RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 TRBV20OR9-2A0A075B6H5 130 aa8.33□□□□□ -1.08
CBWD3-218ENST00000622755 A0A1B0GVG6 124 aa8.33□□□□□ -1.08
CBWD3-218ENST00000622755 TMEM262E9PQX1 116 aa8.33□□□□□ -1.08
CBWD3-218ENST00000622755 GATCO43716 136 aaKnown RBP8.33□□□□□ -1.08
CBWD3-218ENST00000622755 UBE2D3P61077 147 aa8.33□□□□□ -1.08
CBWD3-218ENST00000622755 UBE2D2P62837 147 aa8.33□□□□□ -1.08
CBWD3-218ENST00000622755 LCE2AQ5TA79 106 aaPredicted RBP8.33□□□□□ -1.08
CBWD3-218ENST00000622755 WDR73Q6P4I2 378 aa8.33□□□□□ -1.08
CBWD3-218ENST00000622755 DAZ4Q86SG3 579 aaKnown RBP8.33□□□□□ -1.08
CBWD3-218ENST00000622755 OCC1Q8TAD7 63 aa8.33□□□□□ -1.08
CBWD3-218ENST00000622755 DNAJC30Q96LL9 226 aa8.33□□□□□ -1.08
CBWD3-218ENST00000622755 SMIM7Q9BQ49 75 aa8.33□□□□□ -1.08
CBWD3-218ENST00000622755 DPH3P1Q9H4G8 78 aa8.33□□□□□ -1.08
CBWD3-218ENST00000622755 DAZ3Q9NR90 486 aaKnown RBP8.33□□□□□ -1.08
CBWD3-218ENST00000622755 A8MWL6 223 aa8.32□□□□□ -1.08
CBWD3-218ENST00000622755 SMCPP49901 116 aaPredicted RBP8.32□□□□□ -1.08
CBWD3-218ENST00000622755 TWIST1Q15672 202 aa8.32□□□□□ -1.08
CBWD3-218ENST00000622755 LYZL1Q6UWQ5 148 aa8.32□□□□□ -1.08
CBWD3-218ENST00000622755 NEXN-AS1Q8NBZ9 246 aa8.32□□□□□ -1.08
CBWD3-218ENST00000622755 FAM210AQ96ND0 272 aa8.32□□□□□ -1.08
CBWD3-218ENST00000622755 RNASE7Q9H1E1 156 aaKnown RBP8.32□□□□□ -1.08
CBWD3-218ENST00000622755 HECTD4Q9Y4D8 3996 aa8.32□□□□□ -1.08
CBWD3-218ENST00000622755 A0A087WTM6 91 aa8.31□□□□□ -1.08
CBWD3-218ENST00000622755 ZNF727A8MUV8 499 aa8.31□□□□□ -1.08
CBWD3-218ENST00000622755 CRPP02741 224 aa8.31□□□□□ -1.08
CBWD3-218ENST00000622755 NTF3P20783 257 aa8.31□□□□□ -1.08
CBWD3-218ENST00000622755 TRBV25-1A0A075B6N4 114 aa8.3□□□□□ -1.08
CBWD3-218ENST00000622755 TRBV6-8A0A0A6YYG3 113 aa8.3□□□□□ -1.08
CBWD3-218ENST00000622755 CDK2AP2O75956 126 aa8.3□□□□□ -1.08
CBWD3-218ENST00000622755 CTRLP40313 264 aa8.3□□□□□ -1.08
CBWD3-218ENST00000622755 Q0VG73 95 aa8.3□□□□□ -1.08
CBWD3-218ENST00000622755 NIT1Q86X76 327 aa8.3□□□□□ -1.08
CBWD3-218ENST00000622755 C15orf54Q8N8G6 183 aa8.3□□□□□ -1.08
CBWD3-218ENST00000622755 CHCHD5Q9BSY4 110 aa8.3□□□□□ -1.08
CBWD3-218ENST00000622755 PEA15Q15121 130 aa8.29□□□□□ -1.08
CBWD3-218ENST00000622755 FAM74A3Q4VXF1 159 aa8.29□□□□□ -1.08
CBWD3-218ENST00000622755 RASL11AQ6T310 242 aa8.29□□□□□ -1.08
CBWD3-218ENST00000622755 FAM231DQ6ZW35 169 aa8.29□□□□□ -1.08
CBWD3-218ENST00000622755 Q9UF83 564 aa8.29□□□□□ -1.08
CBWD3-218ENST00000622755 K7EN84 100 aa8.29□□□□□ -1.08
CBWD3-218ENST00000622755 ODF1Q14990 250 aa8.29□□□□□ -1.08
CBWD3-218ENST00000622755 CT83Q5H943 113 aa8.29□□□□□ -1.08
CBWD3-218ENST00000622755 SUMO4Q6EEV6 95 aa8.29□□□□□ -1.08
CBWD3-218ENST00000622755 TEX261Q6UWH6 196 aa8.29□□□□□ -1.08
CBWD3-218ENST00000622755 NTN5Q8WTR8 489 aaPredicted RBP8.29□□□□□ -1.08
CBWD3-218ENST00000622755 KLK12Q9UKR0 248 aa8.29□□□□□ -1.08
CBWD3-218ENST00000622755 KIF25-AS1Q9Y6Z4 181 aa8.29□□□□□ -1.08
CBWD3-218ENST00000622755 DNAH2Q9P225 4427 aa8.28□□□□□ -1.08
CBWD3-218ENST00000622755 IGKV2D-24A0A075B6R9 120 aa8.28□□□□□ -1.08
CBWD3-218ENST00000622755 KRTAP10-2P60368 255 aa8.28□□□□□ -1.08
CBWD3-218ENST00000622755 ANKRD39Q53RE8 183 aa8.28□□□□□ -1.08
CBWD3-218ENST00000622755 FRZBQ92765 325 aa8.28□□□□□ -1.08
CBWD3-218ENST00000622755 UBE2WQ96B02 151 aa8.28□□□□□ -1.08
CBWD3-218ENST00000622755 NIT2Q9NQR4 276 aa8.28□□□□□ -1.08
CBWD3-218ENST00000622755 IGLV5-52A0A0A0MRZ9 124 aa8.27□□□□□ -1.09
CBWD3-218ENST00000622755 IGHV1-24A0A0C4DH33 117 aa8.27□□□□□ -1.09
CBWD3-218ENST00000622755 M0QY20 66 aa8.27□□□□□ -1.09
CBWD3-218ENST00000622755 UBE2L6O14933 153 aa8.27□□□□□ -1.09
CBWD3-218ENST00000622755 ANGP03950 147 aaKnown RBP8.27□□□□□ -1.09
CBWD3-218ENST00000622755 C1orf43Q9BWL3 253 aa8.27□□□□□ -1.09
CBWD3-218ENST00000622755 CNFNQ9BYD5 112 aa8.27□□□□□ -1.09
CBWD3-218ENST00000622755 SMDT1Q9H4I9 107 aa8.27□□□□□ -1.09
CBWD3-218ENST00000622755 FAT2Q9NYQ8 4349 aa8.26□□□□□ -1.09
CBWD3-218ENST00000622755 DNAH17Q9UFH2 4485 aa8.26□□□□□ -1.09
CBWD3-218ENST00000622755 EIF4EBP3O60516 100 aaPredicted RBP8.26□□□□□ -1.09
CBWD3-218ENST00000622755 SRP19P09132 144 aaKnown RBP8.26□□□□□ -1.09
CBWD3-218ENST00000622755 RAB14P61106 215 aa8.26□□□□□ -1.09
CBWD3-218ENST00000622755 TMEM241Q24JQ0 296 aa8.26□□□□□ -1.09
CBWD3-218ENST00000622755 LINC01551Q86U37 167 aa8.26□□□□□ -1.09
CBWD3-218ENST00000622755 PGLYRP4Q96LB8 373 aa8.26□□□□□ -1.09
CBWD3-218ENST00000622755 GFRA4Q9GZZ7 299 aa8.26□□□□□ -1.09
CBWD3-218ENST00000622755 FAM231BA6NCW3 169 aa8.25□□□□□ -1.09
CBWD3-218ENST00000622755 GCSHP23434 173 aa8.25□□□□□ -1.09
CBWD3-218ENST00000622755 COTL1Q14019 142 aa8.25□□□□□ -1.09
CBWD3-218ENST00000622755 Q8N814 137 aa8.25□□□□□ -1.09
CBWD3-218ENST00000622755 TSKUQ8WUA8 353 aa8.25□□□□□ -1.09
CBWD3-218ENST00000622755 OSTCQ9NRP0 149 aa8.25□□□□□ -1.09
CBWD3-218ENST00000622755 Q8N3U1 123 aa8.24□□□□□ -1.09
CBWD3-218ENST00000622755 CLRN3Q8NCR9 226 aa8.24□□□□□ -1.09
CBWD3-218ENST00000622755 TMEM243Q9BU79 118 aa8.24□□□□□ -1.09
CBWD3-218ENST00000622755 NAT8Q9UHE5 227 aa8.24□□□□□ -1.09
CBWD3-218ENST00000622755 A0A1B0GUT8 65 aa8.23□□□□□ -1.09
CBWD3-218ENST00000622755 HIGD1CA8MV81 97 aa8.23□□□□□ -1.09
CBWD3-218ENST00000622755 RIGQ13278 110 aa8.23□□□□□ -1.09
CBWD3-218ENST00000622755 ADIRFQ15847 76 aa8.23□□□□□ -1.09
CBWD3-218ENST00000622755 MIAQ16674 131 aa8.23□□□□□ -1.09
CBWD3-218ENST00000622755 IQCJQ1A5X6 159 aa8.23□□□□□ -1.09
CBWD3-218ENST00000622755 C14orf177Q52M58 125 aa8.23□□□□□ -1.09
CBWD3-218ENST00000622755 MAPKAPK5-AS1Q8N8E1 139 aa8.23□□□□□ -1.09
CBWD3-218ENST00000622755 Q8N976 141 aa8.23□□□□□ -1.09
CBWD3-218ENST00000622755 GTSF1Q8WW33 167 aa8.23□□□□□ -1.09
CBWD3-218ENST00000622755 LRCOL1A6NCL2 159 aa8.22□□□□□ -1.09
CBWD3-218ENST00000622755 AMTP48728 403 aa8.22□□□□□ -1.09
CBWD3-218ENST00000622755 FOXA3P55318 350 aaPredicted RBP8.22□□□□□ -1.09
CBWD3-218ENST00000622755 GAGE6Q13070 117 aa8.22□□□□□ -1.09
CBWD3-218ENST00000622755 MPV17L2Q567V2 206 aa8.22□□□□□ -1.09
CBWD3-218ENST00000622755 ATRAIDQ6UW56 229 aa8.22□□□□□ -1.09
CBWD3-218ENST00000622755 PKD1P98161 4303 aa8.22□□□□□ -1.09
CBWD3-218ENST00000622755 NCR2O95944 276 aa8.2□□□□□ -1.1
CBWD3-218ENST00000622755 NTM-AS1Q6ZSK4 140 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms