RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 ATP6V0E2Q8NHE4 81 aa6.58□□□□□ -1.36
LINC01560-202ENST00000624822 GTSF1Q8WW33 167 aa6.58□□□□□ -1.36
LINC01560-202ENST00000624822 PGLYRP4Q96LB8 373 aa6.58□□□□□ -1.36
LINC01560-202ENST00000624822 UPK3BQ9BT76 320 aa6.58□□□□□ -1.36
LINC01560-202ENST00000624822 EVI2AP22794 236 aa6.57□□□□□ -1.36
LINC01560-202ENST00000624822 RPL36AP83881 106 aaKnown RBP6.57□□□□□ -1.36
LINC01560-202ENST00000624822 OR10J3Q5JRS4 329 aa6.57□□□□□ -1.36
LINC01560-202ENST00000624822 SMIM15Q7Z3B0 74 aa6.57□□□□□ -1.36
LINC01560-202ENST00000624822 TSKUQ8WUA8 353 aa6.57□□□□□ -1.36
LINC01560-202ENST00000624822 RPL36ALQ969Q0 106 aaKnown RBP6.57□□□□□ -1.36
LINC01560-202ENST00000624822 DPH3P1Q9H4G8 78 aa6.57□□□□□ -1.36
LINC01560-202ENST00000624822 V9GYV3 84 aa6.57□□□□□ -1.36
LINC01560-202ENST00000624822 VPS13DQ5THJ4 4388 aa6.57□□□□□ -1.36
LINC01560-202ENST00000624822 NBDYA0A0U1RRE5 68 aa6.56□□□□□ -1.36
LINC01560-202ENST00000624822 HIGD1CA8MV81 97 aa6.56□□□□□ -1.36
LINC01560-202ENST00000624822 TTC32Q5I0X7 151 aa6.56□□□□□ -1.36
LINC01560-202ENST00000624822 WDR73Q6P4I2 378 aa6.56□□□□□ -1.36
LINC01560-202ENST00000624822 WFDC10BQ8IUB3 73 aa6.56□□□□□ -1.36
LINC01560-202ENST00000624822 GFRA4Q9GZZ7 299 aa6.56□□□□□ -1.36
LINC01560-202ENST00000624822 GTSF1LQ9H1H1 148 aa6.56□□□□□ -1.36
LINC01560-202ENST00000624822 Q9UF83 564 aa6.56□□□□□ -1.36
LINC01560-202ENST00000624822 KMT2AQ03164 3969 aa6.56□□□□□ -1.36
LINC01560-202ENST00000624822 TRBV7-3A0A075B6L6 115 aa6.55□□□□□ -1.36
LINC01560-202ENST00000624822 TRAV8-6A0A0B4J262 113 aa6.55□□□□□ -1.36
LINC01560-202ENST00000624822 TRBV10-1A0A0K0K1A3 114 aa6.55□□□□□ -1.36
LINC01560-202ENST00000624822 H7C1H1 209 aa6.55□□□□□ -1.36
LINC01560-202ENST00000624822 UQCC3Q6UW78 93 aa6.55□□□□□ -1.36
LINC01560-202ENST00000624822 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.55□□□□□ -1.36
LINC01560-202ENST00000624822 ANAPC16Q96DE5 110 aa6.55□□□□□ -1.36
LINC01560-202ENST00000624822 CNFNQ9BYD5 112 aa6.55□□□□□ -1.36
LINC01560-202ENST00000624822 KRTAP4-5Q9BYR2 181 aa6.55□□□□□ -1.36
LINC01560-202ENST00000624822 NAT8BQ9UHF3 227 aa6.55□□□□□ -1.36
LINC01560-202ENST00000624822 KIF25-AS1Q9Y6Z4 181 aa6.55□□□□□ -1.36
LINC01560-202ENST00000624822 A0A1B0GUT8 65 aa6.54□□□□□ -1.36
LINC01560-202ENST00000624822 FAM231BA6NCW3 169 aa6.54□□□□□ -1.36
LINC01560-202ENST00000624822 F8W036 122 aa6.54□□□□□ -1.36
LINC01560-202ENST00000624822 LINC00694P0DN24 101 aa6.54□□□□□ -1.36
LINC01560-202ENST00000624822 FOXA3P55318 350 aaPredicted RBP6.54□□□□□ -1.36
LINC01560-202ENST00000624822 PNRC1Q12796 327 aaPredicted RBP6.54□□□□□ -1.36
LINC01560-202ENST00000624822 LELP1Q5T871 98 aa6.54□□□□□ -1.36
LINC01560-202ENST00000624822 LCE5AQ5TCM9 118 aa6.54□□□□□ -1.36
LINC01560-202ENST00000624822 C1orf134Q5TEV5 83 aa6.54□□□□□ -1.36
LINC01560-202ENST00000624822 SUMO4Q6EEV6 95 aa6.54□□□□□ -1.36
LINC01560-202ENST00000624822 Q6ZR54 194 aa6.54□□□□□ -1.36
LINC01560-202ENST00000624822 NEXN-AS1Q8NBZ9 246 aa6.54□□□□□ -1.36
LINC01560-202ENST00000624822 TRAV9-2A0A087WT02 112 aa6.53□□□□□ -1.36
LINC01560-202ENST00000624822 IGHV3-38A0A0C4DH36 116 aa6.53□□□□□ -1.36
LINC01560-202ENST00000624822 TIRAPP58753 221 aa6.53□□□□□ -1.36
LINC01560-202ENST00000624822 LINC00315P59091 139 aa6.53□□□□□ -1.36
LINC01560-202ENST00000624822 UBE2D3P61077 147 aa6.53□□□□□ -1.36
LINC01560-202ENST00000624822 UBE2D2P62837 147 aa6.53□□□□□ -1.36
LINC01560-202ENST00000624822 RIGQ13278 110 aa6.53□□□□□ -1.36
LINC01560-202ENST00000624822 NUP35Q8NFH5 326 aa6.53□□□□□ -1.36
LINC01560-202ENST00000624822 TNFRSF18Q9Y5U5 241 aa6.53□□□□□ -1.36
LINC01560-202ENST00000624822 A0A087WWC5 75 aa6.52□□□□□ -1.37
LINC01560-202ENST00000624822 TRAV26-2A0A0B4J265 109 aa6.52□□□□□ -1.37
LINC01560-202ENST00000624822 PPP1R2P9O14990 202 aa6.52□□□□□ -1.37
LINC01560-202ENST00000624822 IGHV3-30P01768 117 aa6.52□□□□□ -1.37
LINC01560-202ENST00000624822 IGHV3-33P01772 117 aa6.52□□□□□ -1.37
LINC01560-202ENST00000624822 IGHV3-30-3P0DP02 117 aa6.52□□□□□ -1.37
LINC01560-202ENST00000624822 IGHV3-30-5P0DP03 117 aa6.52□□□□□ -1.37
LINC01560-202ENST00000624822 RASL11AQ6T310 242 aa6.52□□□□□ -1.37
LINC01560-202ENST00000624822 C6orf223Q8N319 242 aa6.52□□□□□ -1.37
LINC01560-202ENST00000624822 KRTAP1-5Q9BYS1 174 aa6.52□□□□□ -1.37
LINC01560-202ENST00000624822 DNAH6Q9C0G6 4158 aa6.52□□□□□ -1.37
LINC01560-202ENST00000624822 SMIM27A0A1W2PRY6 76 aa6.51□□□□□ -1.37
LINC01560-202ENST00000624822 TMEM218A2RU14 115 aa6.51□□□□□ -1.37
LINC01560-202ENST00000624822 M0QY20 66 aa6.51□□□□□ -1.37
LINC01560-202ENST00000624822 APOC3P02656 99 aa6.51□□□□□ -1.37
LINC01560-202ENST00000624822 MT-ND4LP03901 98 aa6.51□□□□□ -1.37
LINC01560-202ENST00000624822 DNAJC30Q96LL9 226 aa6.51□□□□□ -1.37
LINC01560-202ENST00000624822 NIT2Q9NQR4 276 aa6.51□□□□□ -1.37
LINC01560-202ENST00000624822 URGCP-MRPS24S4R325 110 aa6.51□□□□□ -1.37
LINC01560-202ENST00000624822 PRSS29PA6NIE9 313 aa6.5□□□□□ -1.37
LINC01560-202ENST00000624822 RTL8CO15255 209 aa6.5□□□□□ -1.37
LINC01560-202ENST00000624822 SCO1O75880 301 aa6.5□□□□□ -1.37
LINC01560-202ENST00000624822 DNAH10OSP0CZ25 163 aa6.5□□□□□ -1.37
LINC01560-202ENST00000624822 ADCYAP1P18509 176 aa6.5□□□□□ -1.37
LINC01560-202ENST00000624822 CAMPP49913 170 aa6.5□□□□□ -1.37
LINC01560-202ENST00000624822 MRPL54Q6P161 138 aaKnown RBP6.5□□□□□ -1.37
LINC01560-202ENST00000624822 KCNIP4Q6PIL6 250 aa6.5□□□□□ -1.37
LINC01560-202ENST00000624822 LINC00336Q6ZUF6 198 aa6.5□□□□□ -1.37
LINC01560-202ENST00000624822 DAZ4Q86SG3 579 aaKnown RBP6.5□□□□□ -1.37
LINC01560-202ENST00000624822 C10orf126Q8N4M7 172 aa6.5□□□□□ -1.37
LINC01560-202ENST00000624822 GATD1Q8NB37 220 aa6.5□□□□□ -1.37
LINC01560-202ENST00000624822 TMEM191AQ9H0A3 160 aa6.5□□□□□ -1.37
LINC01560-202ENST00000624822 DAZ3Q9NR90 486 aaKnown RBP6.5□□□□□ -1.37
LINC01560-202ENST00000624822 TRBV6-8A0A0A6YYG3 113 aa6.49□□□□□ -1.37
LINC01560-202ENST00000624822 TMEM97Q5BJF2 176 aa6.49□□□□□ -1.37
LINC01560-202ENST00000624822 LINC01556Q5JQF7 62 aa6.49□□□□□ -1.37
LINC01560-202ENST00000624822 AMN1Q8IY45 258 aa6.49□□□□□ -1.37
LINC01560-202ENST00000624822 RPL39LQ96EH5 51 aaKnown RBP6.49□□□□□ -1.37
LINC01560-202ENST00000624822 SEC11CQ9BY50 192 aa6.49□□□□□ -1.37
LINC01560-202ENST00000624822 TRBV25-1A0A075B6N4 114 aa6.48□□□□□ -1.37
LINC01560-202ENST00000624822 A0A087WX48 190 aa6.48□□□□□ -1.37
LINC01560-202ENST00000624822 A0A1B0GW15 77 aa6.48□□□□□ -1.37
LINC01560-202ENST00000624822 TMEM262E9PQX1 116 aa6.48□□□□□ -1.37
LINC01560-202ENST00000624822 K7EP13 123 aa6.48□□□□□ -1.37
LINC01560-202ENST00000624822 S100A8P05109 93 aa6.48□□□□□ -1.37
LINC01560-202ENST00000624822 HBBP68871 147 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms