RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 GTSF1Q8WW33 167 aa12.22□□□□□ -0.45
SCAMP4-213ENST00000621748 APOBP04114 4563 aaKnown RBP12.21□□□□□ -0.45
SCAMP4-213ENST00000621748 IGHV3-73A0A0B4J1V6 119 aa12.21□□□□□ -0.45
SCAMP4-213ENST00000621748 SMIM27A0A1W2PRY6 76 aa12.21□□□□□ -0.45
SCAMP4-213ENST00000621748 C7orf77A4D0Y5 90 aa12.21□□□□□ -0.45
SCAMP4-213ENST00000621748 S100A8P05109 93 aa12.21□□□□□ -0.45
SCAMP4-213ENST00000621748 NTF3P20783 257 aa12.21□□□□□ -0.45
SCAMP4-213ENST00000621748 FAM74A4Q5TZK3 123 aa12.21□□□□□ -0.45
SCAMP4-213ENST00000621748 SPATA12Q7Z6I5 190 aa12.21□□□□□ -0.45
SCAMP4-213ENST00000621748 NUP35Q8NFH5 326 aa12.2□□□□□ -0.46
SCAMP4-213ENST00000621748 IMMP2LQ96T52 175 aa12.2□□□□□ -0.46
SCAMP4-213ENST00000621748 A0A087WWC5 75 aa12.19□□□□□ -0.46
SCAMP4-213ENST00000621748 A0A1B0GW15 77 aa12.19□□□□□ -0.46
SCAMP4-213ENST00000621748 F5H697 171 aa12.19□□□□□ -0.46
SCAMP4-213ENST00000621748 ZFP2Q6ZN57 461 aa12.19□□□□□ -0.46
SCAMP4-213ENST00000621748 TMEM242Q9NWH2 141 aa12.19□□□□□ -0.46
SCAMP4-213ENST00000621748 TRBV6-4A0A1B0GX49 114 aa12.18□□□□□ -0.46
SCAMP4-213ENST00000621748 KRTAP10-2P60368 255 aa12.18□□□□□ -0.46
SCAMP4-213ENST00000621748 SH2D6Q7Z4S9 175 aa12.18□□□□□ -0.46
SCAMP4-213ENST00000621748 C14orf178Q8N769 122 aaPredicted RBP12.18□□□□□ -0.46
SCAMP4-213ENST00000621748 TRAV9-2A0A087WT02 112 aa12.17□□□□□ -0.46
SCAMP4-213ENST00000621748 A0A087WWL8 130 aa12.17□□□□□ -0.46
SCAMP4-213ENST00000621748 MGPP08493 103 aa12.17□□□□□ -0.46
SCAMP4-213ENST00000621748 DNAH10OSP0CZ25 163 aa12.17□□□□□ -0.46
SCAMP4-213ENST00000621748 TIRAPP58753 221 aa12.17□□□□□ -0.46
SCAMP4-213ENST00000621748 RHOHQ15669 191 aa12.17□□□□□ -0.46
SCAMP4-213ENST00000621748 ZNF56Q15929 161 aa12.17□□□□□ -0.46
SCAMP4-213ENST00000621748 Q6ZSN1 163 aa12.17□□□□□ -0.46
SCAMP4-213ENST00000621748 BTF3L4Q96K17 158 aa12.17□□□□□ -0.46
SCAMP4-213ENST00000621748 PRADC1Q9BSG0 188 aa12.17□□□□□ -0.46
SCAMP4-213ENST00000621748 CNFNQ9BYD5 112 aa12.16□□□□□ -0.46
SCAMP4-213ENST00000621748 DPH3P1Q9H4G8 78 aa12.16□□□□□ -0.46
SCAMP4-213ENST00000621748 JPT2Q9H910 190 aa12.16□□□□□ -0.46
SCAMP4-213ENST00000621748 EVI2AP22794 236 aa12.15□□□□□ -0.46
SCAMP4-213ENST00000621748 CAMPP49913 170 aa12.15□□□□□ -0.46
SCAMP4-213ENST00000621748 ATP5L2Q7Z4Y8 100 aa12.15□□□□□ -0.46
SCAMP4-213ENST00000621748 TRAV9-1A0A075B6T8 112 aa12.14□□□□□ -0.47
SCAMP4-213ENST00000621748 H7C1H1 209 aa12.14□□□□□ -0.47
SCAMP4-213ENST00000621748 K7EP13 123 aa12.14□□□□□ -0.47
SCAMP4-213ENST00000621748 RAB4BP61018 213 aa12.14□□□□□ -0.47
SCAMP4-213ENST00000621748 HBBP68871 147 aa12.14□□□□□ -0.47
SCAMP4-213ENST00000621748 UFSP1Q6NVU6 142 aa12.14□□□□□ -0.47
SCAMP4-213ENST00000621748 MRPL54Q6P161 138 aaKnown RBP12.14□□□□□ -0.47
SCAMP4-213ENST00000621748 SAMD10Q9BYL1 202 aa12.14□□□□□ -0.47
SCAMP4-213ENST00000621748 MSRB1Q9NZV6 116 aa12.14□□□□□ -0.47
SCAMP4-213ENST00000621748 ABCA13Q86UQ4 5058 aa12.13□□□□□ -0.47
SCAMP4-213ENST00000621748 IGHV3-38A0A0C4DH36 116 aa12.13□□□□□ -0.47
SCAMP4-213ENST00000621748 NFE4Q86UQ8 179 aa12.13□□□□□ -0.47
SCAMP4-213ENST00000621748 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-213ENST00000621748 Q9UF83 564 aa12.13□□□□□ -0.47
SCAMP4-213ENST00000621748 CDK2AP2O75956 126 aa12.12□□□□□ -0.47
SCAMP4-213ENST00000621748 CRYGDP07320 174 aa12.12□□□□□ -0.47
SCAMP4-213ENST00000621748 ATP6V0E2Q8NHE4 81 aa12.12□□□□□ -0.47
SCAMP4-213ENST00000621748 URGCP-MRPS24S4R325 110 aa12.12□□□□□ -0.47
SCAMP4-213ENST00000621748 S100A1P23297 94 aa12.11□□□□□ -0.47
SCAMP4-213ENST00000621748 TMEM191AQ9H0A3 160 aa12.11□□□□□ -0.47
SCAMP4-213ENST00000621748 TRAV8-6A0A0B4J262 113 aa12.1□□□□□ -0.47
SCAMP4-213ENST00000621748 FUSP35637 526 aaKnown RBP eCLIP12.1□□□□□ -0.47
SCAMP4-213ENST00000621748 LINC01556Q5JQF7 62 aa12.1□□□□□ -0.47
SCAMP4-213ENST00000621748 OR10J3Q5JRS4 329 aa12.1□□□□□ -0.47
SCAMP4-213ENST00000621748 LELP1Q5T871 98 aa12.1□□□□□ -0.47
SCAMP4-213ENST00000621748 C10orf126Q8N4M7 172 aa12.1□□□□□ -0.47
SCAMP4-213ENST00000621748 GTSF1LQ9H1H1 148 aa12.1□□□□□ -0.47
SCAMP4-213ENST00000621748 SMCO4Q9NRQ5 59 aa12.1□□□□□ -0.47
SCAMP4-213ENST00000621748 GAGE12JA6NER3 117 aa12.09□□□□□ -0.47
SCAMP4-213ENST00000621748 LINC00694P0DN24 101 aa12.09□□□□□ -0.47
SCAMP4-213ENST00000621748 GAGE1Q13065 139 aa12.09□□□□□ -0.47
SCAMP4-213ENST00000621748 GAGE4Q13068 117 aa12.09□□□□□ -0.47
SCAMP4-213ENST00000621748 GAGE5Q13069 117 aa12.09□□□□□ -0.47
SCAMP4-213ENST00000621748 GAGE13Q4V321 117 aa12.09□□□□□ -0.47
SCAMP4-213ENST00000621748 RASL11AQ6T310 242 aa12.09□□□□□ -0.47
SCAMP4-213ENST00000621748 KRTAP4-5Q9BYR2 181 aa12.09□□□□□ -0.47
SCAMP4-213ENST00000621748 A0A087WTM6 91 aa12.08□□□□□ -0.48
SCAMP4-213ENST00000621748 TRBV10-1A0A0K0K1A3 114 aa12.08□□□□□ -0.48
SCAMP4-213ENST00000621748 RPL36AP83881 106 aaKnown RBP12.08□□□□□ -0.48
SCAMP4-213ENST00000621748 COX19Q49B96 90 aa12.08□□□□□ -0.48
SCAMP4-213ENST00000621748 FRZBQ92765 325 aa12.08□□□□□ -0.48
SCAMP4-213ENST00000621748 RPL36ALQ969Q0 106 aaKnown RBP12.08□□□□□ -0.48
SCAMP4-213ENST00000621748 PGPEP1Q9NXJ5 209 aa12.07□□□□□ -0.48
SCAMP4-213ENST00000621748 KIF25-AS1Q9Y6Z4 181 aa12.07□□□□□ -0.48
SCAMP4-213ENST00000621748 IBA57-AS1B1ANH7 110 aa12.06□□□□□ -0.48
SCAMP4-213ENST00000621748 EREGO14944 169 aa12.06□□□□□ -0.48
SCAMP4-213ENST00000621748 PPP1R17O96001 155 aa12.06□□□□□ -0.48
SCAMP4-213ENST00000621748 IGHV3-30P01768 117 aa12.06□□□□□ -0.48
SCAMP4-213ENST00000621748 IGHV3-33P01772 117 aa12.06□□□□□ -0.48
SCAMP4-213ENST00000621748 IGHV3-30-3P0DP02 117 aa12.06□□□□□ -0.48
SCAMP4-213ENST00000621748 IGHV3-30-5P0DP03 117 aa12.06□□□□□ -0.48
SCAMP4-213ENST00000621748 SUMO4Q6EEV6 95 aa12.06□□□□□ -0.48
SCAMP4-213ENST00000621748 MRAP2Q96G30 205 aa12.06□□□□□ -0.48
SCAMP4-213ENST00000621748 AMN1Q8IY45 258 aa12.05□□□□□ -0.48
SCAMP4-213ENST00000621748 DNAJC30Q96LL9 226 aa12.05□□□□□ -0.48
SCAMP4-213ENST00000621748 A0A1B0GXF2 115 aa12.04□□□□□ -0.48
SCAMP4-213ENST00000621748 CKS2P33552 79 aa12.04□□□□□ -0.48
SCAMP4-213ENST00000621748 FAM104BQ5XKR9 115 aa12.04□□□□□ -0.48
SCAMP4-213ENST00000621748 ATRAIDQ6UW56 229 aa12.04□□□□□ -0.48
SCAMP4-213ENST00000621748 Q8N3U1 123 aa12.04□□□□□ -0.48
SCAMP4-213ENST00000621748 ATP6V1G1O75348 118 aa12.03□□□□□ -0.48
SCAMP4-213ENST00000621748 RAB4AP20338 218 aa12.03□□□□□ -0.48
SCAMP4-213ENST00000621748 MAPKAPK5-AS1Q8N8E1 139 aa12.03□□□□□ -0.48
SCAMP4-213ENST00000621748 Q9HAA7 133 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms