RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 PGLYRP4Q96LB8 373 aa13.55□□□□□ -0.24
PNKP-219ENST00000626274 SUMO4Q6EEV6 95 aa13.54□□□□□ -0.24
PNKP-219ENST00000626274 NFE4Q86UQ8 179 aa13.54□□□□□ -0.24
PNKP-219ENST00000626274 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.54□□□□□ -0.24
PNKP-219ENST00000626274 GFRA4Q9GZZ7 299 aa13.54□□□□□ -0.24
PNKP-219ENST00000626274 BIRC6Q9NR09 4857 aa13.53□□□□□ -0.24
PNKP-219ENST00000626274 FAM231BA6NCW3 169 aa13.53□□□□□ -0.24
PNKP-219ENST00000626274 M0QY20 66 aa13.53□□□□□ -0.24
PNKP-219ENST00000626274 CLLU1Q5K131 121 aa13.53□□□□□ -0.24
PNKP-219ENST00000626274 SMIM15Q7Z3B0 74 aa13.53□□□□□ -0.24
PNKP-219ENST00000626274 BORCS7Q96B45 105 aa13.53□□□□□ -0.24
PNKP-219ENST00000626274 DNAJC30Q96LL9 226 aa13.53□□□□□ -0.24
PNKP-219ENST00000626274 TNFRSF18Q9Y5U5 241 aa13.53□□□□□ -0.24
PNKP-219ENST00000626274 V9GYV3 84 aa13.53□□□□□ -0.24
PNKP-219ENST00000626274 FAT2Q9NYQ8 4349 aa13.52□□□□□ -0.24
PNKP-219ENST00000626274 IGHV3-30P01768 117 aa13.52□□□□□ -0.25
PNKP-219ENST00000626274 IGHV3-33P01772 117 aa13.52□□□□□ -0.25
PNKP-219ENST00000626274 IGHV3-30-3P0DP02 117 aa13.52□□□□□ -0.25
PNKP-219ENST00000626274 IGHV3-30-5P0DP03 117 aa13.52□□□□□ -0.25
PNKP-219ENST00000626274 Q6ZRN7 208 aaPredicted RBP13.52□□□□□ -0.25
PNKP-219ENST00000626274 HIGD1CA8MV81 97 aa13.51□□□□□ -0.25
PNKP-219ENST00000626274 RASL11AQ6T310 242 aa13.51□□□□□ -0.25
PNKP-219ENST00000626274 IBA57-AS1B1ANH7 110 aa13.5□□□□□ -0.25
PNKP-219ENST00000626274 IFITM2Q01629 132 aa13.5□□□□□ -0.25
PNKP-219ENST00000626274 DAZ4Q86SG3 579 aaKnown RBP13.5□□□□□ -0.25
PNKP-219ENST00000626274 DAZ3Q9NR90 486 aaKnown RBP13.5□□□□□ -0.25
PNKP-219ENST00000626274 A0A1B0GUT8 65 aa13.49□□□□□ -0.25
PNKP-219ENST00000626274 TMEM97Q5BJF2 176 aa13.49□□□□□ -0.25
PNKP-219ENST00000626274 TRBV6-8A0A0A6YYG3 113 aa13.48□□□□□ -0.25
PNKP-219ENST00000626274 NIT1Q86X76 327 aa13.48□□□□□ -0.25
PNKP-219ENST00000626274 NIT2Q9NQR4 276 aa13.48□□□□□ -0.25
PNKP-219ENST00000626274 URGCP-MRPS24S4R325 110 aa13.48□□□□□ -0.25
PNKP-219ENST00000626274 Q8N3U1 123 aa13.47□□□□□ -0.25
PNKP-219ENST00000626274 NUP35Q8NFH5 326 aa13.46□□□□□ -0.25
PNKP-219ENST00000626274 NAT8BQ9UHF3 227 aa13.46□□□□□ -0.25
PNKP-219ENST00000626274 RIGQ13278 110 aa13.45□□□□□ -0.26
PNKP-219ENST00000626274 LAGE3Q14657 143 aa13.45□□□□□ -0.26
PNKP-219ENST00000626274 GATD1Q8NB37 220 aa13.45□□□□□ -0.26
PNKP-219ENST00000626274 FRZBQ92765 325 aa13.45□□□□□ -0.26
PNKP-219ENST00000626274 CHCHD7Q9BUK0 85 aa13.45□□□□□ -0.26
PNKP-219ENST00000626274 A0A087WX48 190 aa13.44□□□□□ -0.26
PNKP-219ENST00000626274 SMIM27A0A1W2PRY6 76 aa13.44□□□□□ -0.26
PNKP-219ENST00000626274 KCNIP4Q6PIL6 250 aa13.44□□□□□ -0.26
PNKP-219ENST00000626274 NTM-AS1Q6ZSK4 140 aa13.44□□□□□ -0.26
PNKP-219ENST00000626274 Q9HAA7 133 aa13.44□□□□□ -0.26
PNKP-219ENST00000626274 TRAV26-2A0A0B4J265 109 aa13.43□□□□□ -0.26
PNKP-219ENST00000626274 TMEM191AQ9H0A3 160 aa13.43□□□□□ -0.26
PNKP-219ENST00000626274 HECTD4Q9Y4D8 3996 aa13.43□□□□□ -0.26
PNKP-219ENST00000626274 TRBV25-1A0A075B6N4 114 aa13.42□□□□□ -0.26
PNKP-219ENST00000626274 TMEM262E9PQX1 116 aa13.42□□□□□ -0.26
PNKP-219ENST00000626274 PNRC1Q12796 327 aaPredicted RBP13.42□□□□□ -0.26
PNKP-219ENST00000626274 CHCHD5Q9BSY4 110 aa13.42□□□□□ -0.26
PNKP-219ENST00000626274 TRAV8-3A0A0A6YYJ7 113 aa13.41□□□□□ -0.26
PNKP-219ENST00000626274 PKIAP61925 76 aa13.41□□□□□ -0.26
PNKP-219ENST00000626274 ELOBQ15370 118 aa13.41□□□□□ -0.26
PNKP-219ENST00000626274 IGHV1-24A0A0C4DH33 117 aa13.4□□□□□ -0.26
PNKP-219ENST00000626274 EREGO14944 169 aa13.4□□□□□ -0.26
PNKP-219ENST00000626274 PSCAO43653 123 aa13.4□□□□□ -0.26
PNKP-219ENST00000626274 IQCJQ1A5X6 159 aa13.4□□□□□ -0.26
PNKP-219ENST00000626274 UQCC3Q6UW78 93 aa13.4□□□□□ -0.26
PNKP-219ENST00000626274 KLK12Q9UKR0 248 aa13.4□□□□□ -0.26
PNKP-219ENST00000626274 PKD1P98161 4303 aa13.39□□□□□ -0.27
PNKP-219ENST00000626274 PPP1R2P9O14990 202 aa13.39□□□□□ -0.27
PNKP-219ENST00000626274 SPATA12Q7Z6I5 190 aa13.39□□□□□ -0.27
PNKP-219ENST00000626274 RPL39LQ96EH5 51 aaKnown RBP13.39□□□□□ -0.27
PNKP-219ENST00000626274 A0A087WTM6 91 aa13.38□□□□□ -0.27
PNKP-219ENST00000626274 RAB4AP20338 218 aa13.38□□□□□ -0.27
PNKP-219ENST00000626274 AMN1Q8IY45 258 aa13.38□□□□□ -0.27
PNKP-219ENST00000626274 RNF185Q96GF1 192 aa13.38□□□□□ -0.27
PNKP-219ENST00000626274 TM2D2Q9BX73 214 aa13.38□□□□□ -0.27
PNKP-219ENST00000626274 A0A1B0GW15 77 aa13.37□□□□□ -0.27
PNKP-219ENST00000626274 COTL1Q14019 142 aa13.37□□□□□ -0.27
PNKP-219ENST00000626274 MPV17L2Q567V2 206 aa13.37□□□□□ -0.27
PNKP-219ENST00000626274 C16orf90A8MZG2 172 aa13.36□□□□□ -0.27
PNKP-219ENST00000626274 GAGE6Q13070 117 aa13.36□□□□□ -0.27
PNKP-219ENST00000626274 ATRAIDQ6UW56 229 aa13.36□□□□□ -0.27
PNKP-219ENST00000626274 UBE2WQ96B02 151 aa13.36□□□□□ -0.27
PNKP-219ENST00000626274 MRAP2Q96G30 205 aa13.36□□□□□ -0.27
PNKP-219ENST00000626274 TMEM243Q9BU79 118 aa13.36□□□□□ -0.27
PNKP-219ENST00000626274 TRBV6-5A0A0K0K1A5 114 aa13.35□□□□□ -0.27
PNKP-219ENST00000626274 MT-ND4LP03901 98 aa13.35□□□□□ -0.27
PNKP-219ENST00000626274 CAMPP49913 170 aa13.35□□□□□ -0.27
PNKP-219ENST00000626274 RMI2Q96E14 147 aa13.35□□□□□ -0.27
PNKP-219ENST00000626274 SDHAF1A6NFY7 115 aa13.34□□□□□ -0.27
PNKP-219ENST00000626274 GAS8-AS1O95177 125 aa13.34□□□□□ -0.27
PNKP-219ENST00000626274 ANGP03950 147 aaKnown RBP13.34□□□□□ -0.27
PNKP-219ENST00000626274 S100A8P05109 93 aa13.34□□□□□ -0.27
PNKP-219ENST00000626274 AMTP48728 403 aa13.34□□□□□ -0.27
PNKP-219ENST00000626274 KRTAP10-2P60368 255 aa13.34□□□□□ -0.27
PNKP-219ENST00000626274 Q8N976 141 aa13.34□□□□□ -0.27
PNKP-219ENST00000626274 DEFB104AQ8WTQ1 72 aa13.34□□□□□ -0.27
PNKP-219ENST00000626274 ANAPC16Q96DE5 110 aa13.34□□□□□ -0.27
PNKP-219ENST00000626274 COX11Q9Y6N1 276 aa13.34□□□□□ -0.27
PNKP-219ENST00000626274 PKHD1P08F94 4074 aa13.34□□□□□ -0.27
PNKP-219ENST00000626274 DNAH11Q96DT5 4516 aa13.33□□□□□ -0.28
PNKP-219ENST00000626274 TMEM218A2RU14 115 aa13.33□□□□□ -0.28
PNKP-219ENST00000626274 NCR2O95944 276 aa13.33□□□□□ -0.28
PNKP-219ENST00000626274 RBX1P62877 108 aa13.33□□□□□ -0.28
PNKP-219ENST00000626274 Q0VG73 95 aa13.33□□□□□ -0.28
PNKP-219ENST00000626274 MRPL54Q6P161 138 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms