RNA–Protein interactions for RNA: ENST00000628890.1

UBE3A-217, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 424 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-217ENST00000628890 MUCL1Q96DR8 90 aa1.78□□□□□ -2.12
UBE3A-217ENST00000628890 TRGV9Q99603 122 aa1.78□□□□□ -2.12
UBE3A-217ENST00000628890 FBN1P35555 2871 aaKnown RBP1.78□□□□□ -2.12
UBE3A-217ENST00000628890 PLXNA1Q9UIW2 1896 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 RGPD2P0DJD1 1756 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 COL24A1Q17RW2 1714 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 TOPAZ1Q8N9V7 1692 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 CFAP43Q8NDM7 1665 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 CFAP74Q9C0B2 1584 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 LAMC3Q9Y6N6 1575 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 ADGRB3O60242 1522 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 IQSEC2Q5JU85 1478 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 LRRC9Q6ZRR7 1453 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 TRAV2A0A0B4J234 112 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 IGHV1-24A0A0C4DH33 117 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 C2orf70A6NJV1 201 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 SMIM11AP58511 58 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 INSL4Q14641 139 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 SMIM5Q71RC9 77 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 LYPD1Q8N2G4 141 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 Q8N8P6 123 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 CCL4L1Q8NHW4 92 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 AMELYQ99218 206 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 NABP2Q9BQ15 211 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 TXNDC17Q9BRA2 123 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 KRTAP4-1Q9BYQ7 146 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 CST11Q9H112 138 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 NXT2Q9NPJ8 142 aaKnown RBP1.77□□□□□ -2.13
UBE3A-217ENST00000628890 PLXNA2O75051 1894 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 PLXNA3P51805 1871 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 TANC1Q9C0D5 1861 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 LAMB1P07942 1786 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 NWD2Q9ULI1 1742 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 KIF1AQ12756 1690 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 LAMC1P11047 1609 aa1.77□□□□□ -2.13
UBE3A-217ENST00000628890 RNF17Q9BXT8 1623 aaKnown RBP1.77□□□□□ -2.13
UBE3A-217ENST00000628890 PLXNC1O60486 1568 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 DIP2AQ14689 1571 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 ABCC1P33527 1531 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 DISP1Q96F81 1524 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 LRRC7Q96NW7 1537 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 EDC4Q6P2E9 1401 aaKnown RBP1.76□□□□□ -2.13
UBE3A-217ENST00000628890 BTAF1O14981 1849 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 TRAV14DV4A0A0A6YYC5 116 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 TRAV12-1A0A0B4J245 112 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 TRAV17A0A0B4J275 112 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 NDUFC1O43677 76 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 ACYP1P07311 99 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 PIRTP0C851 137 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 SNRPFP62306 86 aaKnown RBP1.76□□□□□ -2.13
UBE3A-217ENST00000628890 SPANXN1Q5VSR9 72 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 COMMD6Q7Z4G1 85 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 SERP2Q8N6R1 65 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 TTTY12Q9BZ98 90 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 KDM3BQ7LBC6 1761 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 ARFGEF2Q9Y6D5 1785 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 RGPD1P0DJD0 1748 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 ITSN1Q15811 1721 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 USP54Q70EL1 1684 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 PIK3C2BO00750 1634 aa1.76□□□□□ -2.13
UBE3A-217ENST00000628890 MGAMO43451 1857 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 AFDNP55196 1824 aaKnown RBP1.75□□□□□ -2.13
UBE3A-217ENST00000628890 COL4A5P29400 1685 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 CLTCQ00610 1675 aaKnown RBP1.75□□□□□ -2.13
UBE3A-217ENST00000628890 A6NIN4 97 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 A6NN06 94 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 C5orf67F2Z3F1 127 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 CCL16O15467 120 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 NUPR1O60356 82 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 CCKP06307 115 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 DSCR4P56555 118 aaPredicted RBP1.75□□□□□ -2.13
UBE3A-217ENST00000628890 RBM3P98179 157 aaKnown RBP1.75□□□□□ -2.13
UBE3A-217ENST00000628890 Q1T7F1 81 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 MPV17LQ2QL34 196 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 S100A7L2Q5SY68 101 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 BRD3OSQ6XYD6 125 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 CLECL1Q8IZS7 167 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 Q96M85 177 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 SMIM7Q9BQ49 75 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 RAPGEF6Q8TEU7 1601 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 TRPM7Q96QT4 1865 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 NKTRP30414 1462 aaKnown RBP1.75□□□□□ -2.13
UBE3A-217ENST00000628890 CDK12Q9NYV4 1490 aaPredicted RBP1.75□□□□□ -2.13
UBE3A-217ENST00000628890 SIPA1L3O60292 1781 aaPredicted RBP1.75□□□□□ -2.13
UBE3A-217ENST00000628890 DOCK11Q5JSL3 2073 aa1.75□□□□□ -2.13
UBE3A-217ENST00000628890 TET3O43151 1660 aa1.74□□□□□ -2.13
UBE3A-217ENST00000628890 KIAA1549Q9HCM3 1950 aa1.74□□□□□ -2.13
UBE3A-217ENST00000628890 DIP2CQ9Y2E4 1556 aa1.74□□□□□ -2.13
UBE3A-217ENST00000628890 TRAV10A0A0B4J240 114 aa1.74□□□□□ -2.13
UBE3A-217ENST00000628890 LOC107984156A0A0G2JMH3 177 aa1.74□□□□□ -2.13
UBE3A-217ENST00000628890 TCRBV4S1A1TA0A5B7 111 aa1.74□□□□□ -2.13
UBE3A-217ENST00000628890 CRYM-AS1A6NIL9 109 aa1.74□□□□□ -2.13
UBE3A-217ENST00000628890 E7EUB6 86 aa1.74□□□□□ -2.13
UBE3A-217ENST00000628890 IGKV4-1P06312 121 aa1.74□□□□□ -2.13
UBE3A-217ENST00000628890 UBE2G1P62253 170 aa1.74□□□□□ -2.13
UBE3A-217ENST00000628890 RHOHQ15669 191 aa1.74□□□□□ -2.13
UBE3A-217ENST00000628890 RPL7L1Q6DKI1 246 aaKnown RBP1.74□□□□□ -2.13
UBE3A-217ENST00000628890 XAF1Q6GPH4 301 aa1.74□□□□□ -2.13
UBE3A-217ENST00000628890 ARL17AQ8IVW1 177 aa1.74□□□□□ -2.13
UBE3A-217ENST00000628890 DYNLRB2Q8TF09 96 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms