1A-225ENST00000636389 HILS1P60008 231 aa13.54□□□□□ -0.24
CACNA1A-225ENST00000636389 LENEPQ9Y5L5 61 aa13.53□□□□□ -0.24
CACNA1A-225ENST00000636389 IGLV2-18A0A075B6J9 118 aa13.53□□□□□ -0.24
CACNA1A-225ENST00000636389 ZNF747Q9BV97 191 aa13.53□□□□□ -0.24
CACNA1A-225ENST00000636389 COL4A1P02462 1669 aa13.53□□□□□ -0.24
CACNA1A-225ENST00000636389 TEN1Q86WV5 123 aa13.52□□□□□ -0.24
CACNA1A-225ENST00000636389 RITA1Q96K30 269 aa13.52□□□□□ -0.24
CACNA1A-225ENST00000636389 IGFL3Q6UXB1 125 aa13.52□□□□□ -0.24
CACNA1A-225ENST00000636389 FAM240AA0A1B0GVK7 77 aa13.52□□□□□ -0.25
CACNA1A-225ENST00000636389 PRYO14603 147 aa13.51□□□□□ -0.25
CACNA1A-225ENST00000636389 C5orf56Q8N8D9 126 aa13.51□□□□□ -0.25
CACNA1A-225ENST00000636389 UBE2D2P62837 147 aa13.5□□□□□ -0.25
CACNA1A-225ENST00000636389 SDIM1Q6ZPB5 146 aa13.5□□□□□ -0.25
CACNA1A-225ENST00000636389 LY6G6CO95867 125 aa13.5□□□□□ -0.25
CACNA1A-225ENST00000636389 C16orf54Q6UWD8 224 aa13.5□□□□□ -0.25
CACNA1A-225ENST00000636389 DEFB131BA0A096LNP1 70 aa13.49□□□□□ -0.25
CACNA1A-225ENST00000636389 IGLV9-49A0A0B4J1Y8 123 aa13.49□□□□□ -0.25
CACNA1A-225ENST00000636389 PDE6GP18545 87 aa13.49□□□□□ -0.25
CACNA1A-225ENST00000636389 ZNF503-AS2A6NEH8 195 aa13.49□□□□□ -0.25
CACNA1A-225ENST00000636389 C3orf84H3BNL1 204 aa13.49□□□□□ -0.25
CACNA1A-225ENST00000636389 PPDPFQ9H3Y8 114 aa13.49□□□□□ -0.25
CACNA1A-225ENST00000636389 PRO0255Q9UI72 69 aa13.49□□□□□ -0.25
CACNA1A-225ENST00000636389 IGHV7-81A0A0B4J1V7 117 aa13.48□□□□□ -0.25
CACNA1A-225ENST00000636389 REG3AQ06141 175 aa13.48□□□□□ -0.25
CACNA1A-225ENST00000636389 PIK3CD-AS1Q5SR53 167 aa13.48□□□□□ -0.25
CACNA1A-225ENST00000636389 Q6ZVQ6 151 aa13.48□□□□□ -0.25
CACNA1A-225ENST00000636389 C1orf158Q8N1D5 194 aa13.48□□□□□ -0.25
CACNA1A-225ENST00000636389 TOMM6Q96B49 74 aa13.48□□□□□ -0.25
CACNA1A-225ENST00000636389 MED14OSP0DP75 135 aa13.48□□□□□ -0.25
CACNA1A-225ENST00000636389 WFDC2Q14508 124 aa13.48□□□□□ -0.25
CACNA1A-225ENST00000636389 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.48□□□□□ -0.25
CACNA1A-225ENST00000636389 IGHV1-58A0A0C4DH39 117 aa13.48□□□□□ -0.25
CACNA1A-225ENST00000636389 HIST2H2BDQ6DRA6 164 aa13.48□□□□□ -0.25
CACNA1A-225ENST00000636389 Q6ZUT4 128 aa13.47□□□□□ -0.25
CACNA1A-225ENST00000636389 MDFICQ9P1T7 246 aa13.47□□□□□ -0.25
CACNA1A-225ENST00000636389 MYCNOSP40205 109 aa13.46□□□□□ -0.25
CACNA1A-225ENST00000636389 MSRB1Q9NZV6 116 aa13.46□□□□□ -0.25
CACNA1A-225ENST00000636389 NFE4Q86UQ8 179 aa13.46□□□□□ -0.25
CACNA1A-225ENST00000636389 SERP2Q8N6R1 65 aa13.46□□□□□ -0.25
CACNA1A-225ENST00000636389 P0DMU3 169 aa13.45□□□□□ -0.26
CACNA1A-225ENST00000636389 FAM231AP0DMU4 169 aa13.45□□□□□ -0.26
CACNA1A-225ENST00000636389 FAM231CP0DMU5 169 aa13.45□□□□□ -0.26
CACNA1A-225ENST00000636389 IGLV1-44P01699 117 aa13.45□□□□□ -0.26
CACNA1A-225ENST00000636389 DEFB1P60022 68 aa13.45□□□□□ -0.26
CACNA1A-225ENST00000636389 FAM236DA0A1B0GTK5 79 aa13.45□□□□□ -0.26
CACNA1A-225ENST00000636389 FAM236CP0DP71 79 aa13.45□□□□□ -0.26
CACNA1A-225ENST00000636389 C17orf82Q86X59 251 aaPredicted RBP13.45□□□□□ -0.26
CACNA1A-225ENST00000636389 DCANP1Q8TF63 244 aa13.45□□□□□ -0.26
CACNA1A-225ENST00000636389 FOXL2NBQ6ZUU3 175 aa13.45□□□□□ -0.26
CACNA1A-225ENST00000636389 ENHOQ6UWT2 76 aa13.44□□□□□ -0.26
CACNA1A-225ENST00000636389 NDUFC2-KCTD14E9PQ53 114 aa13.44□□□□□ -0.26
CACNA1A-225ENST00000636389 KAAG1Q9UBP8 84 aa13.44□□□□□ -0.26
CACNA1A-225ENST00000636389 LTBP1Q14766 1721 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms