RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 NCR2O95944 276 aa5.19□□□□□ -1.58
CIITA-214ENST00000636238 GATA1P15976 413 aaPredicted RBP5.19□□□□□ -1.58
CIITA-214ENST00000636238 RAB4AP20338 218 aa5.19□□□□□ -1.58
CIITA-214ENST00000636238 ZNF415Q09FC8 603 aa5.19□□□□□ -1.58
CIITA-214ENST00000636238 TTC32Q5I0X7 151 aa5.19□□□□□ -1.58
CIITA-214ENST00000636238 SMIM15Q7Z3B0 74 aa5.19□□□□□ -1.58
CIITA-214ENST00000636238 TMEM256Q8N2U0 113 aa5.19□□□□□ -1.58
CIITA-214ENST00000636238 C14orf178Q8N769 122 aaPredicted RBP5.19□□□□□ -1.58
CIITA-214ENST00000636238 C11orf72Q8NBR9 251 aa5.19□□□□□ -1.58
CIITA-214ENST00000636238 RNF185Q96GF1 192 aa5.19□□□□□ -1.58
CIITA-214ENST00000636238 LINC00467Q9BRT7 94 aa5.19□□□□□ -1.58
CIITA-214ENST00000636238 ALKBH7Q9BT30 221 aaPredicted RBP5.19□□□□□ -1.58
CIITA-214ENST00000636238 TMEM191AQ9H0A3 160 aa5.19□□□□□ -1.58
CIITA-214ENST00000636238 DKK2Q9UBU2 259 aa5.19□□□□□ -1.58
CIITA-214ENST00000636238 MYCBP2O75592 4640 aa5.18□□□□□ -1.58
CIITA-214ENST00000636238 A0A087WWL8 130 aa5.18□□□□□ -1.58
CIITA-214ENST00000636238 TRAV26-2A0A0B4J265 109 aa5.18□□□□□ -1.58
CIITA-214ENST00000636238 D6R8Y8 96 aa5.18□□□□□ -1.58
CIITA-214ENST00000636238 NUPR1O60356 82 aa5.18□□□□□ -1.58
CIITA-214ENST00000636238 NXPH4O95158 308 aa5.18□□□□□ -1.58
CIITA-214ENST00000636238 MGPP08493 103 aa5.18□□□□□ -1.58
CIITA-214ENST00000636238 PDZD11Q5EBL8 140 aa5.18□□□□□ -1.58
CIITA-214ENST00000636238 SYT8Q8NBV8 401 aa5.18□□□□□ -1.58
CIITA-214ENST00000636238 SAMD10Q9BYL1 202 aa5.18□□□□□ -1.58
CIITA-214ENST00000636238 MRPL16Q9NX20 251 aaKnown RBP5.18□□□□□ -1.58
CIITA-214ENST00000636238 C5orf52A6NGY3 159 aa5.17□□□□□ -1.58
CIITA-214ENST00000636238 INAFM2P0DMQ5 153 aa5.17□□□□□ -1.58
CIITA-214ENST00000636238 HOXA5P20719 270 aa5.17□□□□□ -1.58
CIITA-214ENST00000636238 CKS2P33552 79 aa5.17□□□□□ -1.58
CIITA-214ENST00000636238 CCL18P55774 89 aa5.17□□□□□ -1.58
CIITA-214ENST00000636238 ZNF876PQ49A33 203 aa5.17□□□□□ -1.58
CIITA-214ENST00000636238 BAGE3Q86Y29 109 aa5.17□□□□□ -1.58
CIITA-214ENST00000636238 ZNRF2Q8NHG8 242 aa5.17□□□□□ -1.58
CIITA-214ENST00000636238 C18orf32Q8TCD1 76 aa5.17□□□□□ -1.58
CIITA-214ENST00000636238 PRELID3AQ96N28 172 aa5.17□□□□□ -1.58
CIITA-214ENST00000636238 AP1S3Q96PC3 154 aa5.17□□□□□ -1.58
CIITA-214ENST00000636238 DPH3P1Q9H4G8 78 aa5.17□□□□□ -1.58
CIITA-214ENST00000636238 KIF25-AS1Q9Y6Z4 181 aa5.17□□□□□ -1.58
CIITA-214ENST00000636238 IGHV3-73A0A0B4J1V6 119 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 LOC389332A0A1B0GUA5 103 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 LYRM9A8MSI8 78 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 M0R2P5 195 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 SERF1AO75920 110 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 NPYP01303 97 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 SMIM17P0DL12 118 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 EMP1P54849 157 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 LINC00310P59036 64 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 LINC00315P59091 139 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 Q0VG73 95 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 RRN3P1Q2M238 152 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 FAM74A4Q5TZK3 123 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 FAM222AQ5U5X8 452 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 CDPF1Q6NVV7 123 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 SPATA12Q7Z6I5 190 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 ORMDL3Q8N138 153 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 RNASE8Q8TDE3 154 aaKnown RBP5.16□□□□□ -1.58
CIITA-214ENST00000636238 TMEM263Q8WUH6 116 aaKnown RBP5.16□□□□□ -1.58
CIITA-214ENST00000636238 SPXQ9BT56 116 aa5.16□□□□□ -1.58
CIITA-214ENST00000636238 NOP10Q9NPE3 64 aaKnown RBP5.16□□□□□ -1.58
CIITA-214ENST00000636238 SRRM2Q9UQ35 2752 aaKnown RBP5.15□□□□□ -1.58
CIITA-214ENST00000636238 TRGV1A0A0A0MS02 117 aa5.15□□□□□ -1.59
CIITA-214ENST00000636238 PLAC8L1A1L4L8 177 aa5.15□□□□□ -1.59
CIITA-214ENST00000636238 F5H697 171 aa5.15□□□□□ -1.59
CIITA-214ENST00000636238 CRYGDP07320 174 aa5.15□□□□□ -1.59
CIITA-214ENST00000636238 DAD1P61803 113 aa5.15□□□□□ -1.59
CIITA-214ENST00000636238 OR10J3Q5JRS4 329 aa5.15□□□□□ -1.59
CIITA-214ENST00000636238 COA6Q5JTJ3 125 aaKnown RBP5.15□□□□□ -1.59
CIITA-214ENST00000636238 SUMO4Q6EEV6 95 aa5.15□□□□□ -1.59
CIITA-214ENST00000636238 RNASEKQ6P5S7 137 aaKnown RBP5.15□□□□□ -1.59
CIITA-214ENST00000636238 Q6ZTI0 123 aa5.15□□□□□ -1.59
CIITA-214ENST00000636238 NIT1Q86X76 327 aa5.15□□□□□ -1.59
CIITA-214ENST00000636238 HIST3H2BBQ8N257 126 aa5.15□□□□□ -1.59
CIITA-214ENST00000636238 RPL39LQ96EH5 51 aaKnown RBP5.15□□□□□ -1.59
CIITA-214ENST00000636238 C16orf74Q96GX8 76 aa5.15□□□□□ -1.59
CIITA-214ENST00000636238 URB1-AS1Q96HZ7 61 aa5.15□□□□□ -1.59
CIITA-214ENST00000636238 PGPEP1Q9NXJ5 209 aa5.15□□□□□ -1.59
CIITA-214ENST00000636238 UBR4Q5T4S7 5183 aa5.14□□□□□ -1.59
CIITA-214ENST00000636238 VPS13BQ7Z7G8 4022 aa5.14□□□□□ -1.59
CIITA-214ENST00000636238 GAGE12BA1L429 117 aa5.14□□□□□ -1.59
CIITA-214ENST00000636238 IFITM10A6NMD0 228 aa5.14□□□□□ -1.59
CIITA-214ENST00000636238 RS1O15537 224 aa5.14□□□□□ -1.59
CIITA-214ENST00000636238 GAGE7O76087 117 aa5.14□□□□□ -1.59
CIITA-214ENST00000636238 TNFRSF6BO95407 300 aa5.14□□□□□ -1.59
CIITA-214ENST00000636238 IGHV3-53P01767 116 aa5.14□□□□□ -1.59
CIITA-214ENST00000636238 GAGE12FP0CL80 117 aa5.14□□□□□ -1.59
CIITA-214ENST00000636238 GAGE12GP0CL81 117 aa5.14□□□□□ -1.59
CIITA-214ENST00000636238 GAGE12IP0CL82 117 aa5.14□□□□□ -1.59
CIITA-214ENST00000636238 IFI27P40305 119 aaPredicted RBP5.14□□□□□ -1.59
CIITA-214ENST00000636238 ZNF56Q15929 161 aa5.14□□□□□ -1.59
CIITA-214ENST00000636238 CFAP126Q5VTH2 177 aa5.14□□□□□ -1.59
CIITA-214ENST00000636238 NRACQ8N912 160 aa5.14□□□□□ -1.59
CIITA-214ENST00000636238 RASL10AQ92737 203 aa5.14□□□□□ -1.59
CIITA-214ENST00000636238 PTH2Q96A98 100 aa5.14□□□□□ -1.59
CIITA-214ENST00000636238 HMCN2Q8NDA2 5059 aa5.14□□□□□ -1.59
CIITA-214ENST00000636238 A8MWV9 139 aa5.13□□□□□ -1.59
CIITA-214ENST00000636238 PPBPP02775 128 aa5.13□□□□□ -1.59
CIITA-214ENST00000636238 FABP4P15090 132 aa5.13□□□□□ -1.59
CIITA-214ENST00000636238 S100A2P29034 98 aa5.13□□□□□ -1.59
CIITA-214ENST00000636238 AKR1D1P51857 326 aa5.13□□□□□ -1.59
CIITA-214ENST00000636238 DAZ2Q13117 558 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms