RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 NXPH4O95158 308 aa6.73□□□□□ -1.33
HDAC9-229ENST00000622668 PFN2P35080 140 aa6.73□□□□□ -1.33
HDAC9-229ENST00000622668 CT83Q5H943 113 aa6.73□□□□□ -1.33
HDAC9-229ENST00000622668 C11orf52Q96A22 123 aa6.73□□□□□ -1.33
HDAC9-229ENST00000622668 CARHSP1Q9Y2V2 147 aaKnown RBP6.73□□□□□ -1.33
HDAC9-229ENST00000622668 ITPR1Q14643 2758 aa6.73□□□□□ -1.33
HDAC9-229ENST00000622668 CRYGDP07320 174 aa6.73□□□□□ -1.33
HDAC9-229ENST00000622668 MUC4Q99102 2169 aa6.72□□□□□ -1.33
HDAC9-229ENST00000622668 A6NDN8 102 aa6.72□□□□□ -1.33
HDAC9-229ENST00000622668 MRPL51Q4U2R6 128 aaKnown RBP6.72□□□□□ -1.33
HDAC9-229ENST00000622668 DCANP1Q8TF63 244 aa6.72□□□□□ -1.33
HDAC9-229ENST00000622668 TRAV4A0A0B4J268 109 aa6.72□□□□□ -1.33
HDAC9-229ENST00000622668 hDV102S1A0JD36 115 aa6.72□□□□□ -1.33
HDAC9-229ENST00000622668 SERF1AO75920 110 aa6.72□□□□□ -1.33
HDAC9-229ENST00000622668 P0DMU3 169 aa6.72□□□□□ -1.33
HDAC9-229ENST00000622668 FAM231AP0DMU4 169 aa6.72□□□□□ -1.33
HDAC9-229ENST00000622668 FAM231CP0DMU5 169 aa6.72□□□□□ -1.33
HDAC9-229ENST00000622668 CST9LQ9H4G1 147 aa6.72□□□□□ -1.33
HDAC9-229ENST00000622668 CIDEAO60543 219 aa6.72□□□□□ -1.33
HDAC9-229ENST00000622668 ZNF580Q9UK33 172 aa6.72□□□□□ -1.33
HDAC9-229ENST00000622668 AGRNO00468 2067 aa6.72□□□□□ -1.33
HDAC9-229ENST00000622668 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.71□□□□□ -1.33
HDAC9-229ENST00000622668 Q6ZTC4 211 aa6.71□□□□□ -1.33
HDAC9-229ENST00000622668 SNAI2O43623 268 aa6.71□□□□□ -1.34
HDAC9-229ENST00000622668 SIVA1O15304 175 aa6.71□□□□□ -1.34
HDAC9-229ENST00000622668 COX6CP09669 75 aa6.71□□□□□ -1.34
HDAC9-229ENST00000622668 DAZ2Q13117 558 aaKnown RBP6.71□□□□□ -1.34
HDAC9-229ENST00000622668 SUMO4Q6EEV6 95 aa6.71□□□□□ -1.34
HDAC9-229ENST00000622668 DAZ4Q86SG3 579 aaKnown RBP6.71□□□□□ -1.34
HDAC9-229ENST00000622668 NKAPP1Q8N9T2 125 aa6.71□□□□□ -1.34
HDAC9-229ENST00000622668 CAMK2N2Q96S95 79 aa6.71□□□□□ -1.34
HDAC9-229ENST00000622668 SMIM2Q9BVW6 85 aa6.71□□□□□ -1.34
HDAC9-229ENST00000622668 DAZ3Q9NR90 486 aaKnown RBP6.71□□□□□ -1.34
HDAC9-229ENST00000622668 GATA1P15976 413 aaPredicted RBP6.7□□□□□ -1.34
HDAC9-229ENST00000622668 NPC2P61916 151 aa6.7□□□□□ -1.34
HDAC9-229ENST00000622668 FAM231DQ6ZW35 169 aa6.7□□□□□ -1.34
HDAC9-229ENST00000622668 MRPS16Q9Y3D3 137 aaKnown RBP6.7□□□□□ -1.34
HDAC9-229ENST00000622668 DPM2O94777 84 aa6.7□□□□□ -1.34
HDAC9-229ENST00000622668 KRTAP1-1Q07627 177 aa6.7□□□□□ -1.34
HDAC9-229ENST00000622668 RPL39LQ96EH5 51 aaKnown RBP6.7□□□□□ -1.34
HDAC9-229ENST00000622668 PRO1933Q9H354 126 aa6.7□□□□□ -1.34
HDAC9-229ENST00000622668 TMEM238LA0A1B0GVL6 79 aa6.7□□□□□ -1.34
HDAC9-229ENST00000622668 A6NJY4 79 aa6.7□□□□□ -1.34
HDAC9-229ENST00000622668 LINC01559Q495D7 138 aa6.7□□□□□ -1.34
HDAC9-229ENST00000622668 ATRAIDQ6UW56 229 aa6.7□□□□□ -1.34
HDAC9-229ENST00000622668 LAMTOR2Q9Y2Q5 125 aa6.7□□□□□ -1.34
HDAC9-229ENST00000622668 C9JQL5 133 aa6.69□□□□□ -1.34
HDAC9-229ENST00000622668 RPL18AQ02543 176 aaKnown RBP6.69□□□□□ -1.34
HDAC9-229ENST00000622668 NSD1Q96L73 2696 aaPredicted RBP6.69□□□□□ -1.34
HDAC9-229ENST00000622668 NBEAQ8NFP9 2946 aa6.69□□□□□ -1.34
HDAC9-229ENST00000622668 TRAV8-2A0A0B4J237 113 aa6.69□□□□□ -1.34
HDAC9-229ENST00000622668 LOC107984156A0A0G2JMH3 177 aa6.69□□□□□ -1.34
HDAC9-229ENST00000622668 ARL17AQ8IVW1 177 aa6.69□□□□□ -1.34
HDAC9-229ENST00000622668 ODF3Q96PU9 254 aa6.69□□□□□ -1.34
HDAC9-229ENST00000622668 DNAL4O96015 105 aa6.69□□□□□ -1.34
HDAC9-229ENST00000622668 NPYP01303 97 aa6.69□□□□□ -1.34
HDAC9-229ENST00000622668 ZNF80P51504 273 aaPredicted RBP6.69□□□□□ -1.34
HDAC9-229ENST00000622668 EDA2RQ9HAV5 297 aa6.69□□□□□ -1.34
HDAC9-229ENST00000622668 HIVEP1P15822 2718 aa6.69□□□□□ -1.34
HDAC9-229ENST00000622668 IGKV2-24A0A0C4DH68 120 aa6.68□□□□□ -1.34
HDAC9-229ENST00000622668 GAGE2BQ13066 116 aa6.68□□□□□ -1.34
HDAC9-229ENST00000622668 VAMP3Q15836 100 aa6.68□□□□□ -1.34
HDAC9-229ENST00000622668 LGALS9BQ3B8N2 356 aa6.68□□□□□ -1.34
HDAC9-229ENST00000622668 DNLZQ5SXM8 178 aa6.68□□□□□ -1.34
HDAC9-229ENST00000622668 DNAJC30Q96LL9 226 aa6.68□□□□□ -1.34
HDAC9-229ENST00000622668 TIMM21Q9BVV7 248 aa6.68□□□□□ -1.34
HDAC9-229ENST00000622668 LECT2O14960 151 aa6.68□□□□□ -1.34
HDAC9-229ENST00000622668 SLC25A20O43772 301 aa6.68□□□□□ -1.34
HDAC9-229ENST00000622668 CHAC1Q9BUX1 264 aa6.68□□□□□ -1.34
HDAC9-229ENST00000622668 RBMY1BA6NDE4 496 aaKnown RBP6.68□□□□□ -1.34
HDAC9-229ENST00000622668 RBMY1EA6NEQ0 496 aaKnown RBP6.68□□□□□ -1.34
HDAC9-229ENST00000622668 LINC00587B1AMM8 73 aa6.68□□□□□ -1.34
HDAC9-229ENST00000622668 RBMY1DP0C7P1 496 aaKnown RBP6.68□□□□□ -1.34
HDAC9-229ENST00000622668 RBMY1A1P0DJD3 496 aaKnown RBP6.68□□□□□ -1.34
HDAC9-229ENST00000622668 RBMY1CP0DJD4 496 aa6.68□□□□□ -1.34
HDAC9-229ENST00000622668 FHL3Q13643 280 aa6.68□□□□□ -1.34
HDAC9-229ENST00000622668 SBSPONQ8IVN8 264 aa6.68□□□□□ -1.34
HDAC9-229ENST00000622668 V9GYV3 84 aa6.68□□□□□ -1.34
HDAC9-229ENST00000622668 FGF6P10767 208 aa6.67□□□□□ -1.34
HDAC9-229ENST00000622668 PLNP26678 52 aa6.67□□□□□ -1.34
HDAC9-229ENST00000622668 GAGE2EQ4V326 116 aa6.67□□□□□ -1.34
HDAC9-229ENST00000622668 GAGE2DQ9UEU5 116 aa6.67□□□□□ -1.34
HDAC9-229ENST00000622668 TRBV10-1A0A0K0K1A3 114 aa6.67□□□□□ -1.34
HDAC9-229ENST00000622668 JOSD1Q15040 202 aaPredicted RBP6.67□□□□□ -1.34
HDAC9-229ENST00000622668 ZFAND2AQ8N6M9 145 aa6.67□□□□□ -1.34
HDAC9-229ENST00000622668 CFAP47Q6ZTR5 3102 aa6.67□□□□□ -1.34
HDAC9-229ENST00000622668 ZNF815PA8K554 130 aa6.67□□□□□ -1.34
HDAC9-229ENST00000622668 LYRM7Q5U5X0 104 aa6.67□□□□□ -1.34
HDAC9-229ENST00000622668 GTSF1LQ9H1H1 148 aa6.67□□□□□ -1.34
HDAC9-229ENST00000622668 TRAV8-3A0A0A6YYJ7 113 aa6.67□□□□□ -1.34
HDAC9-229ENST00000622668 M0R143 59 aa6.67□□□□□ -1.34
HDAC9-229ENST00000622668 SMIM13P0DJ93 91 aa6.67□□□□□ -1.34
HDAC9-229ENST00000622668 COX7A2LO14548 114 aa6.66□□□□□ -1.34
HDAC9-229ENST00000622668 K7EN84 100 aa6.66□□□□□ -1.34
HDAC9-229ENST00000622668 IGKCP01834 107 aa6.66□□□□□ -1.34
HDAC9-229ENST00000622668 CXCL1P09341 107 aa6.66□□□□□ -1.34
HDAC9-229ENST00000622668 Q8N8P6 123 aa6.66□□□□□ -1.34
HDAC9-229ENST00000622668 SLC25A29Q8N8R3 303 aa6.66□□□□□ -1.34
HDAC9-229ENST00000622668 CHCHD1Q96BP2 118 aaKnown RBP6.66□□□□□ -1.34
HDAC9-229ENST00000622668 WWC2-AS2Q96NR7 200 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms