RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 UBE2D1P51668 147 aa13.16□□□□□ -0.3
PCF11-207ENST00000624931 ANXA2RQ3ZCQ2 193 aa13.16□□□□□ -0.3
PCF11-207ENST00000624931 MORN3Q6PF18 240 aaPredicted RBP13.16□□□□□ -0.3
PCF11-207ENST00000624931 GTSF1LQ9H1H1 148 aa13.16□□□□□ -0.3
PCF11-207ENST00000624931 CRLF1O75462 422 aa13.15□□□□□ -0.3
PCF11-207ENST00000624931 SRSF9Q13242 221 aaKnown RBP eCLIP13.15□□□□□ -0.34e-6■■□□□ 11.4
PCF11-207ENST00000624931 SCGB1D4Q6XE38 83 aa13.15□□□□□ -0.3
PCF11-207ENST00000624931 C14orf178Q8N769 122 aaPredicted RBP13.15□□□□□ -0.3
PCF11-207ENST00000624931 RNF152Q8N8N0 203 aa13.15□□□□□ -0.3
PCF11-207ENST00000624931 C11orf44Q8N8P7 122 aa13.15□□□□□ -0.3
PCF11-207ENST00000624931 LINC01006Q8NI28 216 aa13.15□□□□□ -0.3
PCF11-207ENST00000624931 MRPL16Q9NX20 251 aaKnown RBP13.15□□□□□ -0.3
PCF11-207ENST00000624931 MGPP08493 103 aa13.14□□□□□ -0.31
PCF11-207ENST00000624931 PGPEP1Q9NXJ5 209 aa13.14□□□□□ -0.31
PCF11-207ENST00000624931 TRBV20-1A0A075B6N2 111 aa13.13□□□□□ -0.31
PCF11-207ENST00000624931 VCYO14598 125 aa13.13□□□□□ -0.31
PCF11-207ENST00000624931 DEFB136Q30KP8 78 aa13.13□□□□□ -0.31
PCF11-207ENST00000624931 KHDC1LQ5JSQ8 128 aa13.13□□□□□ -0.31
PCF11-207ENST00000624931 GPHB5Q86YW7 130 aa13.13□□□□□ -0.31
PCF11-207ENST00000624931 RPL39LQ96EH5 51 aaKnown RBP13.13□□□□□ -0.31
PCF11-207ENST00000624931 TIMM17AQ99595 171 aa13.13□□□□□ -0.31
PCF11-207ENST00000624931 C1QTNF4Q9BXJ3 329 aa13.13□□□□□ -0.31
PCF11-207ENST00000624931 APOMO95445 188 aa13.13□□□□□ -0.31
PCF11-207ENST00000624931 EDN2P20800 178 aa13.13□□□□□ -0.31
PCF11-207ENST00000624931 PMVKQ15126 192 aa13.13□□□□□ -0.31
PCF11-207ENST00000624931 SH2D6Q7Z4S9 175 aa13.13□□□□□ -0.31
PCF11-207ENST00000624931 SMAGPQ0VAQ4 97 aa13.12□□□□□ -0.31
PCF11-207ENST00000624931 CFAP126Q5VTH2 177 aa13.12□□□□□ -0.31
PCF11-207ENST00000624931 AMTNQ6UX39 209 aa13.12□□□□□ -0.31
PCF11-207ENST00000624931 MTURNQ8N3F0 131 aa13.12□□□□□ -0.31
PCF11-207ENST00000624931 UBE2E2Q96LR5 201 aa13.12□□□□□ -0.31
PCF11-207ENST00000624931 C16orf95Q9H693 158 aa13.12□□□□□ -0.31
PCF11-207ENST00000624931 CD28P10747 220 aa13.11□□□□□ -0.31
PCF11-207ENST00000624931 RNASE4P34096 147 aaKnown RBP13.11□□□□□ -0.31
PCF11-207ENST00000624931 Q6ZQT7 251 aa13.11□□□□□ -0.31
PCF11-207ENST00000624931 DUX3Q96PT4 197 aa13.11□□□□□ -0.31
PCF11-207ENST00000624931 KIR2DL4Q99706 377 aa13.11□□□□□ -0.31
PCF11-207ENST00000624931 C11orf86A6NJI1 115 aa13.1□□□□□ -0.31
PCF11-207ENST00000624931 RNASE3P12724 160 aaKnown RBP13.1□□□□□ -0.31
PCF11-207ENST00000624931 UBE2D3P61077 147 aa13.1□□□□□ -0.31
PCF11-207ENST00000624931 UBE2D2P62837 147 aa13.1□□□□□ -0.31
PCF11-207ENST00000624931 FOXI1Q12951 378 aa13.1□□□□□ -0.31
PCF11-207ENST00000624931 KIF25-AS1Q9Y6Z4 181 aa13.1□□□□□ -0.31
PCF11-207ENST00000624931 IGIPA6NJ69 53 aa13.1□□□□□ -0.31
PCF11-207ENST00000624931 POLR2KP53803 58 aaKnown RBP13.1□□□□□ -0.31
PCF11-207ENST00000624931 TRBV6-5A0A0K0K1A5 114 aa13.09□□□□□ -0.31
PCF11-207ENST00000624931 A0A1W2PRX2 142 aa13.09□□□□□ -0.31
PCF11-207ENST00000624931 ID1P41134 155 aa13.09□□□□□ -0.31
PCF11-207ENST00000624931 SETD2Q9BYW2 2564 aaPredicted RBP13.08□□□□□ -0.31
PCF11-207ENST00000624931 NDUFA7O95182 113 aa13.08□□□□□ -0.32
PCF11-207ENST00000624931 CRYGDP07320 174 aa13.08□□□□□ -0.32
PCF11-207ENST00000624931 CD7P09564 240 aa13.08□□□□□ -0.32
PCF11-207ENST00000624931 ZFP2Q6ZN57 461 aa13.08□□□□□ -0.32
PCF11-207ENST00000624931 KLHL30-AS1Q8NEE0 82 aa13.08□□□□□ -0.32
PCF11-207ENST00000624931 IGLV4-69A0A075B6H9 119 aa13.08□□□□□ -0.32
PCF11-207ENST00000624931 A0A0J9YY99 117 aa13.08□□□□□ -0.32
PCF11-207ENST00000624931 KLLNB2CW77 178 aa13.08□□□□□ -0.32
PCF11-207ENST00000624931 TSPAN13O95857 204 aa13.08□□□□□ -0.32
PCF11-207ENST00000624931 LINC00315P59091 139 aa13.08□□□□□ -0.32
PCF11-207ENST00000624931 FAM159AQ6UWV7 190 aa13.08□□□□□ -0.32
PCF11-207ENST00000624931 J3KRW8 73 aa13.07□□□□□ -0.32
PCF11-207ENST00000624931 M0QXV9 152 aa13.07□□□□□ -0.32
PCF11-207ENST00000624931 GNRH2O43555 120 aa13.07□□□□□ -0.32
PCF11-207ENST00000624931 HOXD3P31249 432 aaPredicted RBP13.07□□□□□ -0.32
PCF11-207ENST00000624931 SLURP1P55000 103 aa13.07□□□□□ -0.32
PCF11-207ENST00000624931 NDUFA11Q86Y39 141 aa13.07□□□□□ -0.32
PCF11-207ENST00000624931 SLC25A29Q8N8R3 303 aa13.07□□□□□ -0.32
PCF11-207ENST00000624931 C4orf3Q8WVX3 66 aa13.07□□□□□ -0.32
PCF11-207ENST00000624931 PPDPFLQ8WWR9 84 aa13.07□□□□□ -0.32
PCF11-207ENST00000624931 ODF3Q96PU9 254 aa13.07□□□□□ -0.32
PCF11-207ENST00000624931 TP53TG1Q9Y2A0 90 aa13.07□□□□□ -0.32
PCF11-207ENST00000624931 K7EMT4 169 aa13.06□□□□□ -0.32
PCF11-207ENST00000624931 DUSP14O95147 198 aaKnown RBP13.06□□□□□ -0.32
PCF11-207ENST00000624931 PSMB2P49721 201 aa13.06□□□□□ -0.32
PCF11-207ENST00000624931 SYNJ2BPP57105 145 aa13.06□□□□□ -0.32
PCF11-207ENST00000624931 SBSPONQ8IVN8 264 aa13.06□□□□□ -0.32
PCF11-207ENST00000624931 CITED2Q99967 270 aaPredicted RBP13.06□□□□□ -0.32
PCF11-207ENST00000624931 LGALS9O00182 355 aa13.05□□□□□ -0.32
PCF11-207ENST00000624931 RHOHQ15669 191 aa13.05□□□□□ -0.32
PCF11-207ENST00000624931 PLEKHB2Q96CS7 222 aa13.05□□□□□ -0.32
PCF11-207ENST00000624931 AGRNO00468 2067 aa13.05□□□□□ -0.32
PCF11-207ENST00000624931 C2CD3Q4AC94 2353 aa13.05□□□□□ -0.32
PCF11-207ENST00000624931 LOC107984156A0A0G2JMH3 177 aa13.05□□□□□ -0.32
PCF11-207ENST00000624931 TRBV27A0A0K0K1C4 114 aa13.05□□□□□ -0.32
PCF11-207ENST00000624931 PROK1P58294 105 aa13.05□□□□□ -0.32
PCF11-207ENST00000624931 KRTAP10-3P60369 221 aa13.05□□□□□ -0.32
PCF11-207ENST00000624931 ZNF876PQ49A33 203 aa13.05□□□□□ -0.32
PCF11-207ENST00000624931 ARL17AQ8IVW1 177 aa13.05□□□□□ -0.32
PCF11-207ENST00000624931 TSHBP01222 138 aa13.04□□□□□ -0.32
PCF11-207ENST00000624931 RPL11P62913 178 aaKnown RBP13.04□□□□□ -0.32
PCF11-207ENST00000624931 TEN1Q86WV5 123 aa13.04□□□□□ -0.32
PCF11-207ENST00000624931 SYT8Q8NBV8 401 aa13.04□□□□□ -0.32
PCF11-207ENST00000624931 RHPN1-AS1Q9BWJ2 59 aa13.04□□□□□ -0.32
PCF11-207ENST00000624931 DAZ1Q9NQZ3 744 aaKnown RBP13.04□□□□□ -0.32
PCF11-207ENST00000624931 IGHV3-30P01768 117 aa13.03□□□□□ -0.32
PCF11-207ENST00000624931 IGHV3-30-5P0DP03 117 aa13.03□□□□□ -0.32
PCF11-207ENST00000624931 SUMO4Q6EEV6 95 aa13.03□□□□□ -0.32
PCF11-207ENST00000624931 NFE4Q86UQ8 179 aa13.03□□□□□ -0.32
PCF11-207ENST00000624931 C10orf126Q8N4M7 172 aa13.03□□□□□ -0.32
PCF11-207ENST00000624931 TEP1Q99973 2627 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms