RNA–Protein interactions for RNA: ENST00000635893.1

SCN1A-211, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 168 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-211ENST00000635893 APOC1P02654 83 aa-1.95□□□□□ -2.72
SCN1A-211ENST00000635893 SLC25A4P12235 298 aa-1.95□□□□□ -2.72
SCN1A-211ENST00000635893 ACYP2P14621 99 aa-1.95□□□□□ -2.72
SCN1A-211ENST00000635893 PIGYQ3MUY2 71 aa-1.95□□□□□ -2.72
SCN1A-211ENST00000635893 BORCS8Q96FH0 119 aa-1.95□□□□□ -2.72
SCN1A-211ENST00000635893 ARMC1Q9NVT9 282 aa-1.95□□□□□ -2.72
SCN1A-211ENST00000635893 PYCARDQ9ULZ3 195 aa-1.95□□□□□ -2.72
SCN1A-211ENST00000635893 GOLGA3Q08378 1498 aa-1.95□□□□□ -2.72
SCN1A-211ENST00000635893 SBF2Q86WG5 1849 aa-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 DLC1Q96QB1 1528 aa-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 PCF11O94913 1555 aaKnown RBP-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 CDC42BPGQ6DT37 1551 aa-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 G3V318 75 aa-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 CSN2P05814 226 aa-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 PPP1R2P41236 205 aa-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 POLR2JP52435 117 aaKnown RBP-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 CCL7P80098 99 aa-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 INSL4Q14641 139 aa-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 AKR1C8PQ5T2L2 129 aa-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 NUP35Q8NFH5 326 aa-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 AMELXQ99217 191 aa-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 DMDP11532 3685 aa-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 AKAP11Q9UKA4 1901 aa-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 KDM3BQ7LBC6 1761 aa-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 LRP5O75197 1615 aa-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 MGAQ8IWI9 3026 aa-1.96□□□□□ -2.72
SCN1A-211ENST00000635893 TRBV10-3A0A0K0K1G6 114 aa-1.97□□□□□ -2.72
SCN1A-211ENST00000635893 TMEM14DPA8MWL7 114 aa-1.97□□□□□ -2.72
SCN1A-211ENST00000635893 BLCAPP62952 87 aa-1.97□□□□□ -2.72
SCN1A-211ENST00000635893 PBDC1Q9BVG4 233 aa-1.97□□□□□ -2.72
SCN1A-211ENST00000635893 SS18L2Q9UHA2 77 aa-1.97□□□□□ -2.72
SCN1A-211ENST00000635893 NSD3Q9BZ95 1437 aa-1.98□□□□□ -2.73
SCN1A-211ENST00000635893 TRBV7-1A0A0A6YYK4 115 aa-1.98□□□□□ -2.73
SCN1A-211ENST00000635893 TMEM210A6NLX4 147 aa-1.98□□□□□ -2.73
SCN1A-211ENST00000635893 IFNA6P05013 189 aa-1.98□□□□□ -2.73
SCN1A-211ENST00000635893 LTC4SQ16873 150 aa-1.98□□□□□ -2.73
SCN1A-211ENST00000635893 SH3BGRL3Q9H299 93 aa-1.98□□□□□ -2.73
SCN1A-211ENST00000635893 LYRM2Q9NU23 88 aaPredicted RBP-1.98□□□□□ -2.73
SCN1A-211ENST00000635893 SLC22A13Q9Y226 551 aa-1.98□□□□□ -2.73
SCN1A-211ENST00000635893 TRAPPC8Q9Y2L5 1435 aa-1.99□□□□□ -2.73
SCN1A-211ENST00000635893 CENPEQ02224 2701 aa-1.99□□□□□ -2.73
SCN1A-211ENST00000635893 CXorf51AA0A1B0GTR3 108 aa-1.99□□□□□ -2.73
SCN1A-211ENST00000635893 NPFFO15130 113 aa-1.99□□□□□ -2.73
SCN1A-211ENST00000635893 ADCYAP1P18509 176 aa-1.99□□□□□ -2.73
SCN1A-211ENST00000635893 RPL19P84098 196 aaKnown RBP-1.99□□□□□ -2.73
SCN1A-211ENST00000635893 CROCCP2Q86T23 111 aa-1.99□□□□□ -2.73
SCN1A-211ENST00000635893 PPP1R14BQ96C90 147 aa-1.99□□□□□ -2.73
SCN1A-211ENST00000635893 BATF3Q9NR55 127 aa-1.99□□□□□ -2.73
SCN1A-211ENST00000635893 APLNQ9ULZ1 77 aa-1.99□□□□□ -2.73
SCN1A-211ENST00000635893 ERCC6L2Q5T890 1561 aa-1.99□□□□□ -2.73
SCN1A-211ENST00000635893 LRP6O75581 1613 aa-1.99□□□□□ -2.73
SCN1A-211ENST00000635893 FMN2Q9NZ56 1722 aa-2□□□□□ -2.73
SCN1A-211ENST00000635893 TCRBV3S1A0A5B6 114 aa-2□□□□□ -2.73
SCN1A-211ENST00000635893 PIN1P1O15428 100 aa-2□□□□□ -2.73
SCN1A-211ENST00000635893 ARF6P62330 175 aa-2□□□□□ -2.73
SCN1A-211ENST00000635893 C4orf33Q8N1A6 199 aa-2□□□□□ -2.73
SCN1A-211ENST00000635893 TEX29Q8N6K0 151 aa-2□□□□□ -2.73
SCN1A-211ENST00000635893 OR51A4Q8NGJ6 313 aa-2□□□□□ -2.73
SCN1A-211ENST00000635893 AP3S1Q92572 193 aa-2□□□□□ -2.73
SCN1A-211ENST00000635893 BCORQ6W2J9 1755 aa-2□□□□□ -2.73
SCN1A-211ENST00000635893 PTPRGP23470 1445 aa-2□□□□□ -2.73
SCN1A-211ENST00000635893 TCOF1Q13428 1488 aaKnown RBP-2.01□□□□□ -2.73
SCN1A-211ENST00000635893 MAP3K1Q13233 1512 aa-2.01□□□□□ -2.73
SCN1A-211ENST00000635893 TRAV16A0A0A6YYK6 109 aaPredicted RBP-2.01□□□□□ -2.73
SCN1A-211ENST00000635893 IGHV1-24A0A0C4DH33 117 aa-2.01□□□□□ -2.73
SCN1A-211ENST00000635893 ALX1Q15699 326 aa-2.01□□□□□ -2.73
SCN1A-211ENST00000635893 PTRHD1Q6GMV3 140 aaKnown RBP-2.01□□□□□ -2.73
SCN1A-211ENST00000635893 HRCT1Q6UXD1 115 aa-2.01□□□□□ -2.73
SCN1A-211ENST00000635893 MAFIPQ8WZ33 124 aa-2.01□□□□□ -2.73
SCN1A-211ENST00000635893 PHB2Q99623 299 aa-2.01□□□□□ -2.73
SCN1A-211ENST00000635893 ARFGEF1Q9Y6D6 1849 aa-2.01□□□□□ -2.73
SCN1A-211ENST00000635893 PLB1Q6P1J6 1458 aa-2.01□□□□□ -2.73
SCN1A-211ENST00000635893 MAGI1Q96QZ7 1491 aaPredicted RBP-2.01□□□□□ -2.73
SCN1A-211ENST00000635893 TRBV27A0A0K0K1C4 114 aa-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 GABARAPH6UMI1 98 aa-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 M0R2P5 195 aa-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 MFSD11O43934 449 aa-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 SSSCA1O60232 199 aa-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 IFNA21P01568 189 aa-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 CCL3L1P16619 93 aa-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 S100A3P33764 101 aa-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 ERVS71-1P61550 626 aa-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 BASP1P80723 227 aaKnown RBP-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 OR2T2Q6IF00 324 aa-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 DEFB123Q8N688 67 aa-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 OR4S1Q8NGB4 309 aa-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 OTOSQ8NHW6 89 aa-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 ARL2BPQ9Y2Y0 163 aa-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 SPEGQ15772 3267 aa-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 SMG6Q86US8 1419 aaKnown RBP-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 WDR97A6NE52 1622 aa-2.02□□□□□ -2.73
SCN1A-211ENST00000635893 ATG12O94817 140 aa-2.03□□□□□ -2.73
SCN1A-211ENST00000635893 IFNGP01579 166 aa-2.03□□□□□ -2.73
SCN1A-211ENST00000635893 CKS2P33552 79 aa-2.03□□□□□ -2.73
SCN1A-211ENST00000635893 SDC2P34741 201 aa-2.03□□□□□ -2.73
SCN1A-211ENST00000635893 CDKN2CP42773 168 aa-2.03□□□□□ -2.73
SCN1A-211ENST00000635893 CFAP126Q5VTH2 177 aa-2.03□□□□□ -2.73
SCN1A-211ENST00000635893 SLC48A1Q6P1K1 146 aa-2.03□□□□□ -2.73
SCN1A-211ENST00000635893 MORN4Q8NDC4 146 aa-2.03□□□□□ -2.73
SCN1A-211ENST00000635893 CRYBG3Q68DQ2 2970 aa-2.03□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms