RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 NRXN3Q9Y4C0 1643 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 IGHV3-21A0A0B4J1V1 117 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 C2orf70A6NJV1 201 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 KRTAP4-16G5E9R7 235 aaPredicted RBP1.88□□□□□ -2.11
CNOT1-223ENST00000628857 CPSF4O95639 269 aaKnown RBP1.88□□□□□ -2.11
CNOT1-223ENST00000628857 IGHV1-69P01742 117 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 XCL1P47992 114 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 CMC4P56277 68 aaPredicted RBP1.88□□□□□ -2.11
CNOT1-223ENST00000628857 SUPT4H1P63272 117 aaKnown RBP1.88□□□□□ -2.11
CNOT1-223ENST00000628857 ZNF117Q03924 483 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 SYCNQ0VAF6 134 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 KLKP1Q107X0 134 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 MIAQ16674 131 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 DEFB121Q5J5C9 76 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 VMO1Q7Z5L0 202 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 SPTSSBQ8NFR3 76 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 NPBQ8NG41 125 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 C8orf17Q9NRJ1 99 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 KLK12Q9UKR0 248 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 MYO7AQ13402 2215 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 LTBP2Q14767 1821 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 BRWD3Q6RI45 1802 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 ADGRB2O60241 1585 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 LY75O60449 1722 aa1.88□□□□□ -2.11
CNOT1-223ENST00000628857 DDX60LQ5H9U9 1706 aaKnown RBP1.88□□□□□ -2.11
CNOT1-223ENST00000628857 PAPPA2Q9BXP8 1791 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 PTPRSQ13332 1948 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 MYOFQ9NZM1 2061 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 SCN7AQ01118 1682 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 EML5Q05BV3 1969 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 IGLV1-50A0A075B6I6 118 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 TMSB15BA0A087X1C1 80 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 IGHV3-49A0A0A0MS15 119 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 IGHV7-4-1A0A0J9YVY3 117 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 TRBV10-3A0A0K0K1G6 114 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 MYMXA0A1B0GTQ4 84 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 A6NED7 52 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 GNRH2O43555 120 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 IGLV2-23P01705 113 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 MSMBP08118 114 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 CGB3P0DN86 165 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 CGB7P0DN87 165 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 IGHV3-30-3P0DP02 117 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 CCL5P13501 91 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 FXYD2P54710 66 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 UBE2D3P61077 147 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 UBE2D2P62837 147 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 SSBP1Q04837 148 aaKnown RBP1.87□□□□□ -2.11
CNOT1-223ENST00000628857 ERCC6L2Q5T890 1561 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 NCBP2-AS2Q69YL0 99 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 LYPD5Q6UWN5 251 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 CAMK2N1Q7Z7J9 78 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 SAMD9LQ8IVG5 1584 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 FAM223AQ8IWN6 122 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 IFI27L1Q96BM0 104 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 CYP4F30PQ9H0H9 118 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 PCNX2A6NKB5 2137 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 SHROOM3Q8TF72 1996 aa1.87□□□□□ -2.11
CNOT1-223ENST00000628857 COL11A1P12107 1806 aaPredicted RBP1.87□□□□□ -2.11
CNOT1-223ENST00000628857 ADAMTS7Q9UKP4 1686 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 SLIT2O94813 1529 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 TIAM2Q8IVF5 1701 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 PARP4Q9UKK3 1724 aaKnown RBP1.86□□□□□ -2.11
CNOT1-223ENST00000628857 MUC22E2RYF6 1773 aaPredicted RBP1.86□□□□□ -2.11
CNOT1-223ENST00000628857 DLEC1Q9Y238 1755 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 IGLV3-16A0A075B6K0 115 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 IGLV3-12A0A075B6K2 115 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 IGKV2D-26A0A0A0MRZ7 120 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 TRBV7-1A0A0A6YYK4 115 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 A0A0B4J2C4 111 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 C19orf71A6NCJ1 209 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 C17orf51A8MQB3 221 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 CEBPZOSA8MTT3 80 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 IQCF6A8MYZ5 107 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 C5orf67F2Z3F1 127 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 LY6HO94772 140 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 WISP3O95389 354 aaPredicted RBP1.86□□□□□ -2.11
CNOT1-223ENST00000628857 IGLV3-25P01717 112 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 HMGN2P05204 90 aaKnown RBP1.86□□□□□ -2.11
CNOT1-223ENST00000628857 PRB4P10163 310 aaPredicted RBP1.86□□□□□ -2.11
CNOT1-223ENST00000628857 RPL28P46779 137 aaKnown RBP1.86□□□□□ -2.11
CNOT1-223ENST00000628857 PLGLAQ15195 96 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 RNASE13Q5GAN3 156 aaKnown RBP1.86□□□□□ -2.11
CNOT1-223ENST00000628857 CASC2Q6XLA1 102 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 SDIM1Q6ZPB5 146 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 C20orf197Q8N268 126 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 FAM19A2Q8N3H0 131 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 Q8N6K4 173 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 Q8N814 137 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 SMCR5Q8TEV8 140 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 CHCHD7Q9BUK0 85 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 CMC2Q9NRP2 79 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 ABRACLQ9P1F3 81 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 PRO1854Q9UHT4 67 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 SVILO95425 2214 aa1.86□□□□□ -2.11
CNOT1-223ENST00000628857 MUC4Q99102 2169 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 ZNF407Q9C0G0 2248 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 TRBV7-3A0A075B6L6 115 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 TRAV7A0A075B6U4 112 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 IGHV3-66A0A0C4DH42 116 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms